RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 OR2D3Q8NGH3 330 aa13.4□□□□□ -0.26
VRK3-225ENST00000601912 BTF3L4Q96K17 158 aa13.4□□□□□ -0.26
VRK3-225ENST00000601912 FAM19A4Q96LR4 140 aa13.4□□□□□ -0.26
VRK3-225ENST00000601912 ODF3Q96PU9 254 aa13.4□□□□□ -0.26
VRK3-225ENST00000601912 MCRIP2Q9BUT9 160 aaKnown RBP13.4□□□□□ -0.26
VRK3-225ENST00000601912 A0A1W2PPQ1 181 aa13.39□□□□□ -0.27
VRK3-225ENST00000601912 ZNF80P51504 273 aaPredicted RBP13.39□□□□□ -0.27
VRK3-225ENST00000601912 TSKUQ8WUA8 353 aa13.39□□□□□ -0.27
VRK3-225ENST00000601912 TRBV24-1A0A075B6N3 115 aa13.38□□□□□ -0.27
VRK3-225ENST00000601912 TGIF2-C20orf24A0A0A6YYL0 155 aa13.38□□□□□ -0.27
VRK3-225ENST00000601912 SMIM27A0A1W2PRY6 76 aa13.38□□□□□ -0.27
VRK3-225ENST00000601912 CA1P00915 261 aaPredicted RBP13.38□□□□□ -0.27
VRK3-225ENST00000601912 GPX1P07203 203 aa13.38□□□□□ -0.27
VRK3-225ENST00000601912 CRISP2P16562 243 aa13.38□□□□□ -0.27
VRK3-225ENST00000601912 ACTL10Q5JWF8 245 aa13.38□□□□□ -0.27
VRK3-225ENST00000601912 TRAV9-1A0A075B6T8 112 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 XKRY2A2RUG3 117 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 OR11H12B2RN74 326 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 HLA-DRB4P13762 266 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 LEPP41159 167 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 ZFAND2AQ8N6M9 145 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 HLA-DRB4X5D2U9 266 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 TMEM189A5PLL7 270 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 KNCNA6PVL3 124 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 IGKV3-20P01619 116 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 TSPOP30536 169 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 RPL19P84098 196 aaKnown RBP13.37□□□□□ -0.27
VRK3-225ENST00000601912 ODF3L2Q3SX64 289 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 WFDC9Q8NEX5 89 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 FAM210BQ96KR6 192 aa13.37□□□□□ -0.27
VRK3-225ENST00000601912 J3KRW8 73 aa13.36□□□□□ -0.27
VRK3-225ENST00000601912 CXCL1P09341 107 aa13.36□□□□□ -0.27
VRK3-225ENST00000601912 RAB5AP20339 215 aa13.36□□□□□ -0.27
VRK3-225ENST00000601912 TCL1AP56279 114 aa13.36□□□□□ -0.27
VRK3-225ENST00000601912 BEAN1Q3B7T3 259 aa13.36□□□□□ -0.27
VRK3-225ENST00000601912 PYGO2Q9BRQ0 406 aa13.36□□□□□ -0.27
VRK3-225ENST00000601912 GFRA4Q9GZZ7 299 aa13.36□□□□□ -0.27
VRK3-225ENST00000601912 NAT8BQ9UHF3 227 aa13.36□□□□□ -0.27
VRK3-225ENST00000601912 TRAV21A0A0B4J279 112 aa13.35□□□□□ -0.27
VRK3-225ENST00000601912 FAM231BA6NCW3 169 aa13.35□□□□□ -0.27
VRK3-225ENST00000601912 H3BMM0 161 aa13.35□□□□□ -0.27
VRK3-225ENST00000601912 ORM1P02763 201 aa13.35□□□□□ -0.27
VRK3-225ENST00000601912 RPS20P60866 119 aaKnown RBP13.35□□□□□ -0.27
VRK3-225ENST00000601912 APRG1Q8IVJ8 170 aa13.35□□□□□ -0.27
VRK3-225ENST00000601912 FAM110AQ9BQ89 295 aa13.35□□□□□ -0.27
VRK3-225ENST00000601912 FBN1P35555 2871 aaKnown RBP13.34□□□□□ -0.27
VRK3-225ENST00000601912 KLLNB2CW77 178 aa13.34□□□□□ -0.27
VRK3-225ENST00000601912 RNASE4P34096 147 aaKnown RBP13.34□□□□□ -0.27
VRK3-225ENST00000601912 NEU1Q99519 415 aa13.34□□□□□ -0.27
VRK3-225ENST00000601912 HIGD1CA8MV81 97 aa13.34□□□□□ -0.27
VRK3-225ENST00000601912 CDKN1BP46527 198 aa13.34□□□□□ -0.27
VRK3-225ENST00000601912 ZNF124Q15973 351 aa13.34□□□□□ -0.27
VRK3-225ENST00000601912 PRR9Q5T870 116 aa13.34□□□□□ -0.27
VRK3-225ENST00000601912 LINC01559Q495D7 138 aa13.33□□□□□ -0.28
VRK3-225ENST00000601912 Q6AWC8 147 aa13.33□□□□□ -0.28
VRK3-225ENST00000601912 SPATA3Q8NHX4 192 aa13.33□□□□□ -0.28
VRK3-225ENST00000601912 TMSB15BA0A087X1C1 80 aa13.32□□□□□ -0.28
VRK3-225ENST00000601912 A8MTW9 85 aa13.32□□□□□ -0.28
VRK3-225ENST00000601912 RPS10P46783 165 aaKnown RBP13.32□□□□□ -0.28
VRK3-225ENST00000601912 AMTNQ6UX39 209 aa13.32□□□□□ -0.28
VRK3-225ENST00000601912 STHQ8IWL8 128 aa13.32□□□□□ -0.28
VRK3-225ENST00000601912 NUP35Q8NFH5 326 aa13.32□□□□□ -0.28
VRK3-225ENST00000601912 CD7P09564 240 aa13.31□□□□□ -0.28
VRK3-225ENST00000601912 GZMBP10144 247 aa13.31□□□□□ -0.28
VRK3-225ENST00000601912 SPINK13Q1W4C9 94 aa13.31□□□□□ -0.28
VRK3-225ENST00000601912 GTSF1Q8WW33 167 aa13.31□□□□□ -0.28
VRK3-225ENST00000601912 CLUHP3Q96NS8 147 aa13.31□□□□□ -0.28
VRK3-225ENST00000601912 AGRNO00468 2067 aa13.31□□□□□ -0.28
VRK3-225ENST00000601912 C7orf71A4D174 169 aa13.31□□□□□ -0.28
VRK3-225ENST00000601912 M0R2Z0 102 aa13.31□□□□□ -0.28
VRK3-225ENST00000601912 TYMSP04818 313 aa13.31□□□□□ -0.28
VRK3-225ENST00000601912 FOXA3P55318 350 aaPredicted RBP13.31□□□□□ -0.28
VRK3-225ENST00000601912 KIR3DS1Q14943 382 aa13.31□□□□□ -0.28
VRK3-225ENST00000601912 GTSCR1Q86UQ5 136 aa13.3□□□□□ -0.28
VRK3-225ENST00000601912 PGLYRP4Q96LB8 373 aa13.3□□□□□ -0.28
VRK3-225ENST00000601912 SRD5A3Q9H8P0 318 aa13.3□□□□□ -0.28
VRK3-225ENST00000601912 IGKV3D-20A0A0C4DH25 116 aa13.29□□□□□ -0.28
VRK3-225ENST00000601912 SPINK4O60575 86 aa13.29□□□□□ -0.28
VRK3-225ENST00000601912 IGLL1P15814 213 aa13.29□□□□□ -0.28
VRK3-225ENST00000601912 C11orf21Q9P2W6 132 aa13.29□□□□□ -0.28
VRK3-225ENST00000601912 NAGKQ9UJ70 344 aa13.29□□□□□ -0.28
VRK3-225ENST00000601912 TRAV12-2A0A075B6T6 113 aa13.28□□□□□ -0.28
VRK3-225ENST00000601912 TRAV12-3A0A0B4J271 114 aa13.28□□□□□ -0.28
VRK3-225ENST00000601912 GFI1BQ5VTD9 330 aa13.28□□□□□ -0.28
VRK3-225ENST00000601912 NOTCH3Q9UM47 2321 aa13.28□□□□□ -0.28
VRK3-225ENST00000601912 NUTF2P61970 127 aaKnown RBP13.28□□□□□ -0.28
VRK3-225ENST00000601912 COX19Q49B96 90 aa13.28□□□□□ -0.28
VRK3-225ENST00000601912 MRPL54Q6P161 138 aaKnown RBP13.28□□□□□ -0.28
VRK3-225ENST00000601912 Q6ZQT7 251 aa13.28□□□□□ -0.28
VRK3-225ENST00000601912 ATP5L2Q7Z4Y8 100 aa13.28□□□□□ -0.28
VRK3-225ENST00000601912 BORCS7Q96B45 105 aa13.28□□□□□ -0.28
VRK3-225ENST00000601912 TPPP3Q9BW30 176 aa13.28□□□□□ -0.28
VRK3-225ENST00000601912 C19orf73Q9NVV2 129 aa13.28□□□□□ -0.28
VRK3-225ENST00000601912 TMA7Q9Y2S6 64 aaKnown RBP13.28□□□□□ -0.28
VRK3-225ENST00000601912 RBMY1BA6NDE4 496 aaKnown RBP13.27□□□□□ -0.29
VRK3-225ENST00000601912 RBMY1EA6NEQ0 496 aaKnown RBP13.27□□□□□ -0.29
VRK3-225ENST00000601912 WIPF1O43516 503 aa13.27□□□□□ -0.29
VRK3-225ENST00000601912 RBMY1DP0C7P1 496 aaKnown RBP13.27□□□□□ -0.29
VRK3-225ENST00000601912 FXYD7P58549 80 aa13.27□□□□□ -0.29
VRK3-225ENST00000601912 RASL11AQ6T310 242 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms