RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 Q6AWC8 147 aa11.47□□□□□ -0.57
CCDC12-211ENST00000604367 RNASEKQ6P5S7 137 aaKnown RBP11.47□□□□□ -0.57
CCDC12-211ENST00000604367 LOC102724200A0A096LPH7 203 aaPredicted RBP11.46□□□□□ -0.57
CCDC12-211ENST00000604367 IGHV7-4-1A0A0J9YVY3 117 aa11.46□□□□□ -0.57
CCDC12-211ENST00000604367 J3QKU1 62 aa11.46□□□□□ -0.57
CCDC12-211ENST00000604367 ZNF138P52744 262 aa11.46□□□□□ -0.57
CCDC12-211ENST00000604367 ZNF702PQ9H963 129 aa11.46□□□□□ -0.57
CCDC12-211ENST00000604367 RNF114Q9Y508 228 aa11.46□□□□□ -0.57
CCDC12-211ENST00000604367 HSBP1O75506 76 aa11.46□□□□□ -0.58
CCDC12-211ENST00000604367 NRN1Q9NPD7 142 aa11.46□□□□□ -0.58
CCDC12-211ENST00000604367 NAGKQ9UJ70 344 aa11.46□□□□□ -0.58
CCDC12-211ENST00000604367 FLNAP21333 2647 aaKnown RBP11.46□□□□□ -0.58
CCDC12-211ENST00000604367 TMEM213A2RRL7 107 aa11.45□□□□□ -0.58
CCDC12-211ENST00000604367 FAM106AQ4KMX7 169 aa11.45□□□□□ -0.58
CCDC12-211ENST00000604367 MRPL53Q96EL3 112 aaKnown RBP11.45□□□□□ -0.58
CCDC12-211ENST00000604367 PSMG3-AS1Q96PY0 264 aa11.45□□□□□ -0.58
CCDC12-211ENST00000604367 MYO9AB2RTY4 2548 aa11.45□□□□□ -0.58
CCDC12-211ENST00000604367 FASNP49327 2511 aaKnown RBP11.45□□□□□ -0.58
CCDC12-211ENST00000604367 HSBP1L1C9JCN9 74 aa11.45□□□□□ -0.58
CCDC12-211ENST00000604367 KRTDAPP60985 99 aa11.45□□□□□ -0.58
CCDC12-211ENST00000604367 NIT1Q86X76 327 aa11.45□□□□□ -0.58
CCDC12-211ENST00000604367 ZNF664Q8N3J9 261 aa11.45□□□□□ -0.58
CCDC12-211ENST00000604367 FER1L6-AS1Q8NA97 138 aa11.45□□□□□ -0.58
CCDC12-211ENST00000604367 C9orf47Q6ZRZ4 202 aa11.44□□□□□ -0.58
CCDC12-211ENST00000604367 ZNF575Q86XF7 245 aa11.44□□□□□ -0.58
CCDC12-211ENST00000604367 FAM181BA6NEQ2 426 aa11.44□□□□□ -0.58
CCDC12-211ENST00000604367 SOCS3O14543 225 aa11.44□□□□□ -0.58
CCDC12-211ENST00000604367 Q6ZQT7 251 aa11.44□□□□□ -0.58
CCDC12-211ENST00000604367 SMPXQ9UHP9 88 aa11.44□□□□□ -0.58
CCDC12-211ENST00000604367 TSTD3H0UI37 97 aa11.43□□□□□ -0.58
CCDC12-211ENST00000604367 RPS20P60866 119 aaKnown RBP11.43□□□□□ -0.58
CCDC12-211ENST00000604367 PKIAP61925 76 aa11.43□□□□□ -0.58
CCDC12-211ENST00000604367 URB1-AS1Q96HZ7 61 aa11.43□□□□□ -0.58
CCDC12-211ENST00000604367 CLEC5AQ9NY25 188 aa11.43□□□□□ -0.58
CCDC12-211ENST00000604367 F6UB75 175 aa11.43□□□□□ -0.58
CCDC12-211ENST00000604367 FOXE3Q13461 319 aa11.43□□□□□ -0.58
CCDC12-211ENST00000604367 TWIST1Q15672 202 aa11.43□□□□□ -0.58
CCDC12-211ENST00000604367 A0A1B0GW15 77 aa11.42□□□□□ -0.58
CCDC12-211ENST00000604367 PMCHL1Q16048 86 aa11.42□□□□□ -0.58
CCDC12-211ENST00000604367 C11orf21Q9P2W6 132 aa11.42□□□□□ -0.58
CCDC12-211ENST00000604367 ITPR2Q14571 2701 aa11.42□□□□□ -0.58
CCDC12-211ENST00000604367 IGKV3D-20A0A0C4DH25 116 aa11.41□□□□□ -0.58
CCDC12-211ENST00000604367 TMEM89A2RUT3 159 aa11.41□□□□□ -0.58
CCDC12-211ENST00000604367 M0R2Z0 102 aa11.41□□□□□ -0.58
CCDC12-211ENST00000604367 CSN3P07498 182 aa11.41□□□□□ -0.58
CCDC12-211ENST00000604367 IGLC6P0CF74 106 aa11.41□□□□□ -0.58
CCDC12-211ENST00000604367 WFDC3Q8IUB2 231 aa11.41□□□□□ -0.58
CCDC12-211ENST00000604367 AMN1Q8IY45 258 aa11.41□□□□□ -0.58
CCDC12-211ENST00000604367 HIST1H1AQ02539 215 aaPredicted RBP11.41□□□□□ -0.58
CCDC12-211ENST00000604367 CUBNO60494 3623 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 K7EMT4 169 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 CTRLP40313 264 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 LINC01559Q495D7 138 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 GATD1Q8NB37 220 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 OR10J6PQ8NGY7 276 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 MSRB1Q9NZV6 116 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 UFC1Q9Y3C8 167 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 ACANP16112 2415 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 PDZD2O15018 2839 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 IGHV4OR15-8A0A075B7B6 117 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 A0A087WW49 117 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 ELANEP08246 267 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 SYNJ2BPP57105 145 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 TDRG1Q3Y452 100 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 PRR9Q5T870 116 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 ZNF493Q6ZR52 646 aa11.4□□□□□ -0.58
CCDC12-211ENST00000604367 TFPI2P48307 235 aa11.39□□□□□ -0.59
CCDC12-211ENST00000604367 SRSF2Q01130 221 aaKnown RBP11.39□□□□□ -0.59
CCDC12-211ENST00000604367 OVOL1O14753 267 aa11.39□□□□□ -0.59
CCDC12-211ENST00000604367 LGALS1P09382 135 aaKnown RBP11.39□□□□□ -0.59
CCDC12-211ENST00000604367 D6R8Y8 96 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 LINC00614P0C842 121 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 C3orf79P0CE67 100 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 DDTP30046 118 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 FAM104BQ5XKR9 115 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 C18orf65Q6ZTR6 163 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 REC114Q7Z4M0 266 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 UBE2E2Q96LR5 201 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 LINC00477Q96M19 166 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 C2orf88Q9BSF0 95 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 DEFB136Q30KP8 78 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 OR8A1Q8NGG7 326 aa11.38□□□□□ -0.59
CCDC12-211ENST00000604367 RAB4AP20338 218 aa11.37□□□□□ -0.59
CCDC12-211ENST00000604367 HOXD3P31249 432 aaPredicted RBP11.37□□□□□ -0.59
CCDC12-211ENST00000604367 HIST2H2BDQ6DRA6 164 aa11.37□□□□□ -0.59
CCDC12-211ENST00000604367 MYOZ3Q8TDC0 251 aa11.37□□□□□ -0.59
CCDC12-211ENST00000604367 IGHV1-24A0A0C4DH33 117 aa11.37□□□□□ -0.59
CCDC12-211ENST00000604367 KLHDC1Q8N7A1 406 aa11.37□□□□□ -0.59
CCDC12-211ENST00000604367 DCANP1Q8TF63 244 aa11.37□□□□□ -0.59
CCDC12-211ENST00000604367 TIMM8BQ9Y5J9 83 aaPredicted RBP11.37□□□□□ -0.59
CCDC12-211ENST00000604367 KIR3DS1Q14943 382 aa11.36□□□□□ -0.59
CCDC12-211ENST00000604367 ZFAND2AQ8N6M9 145 aa11.36□□□□□ -0.59
CCDC12-211ENST00000604367 Q8N976 141 aa11.36□□□□□ -0.59
CCDC12-211ENST00000604367 CHCHD1Q96BP2 118 aaKnown RBP11.36□□□□□ -0.59
CCDC12-211ENST00000604367 LOC389332A0A1B0GUA5 103 aa11.36□□□□□ -0.59
CCDC12-211ENST00000604367 SMKR1H3BMG3 65 aa11.36□□□□□ -0.59
CCDC12-211ENST00000604367 MRPL51Q4U2R6 128 aaKnown RBP11.36□□□□□ -0.59
CCDC12-211ENST00000604367 KHDC1LQ5JSQ8 128 aa11.36□□□□□ -0.59
CCDC12-211ENST00000604367 EBLN2Q6P2I7 272 aa11.36□□□□□ -0.59
CCDC12-211ENST00000604367 MS4A6AQ9H2W1 248 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms