RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 HIST1H2BAQ96A08 127 aa9.25□□□□□ -0.93
SH2D3A-208ENST00000599563 C8orf49Q96NF6 230 aa9.25□□□□□ -0.93
SH2D3A-208ENST00000599563 NEU1Q99519 415 aa9.25□□□□□ -0.93
SH2D3A-208ENST00000599563 EIF5A2Q9GZV4 153 aaKnown RBP9.25□□□□□ -0.93
SH2D3A-208ENST00000599563 ZNF492Q9P255 531 aa9.25□□□□□ -0.93
SH2D3A-208ENST00000599563 PSG8Q9UQ74 426 aa9.25□□□□□ -0.93
SH2D3A-208ENST00000599563 X6R8D5 127 aa9.25□□□□□ -0.93
SH2D3A-208ENST00000599563 ALMS1Q8TCU4 4167 aa9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 TMEM189A5PLL7 270 aa9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 F6UZH7 168 aa9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 DEFB4AO15263 64 aa9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 CRXO43186 299 aaPredicted RBP9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 SRP19P09132 144 aaKnown RBP9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 RBMY1A1P0DJD3 496 aaKnown RBP9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 RBMY1CP0DJD4 496 aa9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 ZNF138P52744 262 aa9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 FLI1Q01543 452 aaPredicted RBP9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 RBMY1FQ15415 496 aaKnown RBP9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 TMEM78Q5T7P6 136 aa9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 Q6ZQT7 251 aa9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 LINC00477Q96M19 166 aa9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 TXNDC17Q9BRA2 123 aa9.24□□□□□ -0.93
SH2D3A-208ENST00000599563 SERTM2A0A1B0GWG4 89 aa9.23□□□□□ -0.93
SH2D3A-208ENST00000599563 RAB19A4D1S5 217 aa9.23□□□□□ -0.93
SH2D3A-208ENST00000599563 AMBPP02760 352 aa9.23□□□□□ -0.93
SH2D3A-208ENST00000599563 TAGLN2P37802 199 aaKnown RBP9.23□□□□□ -0.93
SH2D3A-208ENST00000599563 BTN1A1Q13410 526 aa9.23□□□□□ -0.93
SH2D3A-208ENST00000599563 LGALS9CQ6DKI2 356 aa9.23□□□□□ -0.93
SH2D3A-208ENST00000599563 ZNF705AQ6ZN79 300 aaPredicted RBP9.23□□□□□ -0.93
SH2D3A-208ENST00000599563 ZFAND2AQ8N6M9 145 aa9.23□□□□□ -0.93
SH2D3A-208ENST00000599563 TCEAL7Q9BRU2 100 aa9.23□□□□□ -0.93
SH2D3A-208ENST00000599563 MED9Q9NWA0 146 aa9.23□□□□□ -0.93
SH2D3A-208ENST00000599563 GOLT1BQ9Y3E0 138 aa9.23□□□□□ -0.93
SH2D3A-208ENST00000599563 TRAV10A0A0B4J240 114 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 TEX48A0A1B0GUV7 120 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 PGPEP1LA6NFU8 196 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 PDE6DO43924 150 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 RPL35P42766 123 aaKnown RBP9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 CEBPGP53567 150 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 UBE2G1P62253 170 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 TMEM183BQ1AE95 376 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 COMMD7Q86VX2 200 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 NHLRC2Q8NBF2 726 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 IGF2BP2-AS1Q96M15 143 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 ODF3Q96PU9 254 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 PARLQ9H300 379 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 PPP1R14DQ9NXH3 145 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 KLF12Q9Y4X4 402 aa9.22□□□□□ -0.93
SH2D3A-208ENST00000599563 TRBV20OR9-2A0A075B6H5 130 aa9.21□□□□□ -0.94
SH2D3A-208ENST00000599563 LINC00862A6NCI5 91 aa9.21□□□□□ -0.94
SH2D3A-208ENST00000599563 KLLNB2CW77 178 aa9.21□□□□□ -0.94
SH2D3A-208ENST00000599563 K7EQM0 130 aa9.21□□□□□ -0.94
SH2D3A-208ENST00000599563 CRISP2P16562 243 aa9.21□□□□□ -0.94
SH2D3A-208ENST00000599563 CDKN1BP46527 198 aa9.21□□□□□ -0.94
SH2D3A-208ENST00000599563 ZNF80P51504 273 aaPredicted RBP9.21□□□□□ -0.94
SH2D3A-208ENST00000599563 PLECQ15149 4684 aaKnown RBP9.21□□□□□ -0.94
SH2D3A-208ENST00000599563 FMC1Q96HJ9 113 aa9.21□□□□□ -0.94
SH2D3A-208ENST00000599563 TRBV6-1A0A0K0K1D8 114 aa9.2□□□□□ -0.94
SH2D3A-208ENST00000599563 TMEM250H0YL14 139 aa9.2□□□□□ -0.94
SH2D3A-208ENST00000599563 IGLV2-8P01709 118 aa9.2□□□□□ -0.94
SH2D3A-208ENST00000599563 LEPP41159 167 aa9.2□□□□□ -0.94
SH2D3A-208ENST00000599563 ZNF674Q2M3X9 581 aa9.2□□□□□ -0.94
SH2D3A-208ENST00000599563 CENPWQ5EE01 88 aa9.2□□□□□ -0.94
SH2D3A-208ENST00000599563 C1orf158Q8N1D5 194 aa9.2□□□□□ -0.94
SH2D3A-208ENST00000599563 TREM1Q9NP99 234 aa9.2□□□□□ -0.94
SH2D3A-208ENST00000599563 TRAV12-3A0A0B4J271 114 aa9.19□□□□□ -0.94
SH2D3A-208ENST00000599563 C7orf71A4D174 169 aa9.19□□□□□ -0.94
SH2D3A-208ENST00000599563 LTAP01374 205 aa9.19□□□□□ -0.94
SH2D3A-208ENST00000599563 PRM2P04554 102 aa9.19□□□□□ -0.94
SH2D3A-208ENST00000599563 SPART-AS1P0CW21 52 aa9.19□□□□□ -0.94
SH2D3A-208ENST00000599563 PEA15Q15121 130 aa9.19□□□□□ -0.94
SH2D3A-208ENST00000599563 ZC2HC1AQ96GY0 325 aa9.19□□□□□ -0.94
SH2D3A-208ENST00000599563 IGHV3OR16-12A0A075B7B8 117 aa9.18□□□□□ -0.94
SH2D3A-208ENST00000599563 IGLL5B9A064 214 aa9.18□□□□□ -0.94
SH2D3A-208ENST00000599563 NDUFS6O75380 124 aaKnown RBP9.18□□□□□ -0.94
SH2D3A-208ENST00000599563 INSP01308 110 aa9.18□□□□□ -0.94
SH2D3A-208ENST00000599563 GPX1P07203 203 aa9.18□□□□□ -0.94
SH2D3A-208ENST00000599563 RNASE4P34096 147 aaKnown RBP9.18□□□□□ -0.94
SH2D3A-208ENST00000599563 TAS2R60P59551 318 aa9.18□□□□□ -0.94
SH2D3A-208ENST00000599563 Q6ZTC4 211 aa9.18□□□□□ -0.94
SH2D3A-208ENST00000599563 NDFIP1Q9BT67 221 aa9.18□□□□□ -0.94
SH2D3A-208ENST00000599563 TMEM208Q9BTX3 173 aa9.18□□□□□ -0.94
SH2D3A-208ENST00000599563 LENEPQ9Y5L5 61 aa9.18□□□□□ -0.94
SH2D3A-208ENST00000599563 TRBV7-9A0A0J9YWB2 115 aa9.17□□□□□ -0.94
SH2D3A-208ENST00000599563 FBLL1A6NHQ2 334 aaKnown RBP9.17□□□□□ -0.94
SH2D3A-208ENST00000599563 GCGP01275 180 aa9.17□□□□□ -0.94
SH2D3A-208ENST00000599563 TSPOP30536 169 aa9.17□□□□□ -0.94
SH2D3A-208ENST00000599563 CRIP1P50238 77 aa9.17□□□□□ -0.94
SH2D3A-208ENST00000599563 RRN3P1Q2M238 152 aa9.17□□□□□ -0.94
SH2D3A-208ENST00000599563 BAGE2Q86Y30 109 aa9.17□□□□□ -0.94
SH2D3A-208ENST00000599563 MLST8Q9BVC4 326 aa9.17□□□□□ -0.94
SH2D3A-208ENST00000599563 DEFB131BA0A096LNP1 70 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 C9JCJ5 164 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 ZNF324O75467 553 aaPredicted RBP9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 S100A9P06702 114 aaKnown RBP9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 SFTA3P0C7M3 94 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 ADCYAP1P18509 176 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 GNG4P50150 75 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 C12orf74Q32Q52 190 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms