RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 A0A0J9YX75 114 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 DUSP14O95147 198 aaKnown RBP10.01□□□□□ -0.81
VMP1-217ENST00000593168 ZNF705DP0CH99 300 aaPredicted RBP10.01□□□□□ -0.81
VMP1-217ENST00000593168 ZNF705BP0CI00 300 aaPredicted RBP10.01□□□□□ -0.81
VMP1-217ENST00000593168 CRIP1P50238 77 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 DEFB131AP59861 70 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 DEFB1P60022 68 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 C9orf66Q5T8R8 295 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 PRR27Q6MZM9 219 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 LINC00322Q6ZN03 302 aaPredicted RBP10.01□□□□□ -0.81
VMP1-217ENST00000593168 DAZAP1Q96EP5 407 aaKnown RBP10.01□□□□□ -0.81
VMP1-217ENST00000593168 FAM19A4Q96LR4 140 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 C8orf49Q96NF6 230 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 ASCL2Q99929 193 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 MCRIP2Q9BUT9 160 aaKnown RBP10.01□□□□□ -0.81
VMP1-217ENST00000593168 GPR61Q9BZJ8 451 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 RNASE7Q9H1E1 156 aaKnown RBP10.01□□□□□ -0.81
VMP1-217ENST00000593168 SAV1Q9H4B6 383 aaPredicted RBP10.01□□□□□ -0.81
VMP1-217ENST00000593168 V9GYV3 84 aa10.01□□□□□ -0.81
VMP1-217ENST00000593168 GATCO43716 136 aaKnown RBP10□□□□□ -0.81
VMP1-217ENST00000593168 CRISP2P16562 243 aa10□□□□□ -0.81
VMP1-217ENST00000593168 ODF3Q96PU9 254 aa10□□□□□ -0.81
VMP1-217ENST00000593168 MAP6D1Q9H9H5 199 aa10□□□□□ -0.81
VMP1-217ENST00000593168 ZNF705GA8MUZ8 300 aaPredicted RBP9.99□□□□□ -0.81
VMP1-217ENST00000593168 P01737 135 aa9.99□□□□□ -0.81
VMP1-217ENST00000593168 PFN1P07737 140 aaKnown RBP9.99□□□□□ -0.81
VMP1-217ENST00000593168 CT83Q5H943 113 aa9.99□□□□□ -0.81
VMP1-217ENST00000593168 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
VMP1-217ENST00000593168 OR4B1Q8NGF8 309 aa9.99□□□□□ -0.81
VMP1-217ENST00000593168 FAM110AQ9BQ89 295 aa9.99□□□□□ -0.81
VMP1-217ENST00000593168 IL36BQ9NZH7 164 aa9.99□□□□□ -0.81
VMP1-217ENST00000593168 FABP5P3A8MUU1 101 aa9.98□□□□□ -0.81
VMP1-217ENST00000593168 CD33P20138 364 aa9.98□□□□□ -0.81
VMP1-217ENST00000593168 S100PP25815 95 aa9.98□□□□□ -0.81
VMP1-217ENST00000593168 ODF3L2Q3SX64 289 aa9.98□□□□□ -0.81
VMP1-217ENST00000593168 FAM162BQ5T6X4 162 aa9.98□□□□□ -0.81
VMP1-217ENST00000593168 APRG1Q8IVJ8 170 aa9.98□□□□□ -0.81
VMP1-217ENST00000593168 ZFAND2AQ8N6M9 145 aa9.98□□□□□ -0.81
VMP1-217ENST00000593168 YPEL4Q96NS1 127 aa9.98□□□□□ -0.81
VMP1-217ENST00000593168 RPP21Q9H633 154 aaKnown RBP9.98□□□□□ -0.81
VMP1-217ENST00000593168 NOTCH3Q9UM47 2321 aa9.98□□□□□ -0.81
VMP1-217ENST00000593168 COLCA2A8K830 154 aa9.97□□□□□ -0.81
VMP1-217ENST00000593168 A8MTW9 85 aa9.97□□□□□ -0.81
VMP1-217ENST00000593168 SH2D1AO60880 128 aa9.97□□□□□ -0.81
VMP1-217ENST00000593168 HLA-DRB4P13762 266 aa9.97□□□□□ -0.81
VMP1-217ENST00000593168 ZNF80P51504 273 aaPredicted RBP9.97□□□□□ -0.81
VMP1-217ENST00000593168 ELOBQ15370 118 aa9.97□□□□□ -0.81
VMP1-217ENST00000593168 KCNIP4Q6PIL6 250 aa9.97□□□□□ -0.81
VMP1-217ENST00000593168 CLUHP3Q96NS8 147 aa9.97□□□□□ -0.81
VMP1-217ENST00000593168 HLA-DRB4X5D2U9 266 aa9.97□□□□□ -0.81
VMP1-217ENST00000593168 TRBV24-1A0A075B6N3 115 aa9.96□□□□□ -0.82
VMP1-217ENST00000593168 TRAV9-1A0A075B6T8 112 aa9.96□□□□□ -0.82
VMP1-217ENST00000593168 A8MWL6 223 aa9.96□□□□□ -0.82
VMP1-217ENST00000593168 OR11H12B2RN74 326 aa9.96□□□□□ -0.82
VMP1-217ENST00000593168 H3BMM0 161 aa9.96□□□□□ -0.82
VMP1-217ENST00000593168 LEPP41159 167 aa9.96□□□□□ -0.82
VMP1-217ENST00000593168 TSKUQ8WUA8 353 aa9.96□□□□□ -0.82
VMP1-217ENST00000593168 PYGO2Q9BRQ0 406 aa9.96□□□□□ -0.82
VMP1-217ENST00000593168 SMIM27A0A1W2PRY6 76 aa9.95□□□□□ -0.82
VMP1-217ENST00000593168 FAM231BA6NCW3 169 aa9.95□□□□□ -0.82
VMP1-217ENST00000593168 KNCNA6PVL3 124 aa9.95□□□□□ -0.82
VMP1-217ENST00000593168 KLLNB2CW77 178 aa9.95□□□□□ -0.82
VMP1-217ENST00000593168 GPX1P07203 203 aa9.95□□□□□ -0.82
VMP1-217ENST00000593168 TSPOP30536 169 aa9.95□□□□□ -0.82
VMP1-217ENST00000593168 ACTL10Q5JWF8 245 aa9.95□□□□□ -0.82
VMP1-217ENST00000593168 OR2D3Q8NGH3 330 aa9.95□□□□□ -0.82
VMP1-217ENST00000593168 BTF3L4Q96K17 158 aa9.95□□□□□ -0.82
VMP1-217ENST00000593168 URGCP-MRPS24S4R325 110 aa9.95□□□□□ -0.82
VMP1-217ENST00000593168 TENM3Q9P273 2699 aa9.95□□□□□ -0.82
VMP1-217ENST00000593168 TRAV21A0A0B4J279 112 aa9.94□□□□□ -0.82
VMP1-217ENST00000593168 K7EIL1 84 aa9.94□□□□□ -0.82
VMP1-217ENST00000593168 CA1P00915 261 aaPredicted RBP9.94□□□□□ -0.82
VMP1-217ENST00000593168 FAM3BP58499 235 aaPredicted RBP9.94□□□□□ -0.82
VMP1-217ENST00000593168 RPS20P60866 119 aaKnown RBP9.94□□□□□ -0.82
VMP1-217ENST00000593168 PRR9Q5T870 116 aa9.94□□□□□ -0.82
VMP1-217ENST00000593168 Q6AWC8 147 aa9.94□□□□□ -0.82
VMP1-217ENST00000593168 AMTNQ6UX39 209 aa9.94□□□□□ -0.82
VMP1-217ENST00000593168 GFRA4Q9GZZ7 299 aa9.94□□□□□ -0.82
VMP1-217ENST00000593168 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
VMP1-217ENST00000593168 AGRNO00468 2067 aa9.94□□□□□ -0.82
VMP1-217ENST00000593168 XKRY2A2RUG3 117 aa9.93□□□□□ -0.82
VMP1-217ENST00000593168 TMEM189A5PLL7 270 aa9.93□□□□□ -0.82
VMP1-217ENST00000593168 CD7P09564 240 aa9.93□□□□□ -0.82
VMP1-217ENST00000593168 CDKN1BP46527 198 aa9.93□□□□□ -0.82
VMP1-217ENST00000593168 FOXA3P55318 350 aaPredicted RBP9.93□□□□□ -0.82
VMP1-217ENST00000593168 ZNF124Q15973 351 aa9.93□□□□□ -0.82
VMP1-217ENST00000593168 LINC01559Q495D7 138 aa9.93□□□□□ -0.82
VMP1-217ENST00000593168 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.93□□□□□ -0.82
VMP1-217ENST00000593168 NAT8BQ9UHF3 227 aa9.93□□□□□ -0.82
VMP1-217ENST00000593168 RYR2Q92736 4967 aa9.92□□□□□ -0.82
VMP1-217ENST00000593168 TGIF2-C20orf24A0A0A6YYL0 155 aa9.92□□□□□ -0.82
VMP1-217ENST00000593168 A0A1W2PPQ1 181 aa9.92□□□□□ -0.82
VMP1-217ENST00000593168 IGKV3-20P01619 116 aa9.92□□□□□ -0.82
VMP1-217ENST00000593168 ORM1P02763 201 aa9.92□□□□□ -0.82
VMP1-217ENST00000593168 CXCL1P09341 107 aa9.92□□□□□ -0.82
VMP1-217ENST00000593168 IGLL1P15814 213 aa9.92□□□□□ -0.82
VMP1-217ENST00000593168 RNASE4P34096 147 aaKnown RBP9.92□□□□□ -0.82
VMP1-217ENST00000593168 RPL19P84098 196 aaKnown RBP9.92□□□□□ -0.82
VMP1-217ENST00000593168 FAM210BQ96KR6 192 aa9.92□□□□□ -0.82
VMP1-217ENST00000593168 NEU1Q99519 415 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms