RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 GAGE12BA1L429 117 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 C16orf90A8MZG2 172 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 OR7C2O60412 319 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 GAGE7O76087 117 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 IFNA7P01567 189 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 GAGE12FP0CL80 117 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 GAGE12GP0CL81 117 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 GAGE12IP0CL82 117 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 RPL12P30050 165 aaKnown RBP9.2□□□□□ -0.94
H3F3B-213ENST00000593254 ZNF345Q14585 488 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 TMEM78Q5T7P6 136 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 ZFAND2AQ8N6M9 145 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 C11orf72Q8NBR9 251 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 ZNF680Q8NEM1 530 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 ZNRF2Q8NHG8 242 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 VGLL1Q99990 258 aa9.2□□□□□ -0.94
H3F3B-213ENST00000593254 MYCBP2O75592 4640 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 TRAV26-1A0A087WT03 109 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 IFNA5P01569 189 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 GPX1P07203 203 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 M6PRP20645 277 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 HOXA5P20719 270 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 RNASE4P34096 147 aaKnown RBP9.19□□□□□ -0.94
H3F3B-213ENST00000593254 CCL18P55774 89 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 OR5I1Q13606 314 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 ANXA2RQ3ZCQ2 193 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 FFAR4Q5NUL3 377 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 PRR9Q5T870 116 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 C1orf134Q5TEV5 83 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 Q6ZTI0 123 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 LYPD1Q8N2G4 141 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 SMIM3Q9BZL3 60 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 GSN-AS1Q9NRJ2 163 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 ZNF492Q9P255 531 aa9.19□□□□□ -0.94
H3F3B-213ENST00000593254 TRBV7-9A0A0J9YWB2 115 aa9.18□□□□□ -0.94
H3F3B-213ENST00000593254 UBE2L3P68036 154 aaKnown RBP9.18□□□□□ -0.94
H3F3B-213ENST00000593254 CLLU1Q5K131 121 aa9.18□□□□□ -0.94
H3F3B-213ENST00000593254 VPS13BQ7Z7G8 4022 aa9.18□□□□□ -0.94
H3F3B-213ENST00000593254 EIF4E3Q8N5X7 224 aaKnown RBP9.18□□□□□ -0.94
H3F3B-213ENST00000593254 SCGB1C1Q8TD33 95 aa9.18□□□□□ -0.94
H3F3B-213ENST00000593254 RXFP4Q8TDU9 374 aa9.18□□□□□ -0.94
H3F3B-213ENST00000593254 GNPNAT1Q96EK6 184 aaPredicted RBP9.18□□□□□ -0.94
H3F3B-213ENST00000593254 C18orf15Q96N68 181 aa9.18□□□□□ -0.94
H3F3B-213ENST00000593254 LINC00588Q9Y4M8 146 aa9.18□□□□□ -0.94
H3F3B-213ENST00000593254 A0A0D9SG52 128 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 NBDYA0A0U1RRE5 68 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 RBAKDNA6NC62 111 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 LINC00862A6NCI5 91 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 H3BNG1 76 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 ZNF138P52744 262 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 TCL1AP56279 114 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 TAS2R45P59539 299 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 RANP62826 216 aaKnown RBP9.17□□□□□ -0.94
H3F3B-213ENST00000593254 KHDC3LQ587J8 217 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 Q8TAT8 98 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 Q9H3A6 140 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 TMPRSS5Q9H3S3 457 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 WFDC1Q9HC57 220 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 SCRT2Q9NQ03 307 aa9.17□□□□□ -0.94
H3F3B-213ENST00000593254 SRRM2Q9UQ35 2752 aaKnown RBP9.16□□□□□ -0.94
H3F3B-213ENST00000593254 A0A0J9YY99 117 aa9.16□□□□□ -0.94
H3F3B-213ENST00000593254 CSN1S1P47710 185 aa9.16□□□□□ -0.94
H3F3B-213ENST00000593254 TNP2Q05952 138 aa9.16□□□□□ -0.94
H3F3B-213ENST00000593254 IBA57Q5T440 356 aaKnown RBP9.16□□□□□ -0.94
H3F3B-213ENST00000593254 Q6ZQT7 251 aa9.16□□□□□ -0.94
H3F3B-213ENST00000593254 SSX7Q7RTT5 188 aa9.16□□□□□ -0.94
H3F3B-213ENST00000593254 TP53TG3Q9ULZ0 132 aa9.16□□□□□ -0.94
H3F3B-213ENST00000593254 KLF12Q9Y4X4 402 aa9.16□□□□□ -0.94
H3F3B-213ENST00000593254 TRGV2A0A075B6R0 118 aa9.15□□□□□ -0.94
H3F3B-213ENST00000593254 IGHV1OR15-1A0A075B7D0 117 aa9.15□□□□□ -0.94
H3F3B-213ENST00000593254 TRGV1A0A0A0MS02 117 aa9.15□□□□□ -0.94
H3F3B-213ENST00000593254 SPINK4O60575 86 aa9.15□□□□□ -0.94
H3F3B-213ENST00000593254 SLC51BQ86UW2 128 aa9.15□□□□□ -0.94
H3F3B-213ENST00000593254 SLC7A5P1Q8MH63 180 aa9.15□□□□□ -0.94
H3F3B-213ENST00000593254 MED9Q9NWA0 146 aa9.15□□□□□ -0.94
H3F3B-213ENST00000593254 TNFSF18Q9UNG2 199 aa9.15□□□□□ -0.94
H3F3B-213ENST00000593254 FAT1Q14517 4588 aa9.15□□□□□ -0.94
H3F3B-213ENST00000593254 DIRC3C9JPN6 131 aa9.14□□□□□ -0.95
H3F3B-213ENST00000593254 ARPC5O15511 151 aa9.14□□□□□ -0.95
H3F3B-213ENST00000593254 EIF3GO75821 320 aaKnown RBP eCLIP9.14□□□□□ -0.955e-18■■□□□ 12.1
H3F3B-213ENST00000593254 RAB14P61106 215 aa9.14□□□□□ -0.95
H3F3B-213ENST00000593254 ZNF266Q14584 549 aa9.14□□□□□ -0.95
H3F3B-213ENST00000593254 ACOT6Q3I5F7 207 aaPredicted RBP9.14□□□□□ -0.95
H3F3B-213ENST00000593254 PQLC2Q6ZP29 291 aa9.14□□□□□ -0.95
H3F3B-213ENST00000593254 TMUB2Q71RG4 321 aa9.14□□□□□ -0.95
H3F3B-213ENST00000593254 KCNRGQ8N5I3 272 aa9.14□□□□□ -0.95
H3F3B-213ENST00000593254 VSIG2Q96IQ7 327 aa9.14□□□□□ -0.95
H3F3B-213ENST00000593254 LENEPQ9Y5L5 61 aa9.14□□□□□ -0.95
H3F3B-213ENST00000593254 FXYD6-FXYD2A0A087WZ82 144 aa9.13□□□□□ -0.95
H3F3B-213ENST00000593254 RAB2AP61019 212 aa9.13□□□□□ -0.95
H3F3B-213ENST00000593254 Q6AWC8 147 aa9.13□□□□□ -0.95
H3F3B-213ENST00000593254 TMED6Q8WW62 240 aa9.13□□□□□ -0.95
H3F3B-213ENST00000593254 ARPC5LQ9BPX5 153 aa9.13□□□□□ -0.95
H3F3B-213ENST00000593254 UPK3BQ9BT76 320 aa9.13□□□□□ -0.95
H3F3B-213ENST00000593254 Q9H8V8 135 aa9.13□□□□□ -0.95
H3F3B-213ENST00000593254 OTORQ9NRC9 128 aa9.13□□□□□ -0.95
H3F3B-213ENST00000593254 A0A1W2PPV4 95 aa9.12□□□□□ -0.95
H3F3B-213ENST00000593254 ESRGQ1W209 222 aa9.12□□□□□ -0.95
H3F3B-213ENST00000593254 C6orf223Q8N319 242 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms