RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 FMC1Q96HJ9 113 aa14.51□□□□□ -0.09
SHKBP1-222ENST00000600320 EIF5A2Q9GZV4 153 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-222ENST00000600320 ZMAT4Q9H898 229 aa14.51□□□□□ -0.09
SHKBP1-222ENST00000600320 IGHV3OR16-12A0A075B7B8 117 aa14.5□□□□□ -0.09
SHKBP1-222ENST00000600320 RGS13O14921 159 aa14.5□□□□□ -0.09
SHKBP1-222ENST00000600320 GPX1P07203 203 aa14.5□□□□□ -0.09
SHKBP1-222ENST00000600320 UBE2G1P62253 170 aa14.5□□□□□ -0.09
SHKBP1-222ENST00000600320 SRSF3P84103 164 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-222ENST00000600320 OR11H2Q8NH07 326 aa14.5□□□□□ -0.09
SHKBP1-222ENST00000600320 NDFIP1Q9BT67 221 aa14.5□□□□□ -0.09
SHKBP1-222ENST00000600320 MED9Q9NWA0 146 aa14.5□□□□□ -0.09
SHKBP1-222ENST00000600320 GOLT1BQ9Y3E0 138 aa14.5□□□□□ -0.09
SHKBP1-222ENST00000600320 X6R8D5 127 aa14.5□□□□□ -0.09
SHKBP1-222ENST00000600320 PRM2P04554 102 aa14.49□□□□□ -0.09
SHKBP1-222ENST00000600320 RAB19A4D1S5 217 aa14.48□□□□□ -0.09
SHKBP1-222ENST00000600320 C9JQL5 133 aa14.48□□□□□ -0.09
SHKBP1-222ENST00000600320 ZNF324O75467 553 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-222ENST00000600320 SRP19P09132 144 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-222ENST00000600320 RPL35P42766 123 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-222ENST00000600320 ZNF80P51504 273 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-222ENST00000600320 SAPCD1Q5SSQ6 148 aa14.48□□□□□ -0.09
SHKBP1-222ENST00000600320 LTAP01374 205 aa14.47□□□□□ -0.09
SHKBP1-222ENST00000600320 S100A9P06702 114 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-222ENST00000600320 LINC01587Q99440 93 aa14.47□□□□□ -0.09
SHKBP1-222ENST00000600320 C20orf144Q9BQM9 153 aa14.47□□□□□ -0.09
SHKBP1-222ENST00000600320 TAS2R60P59551 318 aa14.46□□□□□ -0.09
SHKBP1-222ENST00000600320 Q6AWC8 147 aa14.46□□□□□ -0.09
SHKBP1-222ENST00000600320 NHLRC2Q8NBF2 726 aa14.46□□□□□ -0.09
SHKBP1-222ENST00000600320 TMEM208Q9BTX3 173 aa14.46□□□□□ -0.09
SHKBP1-222ENST00000600320 ZFP30Q9Y2G7 519 aa14.46□□□□□ -0.09
SHKBP1-222ENST00000600320 ZNF705GA8MUZ8 300 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-222ENST00000600320 TMEM250H0YL14 139 aa14.45□□□□□ -0.1
SHKBP1-222ENST00000600320 NDUFS6O75380 124 aaKnown RBP14.45□□□□□ -0.1
SHKBP1-222ENST00000600320 GCGP01275 180 aa14.45□□□□□ -0.1
SHKBP1-222ENST00000600320 SMUG1Q53HV7 270 aa14.45□□□□□ -0.1
SHKBP1-222ENST00000600320 CENPWQ5EE01 88 aa14.45□□□□□ -0.1
SHKBP1-222ENST00000600320 BAGE2Q86Y30 109 aa14.45□□□□□ -0.1
SHKBP1-222ENST00000600320 ZC2HC1AQ96GY0 325 aa14.45□□□□□ -0.1
SHKBP1-222ENST00000600320 NIPSNAP3BQ9BS92 247 aa14.45□□□□□ -0.1
SHKBP1-222ENST00000600320 PARLQ9H300 379 aa14.45□□□□□ -0.1
SHKBP1-222ENST00000600320 TRBV20OR9-2A0A075B6H5 130 aa14.44□□□□□ -0.1
SHKBP1-222ENST00000600320 H7BYZ3 331 aa14.44□□□□□ -0.1
SHKBP1-222ENST00000600320 PEA15Q15121 130 aa14.44□□□□□ -0.1
SHKBP1-222ENST00000600320 COX8CQ7Z4L0 72 aa14.44□□□□□ -0.1
SHKBP1-222ENST00000600320 TMEM183AQ8IXX5 376 aa14.44□□□□□ -0.1
SHKBP1-222ENST00000600320 TMEM256Q8N2U0 113 aa14.44□□□□□ -0.1
SHKBP1-222ENST00000600320 Q8NAQ8 132 aa14.44□□□□□ -0.1
SHKBP1-222ENST00000600320 NEU1Q99519 415 aa14.44□□□□□ -0.1
SHKBP1-222ENST00000600320 U3KQK5 164 aa14.44□□□□□ -0.1
SHKBP1-222ENST00000600320 IGHV4-28A0A0C4DH34 117 aa14.43□□□□□ -0.1
SHKBP1-222ENST00000600320 IGLV2-8P01709 118 aa14.43□□□□□ -0.1
SHKBP1-222ENST00000600320 AZU1P20160 251 aa14.43□□□□□ -0.1
SHKBP1-222ENST00000600320 CRIP1P50238 77 aa14.43□□□□□ -0.1
SHKBP1-222ENST00000600320 CEBPGP53567 150 aa14.43□□□□□ -0.1
SHKBP1-222ENST00000600320 ZNF674Q2M3X9 581 aa14.43□□□□□ -0.1
SHKBP1-222ENST00000600320 MLST8Q9BVC4 326 aa14.43□□□□□ -0.1
SHKBP1-222ENST00000600320 PGPEP1LA6NFU8 196 aa14.42□□□□□ -0.1
SHKBP1-222ENST00000600320 DEFB4AO15263 64 aa14.42□□□□□ -0.1
SHKBP1-222ENST00000600320 MUC21Q5SSG8 566 aa14.42□□□□□ -0.1
SHKBP1-222ENST00000600320 TRAV21A0A0B4J279 112 aa14.41□□□□□ -0.1
SHKBP1-222ENST00000600320 SMIM9A6NGZ8 99 aa14.41□□□□□ -0.1
SHKBP1-222ENST00000600320 MIFP14174 115 aa14.41□□□□□ -0.1
SHKBP1-222ENST00000600320 HTN1P15515 57 aa14.41□□□□□ -0.1
SHKBP1-222ENST00000600320 RRN3P1Q2M238 152 aa14.41□□□□□ -0.1
SHKBP1-222ENST00000600320 PYGO2Q9BRQ0 406 aa14.41□□□□□ -0.1
SHKBP1-222ENST00000600320 C11orf21Q9P2W6 132 aa14.41□□□□□ -0.1
SHKBP1-222ENST00000600320 IGHV1OR15-1A0A075B7D0 117 aa14.4□□□□□ -0.1
SHKBP1-222ENST00000600320 PFN1P07737 140 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-222ENST00000600320 GNG4P50150 75 aa14.4□□□□□ -0.1
SHKBP1-222ENST00000600320 LINC00467Q9BRT7 94 aa14.4□□□□□ -0.1
SHKBP1-222ENST00000600320 NAGKQ9UJ70 344 aa14.4□□□□□ -0.1
SHKBP1-222ENST00000600320 TP53TG3Q9ULZ0 132 aa14.4□□□□□ -0.1
SHKBP1-222ENST00000600320 TENM3Q9P273 2699 aa14.4□□□□□ -0.1
SHKBP1-222ENST00000600320 A0A0J9YWU9 116 aa14.39□□□□□ -0.11
SHKBP1-222ENST00000600320 SH2D1AO60880 128 aa14.39□□□□□ -0.11
SHKBP1-222ENST00000600320 ANXA2RQ3ZCQ2 193 aa14.39□□□□□ -0.11
SHKBP1-222ENST00000600320 SMDT1Q9H4I9 107 aa14.39□□□□□ -0.11
SHKBP1-222ENST00000600320 C9JCJ5 164 aa14.38□□□□□ -0.11
SHKBP1-222ENST00000600320 EIF4E3Q8N5X7 224 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-222ENST00000600320 NBEAL2Q6ZNJ1 2754 aa14.38□□□□□ -0.11
SHKBP1-222ENST00000600320 PLAC8L1A1L4L8 177 aa14.37□□□□□ -0.11
SHKBP1-222ENST00000600320 LINC00862A6NCI5 91 aa14.37□□□□□ -0.11
SHKBP1-222ENST00000600320 CBY3A6NI87 242 aa14.37□□□□□ -0.11
SHKBP1-222ENST00000600320 FABP5P3A8MUU1 101 aa14.37□□□□□ -0.11
SHKBP1-222ENST00000600320 RNASE8Q8TDE3 154 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-222ENST00000600320 SMIM7Q9BQ49 75 aa14.37□□□□□ -0.11
SHKBP1-222ENST00000600320 EDA2RQ9HAV5 297 aa14.37□□□□□ -0.11
SHKBP1-222ENST00000600320 IGKV3D-20A0A0C4DH25 116 aa14.36□□□□□ -0.11
SHKBP1-222ENST00000600320 ZNF727A8MUV8 499 aa14.36□□□□□ -0.11
SHKBP1-222ENST00000600320 MGST1P10620 155 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-222ENST00000600320 EMP1P54849 157 aa14.36□□□□□ -0.11
SHKBP1-222ENST00000600320 FAM162BQ5T6X4 162 aa14.36□□□□□ -0.11
SHKBP1-222ENST00000600320 PRR27Q6MZM9 219 aa14.36□□□□□ -0.11
SHKBP1-222ENST00000600320 COMMD7Q86VX2 200 aa14.36□□□□□ -0.11
SHKBP1-222ENST00000600320 OCC1Q8TAD7 63 aa14.36□□□□□ -0.11
SHKBP1-222ENST00000600320 SMIM12Q96EX1 92 aa14.36□□□□□ -0.11
SHKBP1-222ENST00000600320 C11orf68Q9H3H3 251 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-222ENST00000600320 GNRH2O43555 120 aa14.35□□□□□ -0.11
SHKBP1-222ENST00000600320 OR5I1Q13606 314 aa14.35□□□□□ -0.11
SHKBP1-222ENST00000600320 TDRG1Q3Y452 100 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms