RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 ITPR1Q14643 2758 aa15.52■□□□□ 0.07
SHKBP1-225ENST00000600733 TRBV7-1A0A0A6YYK4 115 aa15.51■□□□□ 0.07
SHKBP1-225ENST00000600733 TMEM78Q5T7P6 136 aa15.51■□□□□ 0.07
SHKBP1-225ENST00000600733 ABCA2Q9BZC7 2435 aa15.51■□□□□ 0.07
SHKBP1-225ENST00000600733 K7EP13 123 aa15.5■□□□□ 0.07
SHKBP1-225ENST00000600733 UQCRFS1P47985 274 aa15.5■□□□□ 0.07
SHKBP1-225ENST00000600733 SPTAN1Q13813 2472 aaKnown RBP15.5■□□□□ 0.07
SHKBP1-225ENST00000600733 TRAV8-6A0A0B4J262 113 aa15.5■□□□□ 0.07
SHKBP1-225ENST00000600733 C7orf71A4D174 169 aa15.5■□□□□ 0.07
SHKBP1-225ENST00000600733 NMUP48645 174 aa15.5■□□□□ 0.07
SHKBP1-225ENST00000600733 PCP2Q8IVA1 136 aa15.5■□□□□ 0.07
SHKBP1-225ENST00000600733 SMAD7O15105 426 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-225ENST00000600733 ATP5G2Q06055 141 aa15.49■□□□□ 0.07
SHKBP1-225ENST00000600733 LINC01546A6NGU7 62 aa15.48■□□□□ 0.07
SHKBP1-225ENST00000600733 NXT2Q9NPJ8 142 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-225ENST00000600733 U3KQE9 123 aa15.48■□□□□ 0.07
SHKBP1-225ENST00000600733 IGHV7-4-1A0A0J9YVY3 117 aa15.48■□□□□ 0.07
SHKBP1-225ENST00000600733 C19orf84I3L1E1 186 aa15.48■□□□□ 0.07
SHKBP1-225ENST00000600733 FCER1GP30273 86 aa15.48■□□□□ 0.07
SHKBP1-225ENST00000600733 NPFFR1Q9GZQ6 430 aa15.48■□□□□ 0.07
SHKBP1-225ENST00000600733 MAP1AP78559 2803 aaPredicted RBP15.48■□□□□ 0.07
SHKBP1-225ENST00000600733 COL12A1Q99715 3063 aa15.47■□□□□ 0.07
SHKBP1-225ENST00000600733 RBX1P62877 108 aa15.47■□□□□ 0.07
SHKBP1-225ENST00000600733 TRAV26-2A0A0B4J265 109 aa15.47■□□□□ 0.07
SHKBP1-225ENST00000600733 TRAV41A0A0B4J266 112 aa15.47■□□□□ 0.07
SHKBP1-225ENST00000600733 SEC11AP67812 179 aa15.47■□□□□ 0.07
SHKBP1-225ENST00000600733 A1L4Q6 167 aa15.46■□□□□ 0.07
SHKBP1-225ENST00000600733 BRD3OSQ6XYD6 125 aa15.46■□□□□ 0.07
SHKBP1-225ENST00000600733 C9orf47Q6ZRZ4 202 aa15.46■□□□□ 0.07
SHKBP1-225ENST00000600733 UFC1Q9Y3C8 167 aa15.46■□□□□ 0.07
SHKBP1-225ENST00000600733 ODF1Q14990 250 aa15.46■□□□□ 0.06
SHKBP1-225ENST00000600733 TMEM158Q8WZ71 300 aa15.46■□□□□ 0.06
SHKBP1-225ENST00000600733 MRPL53Q96EL3 112 aaKnown RBP15.46■□□□□ 0.06
SHKBP1-225ENST00000600733 C16orf92Q96LL3 132 aa15.46■□□□□ 0.06
SHKBP1-225ENST00000600733 PRR9Q5T870 116 aa15.45■□□□□ 0.06
SHKBP1-225ENST00000600733 OR2K2Q8NGT1 345 aa15.45■□□□□ 0.06
SHKBP1-225ENST00000600733 PEF1Q9UBV8 284 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-225ENST00000600733 MOB4Q9Y3A3 225 aa15.45■□□□□ 0.06
SHKBP1-225ENST00000600733 IGLV2-18A0A075B6J9 118 aa15.45■□□□□ 0.06
SHKBP1-225ENST00000600733 TRBV12-3P01733 135 aa15.45■□□□□ 0.06
SHKBP1-225ENST00000600733 IGF1P05019 195 aa15.45■□□□□ 0.06
SHKBP1-225ENST00000600733 PRSS1P07477 247 aa15.45■□□□□ 0.06
SHKBP1-225ENST00000600733 ADAMTSL5Q6ZMM2 481 aa15.45■□□□□ 0.06
SHKBP1-225ENST00000600733 ITLN2Q8WWU7 325 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-225ENST00000600733 C20orf173Q96LM9 149 aa15.45■□□□□ 0.06
SHKBP1-225ENST00000600733 J3KRW8 73 aa15.44■□□□□ 0.06
SHKBP1-225ENST00000600733 UNQ9165/PRO28630Q6UXU0 137 aa15.44■□□□□ 0.06
SHKBP1-225ENST00000600733 OR9G4Q8NGQ1 327 aa15.44■□□□□ 0.06
SHKBP1-225ENST00000600733 PIFOQ8TCI5 191 aa15.44■□□□□ 0.06
SHKBP1-225ENST00000600733 C19orf54Q5BKX5 351 aa15.43■□□□□ 0.06
SHKBP1-225ENST00000600733 Q8N8P6 123 aa15.43■□□□□ 0.06
SHKBP1-225ENST00000600733 GLMPQ8WWB7 406 aa15.43■□□□□ 0.06
SHKBP1-225ENST00000600733 COL25A1Q9BXS0 654 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-225ENST00000600733 IGKV2D-26A0A0A0MRZ7 120 aa15.43■□□□□ 0.06
SHKBP1-225ENST00000600733 IGHV4-39P01824 125 aa15.43■□□□□ 0.06
SHKBP1-225ENST00000600733 NRACQ8N912 160 aa15.43■□□□□ 0.06
SHKBP1-225ENST00000600733 HIF1ANQ9NWT6 349 aa15.43■□□□□ 0.06
SHKBP1-225ENST00000600733 HHLA3Q9XRX5 114 aa15.43■□□□□ 0.06
SHKBP1-225ENST00000600733 H3BVH4 76 aa15.42■□□□□ 0.06
SHKBP1-225ENST00000600733 ARL3P36405 182 aa15.42■□□□□ 0.06
SHKBP1-225ENST00000600733 HSD52Q0P140 79 aa15.42■□□□□ 0.06
SHKBP1-225ENST00000600733 SPANXN1Q5VSR9 72 aa15.42■□□□□ 0.06
SHKBP1-225ENST00000600733 TTTY13Q9BZ97 58 aa15.42■□□□□ 0.06
SHKBP1-225ENST00000600733 SMIM15Q7Z3B0 74 aa15.42■□□□□ 0.06
SHKBP1-225ENST00000600733 FOXC2Q99958 501 aa15.42■□□□□ 0.06
SHKBP1-225ENST00000600733 ZMAT4Q9H898 229 aa15.42■□□□□ 0.06
SHKBP1-225ENST00000600733 TRAV40A0A0B4J280 105 aa15.41■□□□□ 0.06
SHKBP1-225ENST00000600733 FAM223BA6NKX1 122 aa15.41■□□□□ 0.06
SHKBP1-225ENST00000600733 SIVA1O15304 175 aa15.41■□□□□ 0.06
SHKBP1-225ENST00000600733 DEFB1P60022 68 aa15.41■□□□□ 0.06
SHKBP1-225ENST00000600733 FAM223AQ8IWN6 122 aa15.41■□□□□ 0.06
SHKBP1-225ENST00000600733 C21orf62-AS1Q17RA5 79 aa15.41■□□□□ 0.06
SHKBP1-225ENST00000600733 NAA38Q9BRA0 125 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-225ENST00000600733 IGHV1-69DA0A0B4J2H0 117 aa15.4■□□□□ 0.06
SHKBP1-225ENST00000600733 A6NDN8 102 aa15.4■□□□□ 0.06
SHKBP1-225ENST00000600733 SPRY2O43597 315 aa15.4■□□□□ 0.06
SHKBP1-225ENST00000600733 IGHV1-69P01742 117 aa15.4■□□□□ 0.06
SHKBP1-225ENST00000600733 SMIM17P0DL12 118 aa15.4■□□□□ 0.06
SHKBP1-225ENST00000600733 GPHB5Q86YW7 130 aa15.4■□□□□ 0.06
SHKBP1-225ENST00000600733 KIR3DS1Q14943 382 aa15.4■□□□□ 0.06
SHKBP1-225ENST00000600733 OR4X2Q8NGF9 303 aa15.4■□□□□ 0.06
SHKBP1-225ENST00000600733 CST9LQ9H4G1 147 aa15.4■□□□□ 0.06
SHKBP1-225ENST00000600733 IGKCP01834 107 aa15.39■□□□□ 0.05
SHKBP1-225ENST00000600733 TM4SF20Q53R12 229 aa15.39■□□□□ 0.05
SHKBP1-225ENST00000600733 C9orf139Q6ZV77 190 aa15.39■□□□□ 0.05
SHKBP1-225ENST00000600733 JMJD8Q96S16 334 aa15.39■□□□□ 0.05
SHKBP1-225ENST00000600733 LY6EQ16553 131 aa15.38■□□□□ 0.05
SHKBP1-225ENST00000600733 SELENOKQ9Y6D0 94 aa15.38■□□□□ 0.05
SHKBP1-225ENST00000600733 IGHV4-4A0A075B6R2 117 aa15.38■□□□□ 0.05
SHKBP1-225ENST00000600733 H3BRM9 83 aa15.38■□□□□ 0.05
SHKBP1-225ENST00000600733 GNLYP22749 145 aa15.38■□□□□ 0.05
SHKBP1-225ENST00000600733 PCP4P48539 62 aa15.38■□□□□ 0.05
SHKBP1-225ENST00000600733 RNF151Q2KHN1 245 aa15.38■□□□□ 0.05
SHKBP1-225ENST00000600733 CELSR2Q9HCU4 2923 aa15.38■□□□□ 0.05
SHKBP1-225ENST00000600733 IGHV4-61A0A0C4DH41 118 aa15.37■□□□□ 0.05
SHKBP1-225ENST00000600733 GAGE12BA1L429 117 aa15.37■□□□□ 0.05
SHKBP1-225ENST00000600733 TMEM8BA6NDV4 472 aa15.37■□□□□ 0.05
SHKBP1-225ENST00000600733 C9orf118A6NHY6 69 aa15.37■□□□□ 0.05
SHKBP1-225ENST00000600733 H3BUT2 72 aa15.37■□□□□ 0.05
SHKBP1-225ENST00000600733 IGHV3-11P01762 117 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms