RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 SEC11BP0C7V7 166 aa11.72□□□□□ -0.53
PNKP-210ENST00000597965 PRB4P10163 310 aaPredicted RBP11.72□□□□□ -0.53
PNKP-210ENST00000597965 SLAQ13239 276 aa11.72□□□□□ -0.53
PNKP-210ENST00000597965 ZNF266Q14584 549 aa11.72□□□□□ -0.53
PNKP-210ENST00000597965 NFE4Q86UQ8 179 aa11.72□□□□□ -0.53
PNKP-210ENST00000597965 ATP5SQ99766 215 aa11.72□□□□□ -0.53
PNKP-210ENST00000597965 PRELID1Q9Y255 219 aa11.72□□□□□ -0.53
PNKP-210ENST00000597965 TRAV9-2A0A087WT02 112 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 A0A096LPF7 62 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 C7orf71A4D174 169 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 EPM2AB3EWF7 344 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 H3BTX0 84 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 SULT1A2P50226 295 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 LINC00315P59091 139 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 ERVFC1-1P60608 527 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 PDE6HQ13956 83 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 ANXA2RQ3ZCQ2 193 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 EIF4E3Q8N5X7 224 aaKnown RBP11.71□□□□□ -0.53
PNKP-210ENST00000597965 LINC00477Q96M19 166 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 GSN-AS1Q9NRJ2 163 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 UQCC1Q9NVA1 299 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 FUT9Q9Y231 359 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.53
PNKP-210ENST00000597965 TRGV1A0A0A0MS02 117 aa11.7□□□□□ -0.54
PNKP-210ENST00000597965 S100A1P23297 94 aa11.7□□□□□ -0.54
PNKP-210ENST00000597965 HBG1P69891 147 aa11.7□□□□□ -0.54
PNKP-210ENST00000597965 HBG2P69892 147 aa11.7□□□□□ -0.54
PNKP-210ENST00000597965 ATP6V1FQ16864 119 aa11.7□□□□□ -0.54
PNKP-210ENST00000597965 IBA57Q5T440 356 aaKnown RBP11.7□□□□□ -0.54
PNKP-210ENST00000597965 MORN5Q5VZ52 161 aa11.7□□□□□ -0.54
PNKP-210ENST00000597965 COMMD7Q86VX2 200 aa11.7□□□□□ -0.54
PNKP-210ENST00000597965 VSIG2Q96IQ7 327 aa11.7□□□□□ -0.54
PNKP-210ENST00000597965 AAMDCQ9H7C9 122 aa11.7□□□□□ -0.54
PNKP-210ENST00000597965 KLLNB2CW77 178 aa11.69□□□□□ -0.54
PNKP-210ENST00000597965 K7EP13 123 aa11.69□□□□□ -0.54
PNKP-210ENST00000597965 PAX4O43316 350 aa11.69□□□□□ -0.54
PNKP-210ENST00000597965 MPDU1O75352 247 aa11.69□□□□□ -0.54
PNKP-210ENST00000597965 ATP6V0CP27449 155 aa11.69□□□□□ -0.54
PNKP-210ENST00000597965 RPL29P47914 159 aaKnown RBP11.69□□□□□ -0.54
PNKP-210ENST00000597965 HSD17B11Q8NBQ5 300 aa11.69□□□□□ -0.54
PNKP-210ENST00000597965 C11orf72Q8NBR9 251 aa11.69□□□□□ -0.54
PNKP-210ENST00000597965 SH3BGRL3Q9H299 93 aa11.69□□□□□ -0.54
PNKP-210ENST00000597965 TIMM9Q9Y5J7 89 aa11.69□□□□□ -0.54
PNKP-210ENST00000597965 TRBV19A0A075B6N1 114 aa11.68□□□□□ -0.54
PNKP-210ENST00000597965 ZNF324O75467 553 aaPredicted RBP11.68□□□□□ -0.54
PNKP-210ENST00000597965 IFNA5P01569 189 aa11.68□□□□□ -0.54
PNKP-210ENST00000597965 GPX1P07203 203 aa11.68□□□□□ -0.54
PNKP-210ENST00000597965 HIST1H1EP10412 219 aaKnown RBP11.68□□□□□ -0.54
PNKP-210ENST00000597965 MIC13Q5XKP0 118 aa11.68□□□□□ -0.54
PNKP-210ENST00000597965 SLC39A9Q9NUM3 307 aa11.68□□□□□ -0.54
PNKP-210ENST00000597965 TMEM14CQ9P0S9 112 aa11.68□□□□□ -0.54
PNKP-210ENST00000597965 PRO0255Q9UI72 69 aa11.68□□□□□ -0.54
PNKP-210ENST00000597965 WDR83OSQ9Y284 106 aa11.68□□□□□ -0.54
PNKP-210ENST00000597965 APOBP04114 4563 aaKnown RBP11.68□□□□□ -0.54
PNKP-210ENST00000597965 SPINK4O60575 86 aa11.67□□□□□ -0.54
PNKP-210ENST00000597965 TCL1AP56279 114 aa11.67□□□□□ -0.54
PNKP-210ENST00000597965 VWC2Q2TAL6 325 aa11.67□□□□□ -0.54
PNKP-210ENST00000597965 TMEM78Q5T7P6 136 aa11.67□□□□□ -0.54
PNKP-210ENST00000597965 DNAH5Q8TE73 4624 aa11.67□□□□□ -0.54
PNKP-210ENST00000597965 TRAV5A0A0B4J249 113 aa11.66□□□□□ -0.54
PNKP-210ENST00000597965 NXPH4O95158 308 aa11.66□□□□□ -0.54
PNKP-210ENST00000597965 CRISP2P16562 243 aa11.66□□□□□ -0.54
PNKP-210ENST00000597965 RNASE4P34096 147 aaKnown RBP11.66□□□□□ -0.54
PNKP-210ENST00000597965 RAB5CP51148 216 aa11.66□□□□□ -0.54
PNKP-210ENST00000597965 BLOC1S1P78537 153 aa11.66□□□□□ -0.54
PNKP-210ENST00000597965 MRPL23Q16540 153 aaKnown RBP11.66□□□□□ -0.54
PNKP-210ENST00000597965 Q6ZRN7 208 aaPredicted RBP11.66□□□□□ -0.54
PNKP-210ENST00000597965 OR2G3Q8NGZ4 309 aa11.66□□□□□ -0.54
PNKP-210ENST00000597965 SCGB1C1Q8TD33 95 aa11.66□□□□□ -0.54
PNKP-210ENST00000597965 FAM19A4Q96LR4 140 aa11.66□□□□□ -0.54
PNKP-210ENST00000597965 M0R3E3 92 aa11.65□□□□□ -0.54
PNKP-210ENST00000597965 C9orf47Q6ZRZ4 202 aa11.65□□□□□ -0.54
PNKP-210ENST00000597965 WDR61Q9GZS3 305 aaKnown RBP11.65□□□□□ -0.54
PNKP-210ENST00000597965 AGPAT4-IT1Q9H0P7 198 aa11.65□□□□□ -0.54
PNKP-210ENST00000597965 HHLA3Q9XRX5 114 aa11.65□□□□□ -0.54
PNKP-210ENST00000597965 ERCC8Q13216 396 aa11.64□□□□□ -0.55
PNKP-210ENST00000597965 BTN1A1Q13410 526 aa11.64□□□□□ -0.55
PNKP-210ENST00000597965 NEGR1Q7Z3B1 354 aa11.64□□□□□ -0.55
PNKP-210ENST00000597965 VGLL1Q99990 258 aa11.64□□□□□ -0.55
PNKP-210ENST00000597965 KLF12Q9Y4X4 402 aa11.64□□□□□ -0.55
PNKP-210ENST00000597965 LY96Q9Y6Y9 160 aa11.64□□□□□ -0.55
PNKP-210ENST00000597965 IGHV1OR15-1A0A075B7D0 117 aa11.63□□□□□ -0.55
PNKP-210ENST00000597965 TRBV7-9A0A0J9YWB2 115 aa11.63□□□□□ -0.55
PNKP-210ENST00000597965 UBE2L5PA0A1B0GUS4 154 aa11.63□□□□□ -0.55
PNKP-210ENST00000597965 UMAD1C9J7I0 102 aa11.63□□□□□ -0.55
PNKP-210ENST00000597965 TEX46H3BTG2 121 aa11.63□□□□□ -0.55
PNKP-210ENST00000597965 LYPD1Q8N2G4 141 aa11.63□□□□□ -0.55
PNKP-210ENST00000597965 LYPD6BQ8NI32 183 aa11.63□□□□□ -0.55
PNKP-210ENST00000597965 FRZBQ92765 325 aa11.63□□□□□ -0.55
PNKP-210ENST00000597965 PSMG3Q9BT73 122 aaPredicted RBP11.63□□□□□ -0.55
PNKP-210ENST00000597965 FGF7P21781 194 aa11.62□□□□□ -0.55
PNKP-210ENST00000597965 CRYBA4P53673 196 aa11.62□□□□□ -0.55
PNKP-210ENST00000597965 ZNF415Q09FC8 603 aa11.62□□□□□ -0.55
PNKP-210ENST00000597965 LYPD5Q6UWN5 251 aa11.62□□□□□ -0.55
PNKP-210ENST00000597965 BLNKQ8WV28 456 aa11.62□□□□□ -0.55
PNKP-210ENST00000597965 RAB19A4D1S5 217 aa11.61□□□□□ -0.55
PNKP-210ENST00000597965 NDUFB4O95168 129 aa11.61□□□□□ -0.55
PNKP-210ENST00000597965 INAFM2P0DMQ5 153 aa11.61□□□□□ -0.55
PNKP-210ENST00000597965 EVI2AP22794 236 aa11.61□□□□□ -0.55
PNKP-210ENST00000597965 FHITP49789 147 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms