RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 Q6ZQT7 251 aa11.84□□□□□ -0.51
ZNF541-205ENST00000595558 A1L4Q6 167 aa11.84□□□□□ -0.51
ZNF541-205ENST00000595558 COX8CQ7Z4L0 72 aa11.84□□□□□ -0.51
ZNF541-205ENST00000595558 IGHV3-49A0A0A0MS15 119 aa11.83□□□□□ -0.52
ZNF541-205ENST00000595558 PPBPP02775 128 aa11.83□□□□□ -0.52
ZNF541-205ENST00000595558 IL17RELQ6ZVW7 336 aa11.83□□□□□ -0.52
ZNF541-205ENST00000595558 NBPF19A0A087WUL8 3843 aa11.83□□□□□ -0.52
ZNF541-205ENST00000595558 LEPP41159 167 aa11.83□□□□□ -0.52
ZNF541-205ENST00000595558 OR1N2Q8NGR9 330 aa11.83□□□□□ -0.52
ZNF541-205ENST00000595558 DPF1Q92782 380 aa11.83□□□□□ -0.52
ZNF541-205ENST00000595558 IGHV7-81A0A0B4J1V7 117 aa11.82□□□□□ -0.52
ZNF541-205ENST00000595558 G3V318 75 aa11.82□□□□□ -0.52
ZNF541-205ENST00000595558 RPS20P60866 119 aaKnown RBP11.82□□□□□ -0.52
ZNF541-205ENST00000595558 UFSP1Q6NVU6 142 aa11.82□□□□□ -0.52
ZNF541-205ENST00000595558 TMEM219Q86XT9 240 aa11.82□□□□□ -0.52
ZNF541-205ENST00000595558 ZNF48Q96MX3 618 aaPredicted RBP11.82□□□□□ -0.52
ZNF541-205ENST00000595558 C9orf118A6NHY6 69 aa11.82□□□□□ -0.52
ZNF541-205ENST00000595558 S100A7P31151 101 aa11.82□□□□□ -0.52
ZNF541-205ENST00000595558 ITLN2Q8WWU7 325 aaPredicted RBP11.82□□□□□ -0.52
ZNF541-205ENST00000595558 C11orf21Q9P2W6 132 aa11.82□□□□□ -0.52
ZNF541-205ENST00000595558 ZNF469Q96JG9 3925 aaPredicted RBP11.81□□□□□ -0.52
ZNF541-205ENST00000595558 K7EMI3 77 aa11.81□□□□□ -0.52
ZNF541-205ENST00000595558 ECSCRQ19T08 205 aa11.81□□□□□ -0.52
ZNF541-205ENST00000595558 H3BRM9 83 aa11.81□□□□□ -0.52
ZNF541-205ENST00000595558 TNFRSF6BO95407 300 aa11.81□□□□□ -0.52
ZNF541-205ENST00000595558 BMI1P35226 326 aa11.81□□□□□ -0.52
ZNF541-205ENST00000595558 Q8N6K4 173 aa11.81□□□□□ -0.52
ZNF541-205ENST00000595558 AJUBAQ96IF1 538 aa11.81□□□□□ -0.52
ZNF541-205ENST00000595558 A0A0G2JLM5 398 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 M0R1W7 72 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 TRGV3P03979 118 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 TMEM11P17152 192 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 BRD3OSQ6XYD6 125 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 NRGNQ92686 78 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 CREBBPQ92793 2442 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 IGKV3D-20A0A0C4DH25 116 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 ZNF207O43670 478 aaKnown RBP11.8□□□□□ -0.52
ZNF541-205ENST00000595558 HSD52Q0P140 79 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 C15orf32Q32M92 178 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 MAP1LC3AQ9H492 121 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 HHLA3Q9XRX5 114 aa11.8□□□□□ -0.52
ZNF541-205ENST00000595558 TRAV26-2A0A0B4J265 109 aa11.79□□□□□ -0.52
ZNF541-205ENST00000595558 FABP5P3A8MUU1 101 aa11.79□□□□□ -0.52
ZNF541-205ENST00000595558 CLEC3BP05452 202 aa11.79□□□□□ -0.52
ZNF541-205ENST00000595558 SAA4P35542 130 aa11.79□□□□□ -0.52
ZNF541-205ENST00000595558 ODF1Q14990 250 aa11.79□□□□□ -0.52
ZNF541-205ENST00000595558 S100A7AQ86SG5 101 aa11.79□□□□□ -0.52
ZNF541-205ENST00000595558 DTX2Q86UW9 622 aa11.79□□□□□ -0.52
ZNF541-205ENST00000595558 TMEM190Q8WZ59 177 aa11.79□□□□□ -0.52
ZNF541-205ENST00000595558 A6NDN8 102 aa11.79□□□□□ -0.52
ZNF541-205ENST00000595558 AP1S3Q96PC3 154 aa11.79□□□□□ -0.52
ZNF541-205ENST00000595558 MEGF9Q9H1U4 602 aa11.79□□□□□ -0.52
ZNF541-205ENST00000595558 Q8N9W7 124 aa11.78□□□□□ -0.52
ZNF541-205ENST00000595558 OR9G4Q8NGQ1 327 aa11.78□□□□□ -0.52
ZNF541-205ENST00000595558 TMEM158Q8WZ71 300 aa11.78□□□□□ -0.52
ZNF541-205ENST00000595558 SIRPDQ9H106 197 aa11.78□□□□□ -0.52
ZNF541-205ENST00000595558 PRSS1P07477 247 aa11.78□□□□□ -0.52
ZNF541-205ENST00000595558 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.78□□□□□ -0.52
ZNF541-205ENST00000595558 GTSCR1Q86UQ5 136 aa11.78□□□□□ -0.52
ZNF541-205ENST00000595558 ZFAND3Q9H8U3 227 aa11.78□□□□□ -0.52
ZNF541-205ENST00000595558 ANKRD17O75179 2603 aaKnown RBP11.78□□□□□ -0.52
ZNF541-205ENST00000595558 SETD2Q9BYW2 2564 aaPredicted RBP11.77□□□□□ -0.52
ZNF541-205ENST00000595558 TEX15Q9BXT5 2789 aa11.77□□□□□ -0.52
ZNF541-205ENST00000595558 FBLL1A6NHQ2 334 aaKnown RBP11.77□□□□□ -0.52
ZNF541-205ENST00000595558 K7ERJ3 54 aa11.77□□□□□ -0.52
ZNF541-205ENST00000595558 BUB3O43684 328 aa11.77□□□□□ -0.52
ZNF541-205ENST00000595558 FXYD2P54710 66 aa11.77□□□□□ -0.52
ZNF541-205ENST00000595558 RIPPLY3P57055 190 aa11.77□□□□□ -0.52
ZNF541-205ENST00000595558 LMO4P61968 165 aa11.77□□□□□ -0.52
ZNF541-205ENST00000595558 COTL1Q14019 142 aa11.77□□□□□ -0.52
ZNF541-205ENST00000595558 CNFNQ9BYD5 112 aa11.77□□□□□ -0.52
ZNF541-205ENST00000595558 AGPAT4-IT1Q9H0P7 198 aa11.77□□□□□ -0.52
ZNF541-205ENST00000595558 CLPSL1A2RUU4 121 aa11.77□□□□□ -0.53
ZNF541-205ENST00000595558 SPRY2O43597 315 aa11.77□□□□□ -0.53
ZNF541-205ENST00000595558 K7EP34 96 aa11.76□□□□□ -0.53
ZNF541-205ENST00000595558 GCSHP23434 173 aa11.76□□□□□ -0.53
ZNF541-205ENST00000595558 FCER1GP30273 86 aa11.76□□□□□ -0.53
ZNF541-205ENST00000595558 FOXC2Q99958 501 aa11.76□□□□□ -0.53
ZNF541-205ENST00000595558 CLEC19AQ6UXS0 136 aa11.76□□□□□ -0.53
ZNF541-205ENST00000595558 OR4X2Q8NGF9 303 aa11.76□□□□□ -0.53
ZNF541-205ENST00000595558 OR2K2Q8NGT1 345 aa11.76□□□□□ -0.53
ZNF541-205ENST00000595558 ZNF502Q8TBZ5 544 aa11.76□□□□□ -0.53
ZNF541-205ENST00000595558 SIVA1O15304 175 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 ATP6V0E1O15342 81 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 IGHV4-39P01824 125 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 EBI3Q14213 229 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 LINC01559Q495D7 138 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 CCDC144NLQ6NUI1 221 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 PRORYQ9H606 182 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 K7ERU9 68 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 CCDC140Q96MF4 163 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 ZMAT4Q9H898 229 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 NF1P21359 2839 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 SONP18583 2426 aaKnown RBP11.75□□□□□ -0.53
ZNF541-205ENST00000595558 MYO9AB2RTY4 2548 aa11.75□□□□□ -0.53
ZNF541-205ENST00000595558 IGLV2-18A0A075B6J9 118 aa11.74□□□□□ -0.53
ZNF541-205ENST00000595558 TRAV8-2A0A0B4J237 113 aa11.74□□□□□ -0.53
ZNF541-205ENST00000595558 A0A1W2PPM0 123 aa11.74□□□□□ -0.53
ZNF541-205ENST00000595558 EFNA4P52798 201 aa11.74□□□□□ -0.53
ZNF541-205ENST00000595558 GTF2H5Q6ZYL4 71 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms