RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 NMBP08949 121 aa12.35□□□□□ -0.43
CIRBP-243ENST00000593128 UBE2L3P68036 154 aaKnown RBP12.35□□□□□ -0.43
CIRBP-243ENST00000593128 ZNF415Q09FC8 603 aa12.35□□□□□ -0.43
CIRBP-243ENST00000593128 FFAR4Q5NUL3 377 aa12.35□□□□□ -0.43
CIRBP-243ENST00000593128 IBA57Q5T440 356 aaKnown RBP12.35□□□□□ -0.43
CIRBP-243ENST00000593128 ST6GAL2Q96JF0 529 aa12.35□□□□□ -0.43
CIRBP-243ENST00000593128 SMIM3Q9BZL3 60 aa12.35□□□□□ -0.43
CIRBP-243ENST00000593128 RPH3ALQ9UNE2 315 aa12.35□□□□□ -0.43
CIRBP-243ENST00000593128 LRP1BQ9NZR2 4599 aa12.35□□□□□ -0.43
CIRBP-243ENST00000593128 INMT-MINDY4F8WBC2 141 aa12.34□□□□□ -0.43
CIRBP-243ENST00000593128 EIF3GO75821 320 aaKnown RBP eCLIP12.34□□□□□ -0.43
CIRBP-243ENST00000593128 LINC00315P59091 139 aa12.34□□□□□ -0.43
CIRBP-243ENST00000593128 CYCSP99999 105 aaKnown RBP12.34□□□□□ -0.43
CIRBP-243ENST00000593128 HYLS1Q96M11 299 aa12.34□□□□□ -0.43
CIRBP-243ENST00000593128 C8orf49Q96NF6 230 aa12.34□□□□□ -0.43
CIRBP-243ENST00000593128 ATP5SQ99766 215 aa12.34□□□□□ -0.43
CIRBP-243ENST00000593128 SIVA1O15304 175 aa12.33□□□□□ -0.44
CIRBP-243ENST00000593128 SSNA1O43805 119 aa12.33□□□□□ -0.44
CIRBP-243ENST00000593128 PRAF2O60831 178 aa12.33□□□□□ -0.44
CIRBP-243ENST00000593128 NXPH4O95158 308 aa12.33□□□□□ -0.44
CIRBP-243ENST00000593128 KRTAP10-2P60368 255 aa12.33□□□□□ -0.44
CIRBP-243ENST00000593128 SCGB1C1Q8TD33 95 aa12.33□□□□□ -0.44
CIRBP-243ENST00000593128 PPP1R1CQ8WVI7 109 aa12.33□□□□□ -0.44
CIRBP-243ENST00000593128 C18orf15Q96N68 181 aa12.33□□□□□ -0.44
CIRBP-243ENST00000593128 NAGKQ9UJ70 344 aa12.33□□□□□ -0.44
CIRBP-243ENST00000593128 TRGV4A0A0C4DH28 118 aa12.32□□□□□ -0.44
CIRBP-243ENST00000593128 H2BFSP57053 126 aa12.32□□□□□ -0.44
CIRBP-243ENST00000593128 PRO0255Q9UI72 69 aa12.32□□□□□ -0.44
CIRBP-243ENST00000593128 HHLA3Q9XRX5 114 aa12.32□□□□□ -0.44
CIRBP-243ENST00000593128 IFNA5P01569 189 aa12.31□□□□□ -0.44
CIRBP-243ENST00000593128 TMEM183BQ1AE95 376 aa12.31□□□□□ -0.44
CIRBP-243ENST00000593128 KHDC3LQ587J8 217 aa12.31□□□□□ -0.44
CIRBP-243ENST00000593128 TMEM183AQ8IXX5 376 aa12.31□□□□□ -0.44
CIRBP-243ENST00000593128 MDFICQ9P1T7 246 aa12.31□□□□□ -0.44
CIRBP-243ENST00000593128 PTTG1O95997 202 aa12.3□□□□□ -0.44
CIRBP-243ENST00000593128 SFTA3P0C7M3 94 aa12.3□□□□□ -0.44
CIRBP-243ENST00000593128 CRYBA4P53673 196 aa12.3□□□□□ -0.44
CIRBP-243ENST00000593128 TAS2R45P59539 299 aa12.3□□□□□ -0.44
CIRBP-243ENST00000593128 RGS21Q2M5E4 152 aa12.3□□□□□ -0.44
CIRBP-243ENST00000593128 HSPB11Q9Y547 144 aa12.3□□□□□ -0.44
CIRBP-243ENST00000593128 PET100P0DJ07 73 aa12.29□□□□□ -0.44
CIRBP-243ENST00000593128 RPL12P30050 165 aaKnown RBP12.29□□□□□ -0.44
CIRBP-243ENST00000593128 FUSP35637 526 aaKnown RBP eCLIP12.29□□□□□ -0.44
CIRBP-243ENST00000593128 SLAQ13239 276 aa12.29□□□□□ -0.44
CIRBP-243ENST00000593128 FHL2Q14192 279 aa12.29□□□□□ -0.44
CIRBP-243ENST00000593128 ZNF266Q14584 549 aa12.29□□□□□ -0.44
CIRBP-243ENST00000593128 FAM159AQ6UWV7 190 aa12.29□□□□□ -0.44
CIRBP-243ENST00000593128 CMTM2Q8TAZ6 248 aa12.29□□□□□ -0.44
CIRBP-243ENST00000593128 PCNPQ8WW12 178 aaKnown RBP12.29□□□□□ -0.44
CIRBP-243ENST00000593128 TNFRSF18Q9Y5U5 241 aa12.29□□□□□ -0.44
CIRBP-243ENST00000593128 APOBP04114 4563 aaKnown RBP12.28□□□□□ -0.44
CIRBP-243ENST00000593128 RBAKDNA6NC62 111 aa12.28□□□□□ -0.44
CIRBP-243ENST00000593128 DIRC3C9JPN6 131 aa12.28□□□□□ -0.44
CIRBP-243ENST00000593128 MPC2O95563 127 aa12.28□□□□□ -0.44
CIRBP-243ENST00000593128 BTF3P20290 206 aaKnown RBP12.28□□□□□ -0.44
CIRBP-243ENST00000593128 MRPL23Q16540 153 aaKnown RBP12.28□□□□□ -0.44
CIRBP-243ENST00000593128 LYPD5Q6UWN5 251 aa12.28□□□□□ -0.44
CIRBP-243ENST00000593128 LYPD1Q8N2G4 141 aa12.28□□□□□ -0.44
CIRBP-243ENST00000593128 SCRT2Q9NQ03 307 aa12.28□□□□□ -0.44
CIRBP-243ENST00000593128 TRGV11A0A075B6L2 103 aa12.27□□□□□ -0.45
CIRBP-243ENST00000593128 TRBV7-9A0A0J9YWB2 115 aa12.27□□□□□ -0.45
CIRBP-243ENST00000593128 PGPA6NDG6 321 aa12.27□□□□□ -0.45
CIRBP-243ENST00000593128 SRIP30626 198 aa12.27□□□□□ -0.45
CIRBP-243ENST00000593128 NEGR1Q7Z3B1 354 aa12.27□□□□□ -0.45
CIRBP-243ENST00000593128 ZNF479Q96JC4 524 aa12.27□□□□□ -0.45
CIRBP-243ENST00000593128 MBD2Q9UBB5 411 aa12.27□□□□□ -0.45
CIRBP-243ENST00000593128 EREGO14944 169 aa12.26□□□□□ -0.45
CIRBP-243ENST00000593128 HMGB3O15347 200 aaKnown RBP12.26□□□□□ -0.45
CIRBP-243ENST00000593128 GYPEP15421 78 aa12.26□□□□□ -0.45
CIRBP-243ENST00000593128 FAM74A1Q5RGS3 127 aa12.26□□□□□ -0.45
CIRBP-243ENST00000593128 GOLT1AQ6ZVE7 132 aa12.26□□□□□ -0.45
CIRBP-243ENST00000593128 MARVELD1Q9BSK0 173 aa12.26□□□□□ -0.45
CIRBP-243ENST00000593128 A0A1W2PPV4 95 aa12.25□□□□□ -0.45
CIRBP-243ENST00000593128 F6UZH7 168 aa12.25□□□□□ -0.45
CIRBP-243ENST00000593128 ERVFC1-1P60608 527 aa12.25□□□□□ -0.45
CIRBP-243ENST00000593128 ACOT6Q3I5F7 207 aaPredicted RBP12.25□□□□□ -0.45
CIRBP-243ENST00000593128 OTORQ9NRC9 128 aa12.25□□□□□ -0.45
CIRBP-243ENST00000593128 DNAH5Q8TE73 4624 aa12.25□□□□□ -0.45
CIRBP-243ENST00000593128 K7EQD1 137 aa12.24□□□□□ -0.45
CIRBP-243ENST00000593128 Q6AWC8 147 aa12.24□□□□□ -0.45
CIRBP-243ENST00000593128 Q6ZRN7 208 aaPredicted RBP12.24□□□□□ -0.45
CIRBP-243ENST00000593128 Q8N1X5 172 aa12.24□□□□□ -0.45
CIRBP-243ENST00000593128 SPXQ9BT56 116 aa12.24□□□□□ -0.45
CIRBP-243ENST00000593128 WFDC1Q9HC57 220 aa12.24□□□□□ -0.45
CIRBP-243ENST00000593128 LY96Q9Y6Y9 160 aa12.24□□□□□ -0.45
CIRBP-243ENST00000593128 TRAV9-2A0A087WT02 112 aa12.23□□□□□ -0.45
CIRBP-243ENST00000593128 GNRH2O43555 120 aa12.23□□□□□ -0.45
CIRBP-243ENST00000593128 RAB2AP61019 212 aa12.23□□□□□ -0.45
CIRBP-243ENST00000593128 GNG5P63218 68 aa12.23□□□□□ -0.45
CIRBP-243ENST00000593128 WFDC10BQ8IUB3 73 aa12.23□□□□□ -0.45
CIRBP-243ENST00000593128 OR4C5Q8NGB2 326 aa12.23□□□□□ -0.45
CIRBP-243ENST00000593128 OR10G4Q8NGN3 311 aa12.23□□□□□ -0.45
CIRBP-243ENST00000593128 LENEPQ9Y5L5 61 aa12.23□□□□□ -0.45
CIRBP-243ENST00000593128 TRAV8-1A0A0A6YYK1 113 aa12.22□□□□□ -0.45
CIRBP-243ENST00000593128 RASL10AQ92737 203 aa12.22□□□□□ -0.45
CIRBP-243ENST00000593128 SGK494Q96LW2 274 aa12.22□□□□□ -0.45
CIRBP-243ENST00000593128 TREM1Q9NP99 234 aa12.22□□□□□ -0.45
CIRBP-243ENST00000593128 TRAV21A0A0B4J279 112 aa12.21□□□□□ -0.45
CIRBP-243ENST00000593128 IGHV3-16A0A0C4DH30 117 aa12.21□□□□□ -0.45
CIRBP-243ENST00000593128 ORM1P02763 201 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms