RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 HIST1H2BDP58876 126 aa16.73■□□□□ 0.27
PPFIA3-211ENST00000602848 HIST1H2BCP62807 126 aa16.73■□□□□ 0.27
PPFIA3-211ENST00000602848 HIST2H2BEQ16778 126 aa16.73■□□□□ 0.27
PPFIA3-211ENST00000602848 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.73■□□□□ 0.27
PPFIA3-211ENST00000602848 WFDC3Q8IUB2 231 aa16.73■□□□□ 0.27
PPFIA3-211ENST00000602848 GTSF1Q8WW33 167 aa16.73■□□□□ 0.27
PPFIA3-211ENST00000602848 HIST1H2BHQ93079 126 aa16.73■□□□□ 0.27
PPFIA3-211ENST00000602848 HIST1H2BNQ99877 126 aa16.73■□□□□ 0.27
PPFIA3-211ENST00000602848 HIST1H2BMQ99879 126 aa16.73■□□□□ 0.27
PPFIA3-211ENST00000602848 A0A1W2PRX2 142 aa16.72■□□□□ 0.27
PPFIA3-211ENST00000602848 ZNF80P51504 273 aaPredicted RBP16.72■□□□□ 0.27
PPFIA3-211ENST00000602848 FABP9Q0Z7S8 132 aa16.72■□□□□ 0.27
PPFIA3-211ENST00000602848 TRAV25A0A0B4J276 109 aa16.71■□□□□ 0.27
PPFIA3-211ENST00000602848 FAM19A4Q96LR4 140 aa16.71■□□□□ 0.27
PPFIA3-211ENST00000602848 C5orf52A6NGY3 159 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 HLA-DQA1P01909 254 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 NDUFA11Q86Y39 141 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 DYNLRB2Q8TF09 96 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 C2CD3Q4AC94 2353 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 SNURFLB1AK76 121 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 CRISP2P16562 243 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 DEFB114Q30KQ6 69 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 LINC01559Q495D7 138 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 MRPL54Q6P161 138 aaKnown RBP16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 TMEM136Q6ZRR5 245 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 PRIMA1Q86XR5 153 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 ODF3Q96PU9 254 aa16.7■□□□□ 0.26
PPFIA3-211ENST00000602848 A0A1B0GW15 77 aa16.69■□□□□ 0.26
PPFIA3-211ENST00000602848 A0A1B0GXF2 115 aa16.69■□□□□ 0.26
PPFIA3-211ENST00000602848 SPINK4O60575 86 aa16.69■□□□□ 0.26
PPFIA3-211ENST00000602848 TFPI2P48307 235 aa16.69■□□□□ 0.26
PPFIA3-211ENST00000602848 APRG1Q8IVJ8 170 aa16.69■□□□□ 0.26
PPFIA3-211ENST00000602848 MRPL18Q9H0U6 180 aaKnown RBP16.69■□□□□ 0.26
PPFIA3-211ENST00000602848 PSMG4Q5JS54 123 aa16.68■□□□□ 0.26
PPFIA3-211ENST00000602848 PGLYRP4Q96LB8 373 aa16.68■□□□□ 0.26
PPFIA3-211ENST00000602848 SELENOKQ9Y6D0 94 aa16.68■□□□□ 0.26
PPFIA3-211ENST00000602848 ADARB2-AS1A8MUL3 147 aa16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 DUSP14O95147 198 aaKnown RBP16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 S100A8P05109 93 aa16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 ZNF688P0C7X2 276 aa16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 ZNF705DP0CH99 300 aaPredicted RBP16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 ZNF705BP0CI00 300 aaPredicted RBP16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 SNRPEP62304 92 aaKnown RBP16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 HBBP68871 147 aa16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 EBLN2Q6P2I7 272 aa16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 A0A0J9YX75 114 aa16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 ZFAND2AQ8N6M9 145 aa16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 BORCS7Q96B45 105 aa16.67■□□□□ 0.26
PPFIA3-211ENST00000602848 A0A1B0GUT8 65 aa16.66■□□□□ 0.26
PPFIA3-211ENST00000602848 F6UB75 175 aa16.66■□□□□ 0.26
PPFIA3-211ENST00000602848 ORM1P02763 201 aa16.66■□□□□ 0.26
PPFIA3-211ENST00000602848 GZMBP10144 247 aa16.66■□□□□ 0.26
PPFIA3-211ENST00000602848 RIGQ13278 110 aa16.66■□□□□ 0.26
PPFIA3-211ENST00000602848 FOXI2Q6ZQN5 318 aa16.66■□□□□ 0.26
PPFIA3-211ENST00000602848 TMEM61Q8N0U2 210 aa16.66■□□□□ 0.26
PPFIA3-211ENST00000602848 SPAG8Q99932 426 aaPredicted RBP16.66■□□□□ 0.26
PPFIA3-211ENST00000602848 TRAV21A0A0B4J279 112 aa16.65■□□□□ 0.26
PPFIA3-211ENST00000602848 NDUFA6P56556 154 aa16.65■□□□□ 0.26
PPFIA3-211ENST00000602848 RAB4BP61018 213 aa16.65■□□□□ 0.26
PPFIA3-211ENST00000602848 OR4C46A6NHA9 309 aa16.64■□□□□ 0.25
PPFIA3-211ENST00000602848 UBE2CO00762 179 aa16.64■□□□□ 0.25
PPFIA3-211ENST00000602848 FRMD6-AS1P0C7T7 363 aa16.64■□□□□ 0.25
PPFIA3-211ENST00000602848 HIST2H2BDQ6DRA6 164 aa16.64■□□□□ 0.25
PPFIA3-211ENST00000602848 GPX1P07203 203 aa16.63■□□□□ 0.25
PPFIA3-211ENST00000602848 HOXA5P20719 270 aa16.63■□□□□ 0.25
PPFIA3-211ENST00000602848 LEPP41159 167 aa16.63■□□□□ 0.25
PPFIA3-211ENST00000602848 COA6Q5JTJ3 125 aaKnown RBP16.63■□□□□ 0.25
PPFIA3-211ENST00000602848 IGLC6P0CF74 106 aa16.63■□□□□ 0.25
PPFIA3-211ENST00000602848 KLLNB2CW77 178 aa16.62■□□□□ 0.25
PPFIA3-211ENST00000602848 F2Z2F3 143 aa16.62■□□□□ 0.25
PPFIA3-211ENST00000602848 APCSP02743 223 aa16.62■□□□□ 0.25
PPFIA3-211ENST00000602848 DEFB1P60022 68 aa16.62■□□□□ 0.25
PPFIA3-211ENST00000602848 CD300EQ496F6 205 aaPredicted RBP16.62■□□□□ 0.25
PPFIA3-211ENST00000602848 FER1L6-AS1Q8NA97 138 aa16.62■□□□□ 0.25
PPFIA3-211ENST00000602848 GATD1Q8NB37 220 aa16.62■□□□□ 0.25
PPFIA3-211ENST00000602848 TSPOP30536 169 aa16.61■□□□□ 0.25
PPFIA3-211ENST00000602848 CTRLP40313 264 aa16.61■□□□□ 0.25
PPFIA3-211ENST00000602848 CAMPP49913 170 aa16.61■□□□□ 0.25
PPFIA3-211ENST00000602848 KRTAP10-3P60369 221 aa16.61■□□□□ 0.25
PPFIA3-211ENST00000602848 NSUN5P1Q3KNT7 163 aa16.61■□□□□ 0.25
PPFIA3-211ENST00000602848 OR2K2Q8NGT1 345 aa16.61■□□□□ 0.25
PPFIA3-211ENST00000602848 TMSB15BA0A087X1C1 80 aa16.6■□□□□ 0.25
PPFIA3-211ENST00000602848 CMC4P56277 68 aaPredicted RBP16.6■□□□□ 0.25
PPFIA3-211ENST00000602848 LYZL1Q6UWQ5 148 aa16.6■□□□□ 0.25
PPFIA3-211ENST00000602848 ZNF575Q86XF7 245 aa16.6■□□□□ 0.25
PPFIA3-211ENST00000602848 IGKV3D-20A0A0C4DH25 116 aa16.59■□□□□ 0.25
PPFIA3-211ENST00000602848 RIPPLY3P57055 190 aa16.59■□□□□ 0.25
PPFIA3-211ENST00000602848 A8MTW9 85 aa16.59■□□□□ 0.25
PPFIA3-211ENST00000602848 PRR9Q5T870 116 aa16.59■□□□□ 0.25
PPFIA3-211ENST00000602848 GDF5OSQ5U4N7 250 aa16.59■□□□□ 0.25
PPFIA3-211ENST00000602848 CNFNQ9BYD5 112 aa16.59■□□□□ 0.25
PPFIA3-211ENST00000602848 C11orf21Q9P2W6 132 aa16.59■□□□□ 0.25
PPFIA3-211ENST00000602848 ATRQ13535 2644 aa16.59■□□□□ 0.25
PPFIA3-211ENST00000602848 ARMS2P0C7Q2 107 aa16.58■□□□□ 0.24
PPFIA3-211ENST00000602848 RNASE4P34096 147 aaKnown RBP16.58■□□□□ 0.24
PPFIA3-211ENST00000602848 DEFB131AP59861 70 aa16.57■□□□□ 0.24
PPFIA3-211ENST00000602848 ZNF256Q9Y2P7 627 aaPredicted RBP16.57■□□□□ 0.24
PPFIA3-211ENST00000602848 CD33P20138 364 aa16.56■□□□□ 0.24
PPFIA3-211ENST00000602848 Q0VG73 95 aa16.56■□□□□ 0.24
PPFIA3-211ENST00000602848 ZNF493Q6ZR52 646 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms