RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 FBN2P35556 2912 aa11.98□□□□□ -0.49
MBD1-227ENST00000592060 CRXO43186 299 aaPredicted RBP11.98□□□□□ -0.49
MBD1-227ENST00000592060 OR5AL1P0C617 328 aa11.98□□□□□ -0.49
MBD1-227ENST00000592060 SSTP61278 116 aa11.98□□□□□ -0.49
MBD1-227ENST00000592060 LEPROTL1O95214 131 aa11.98□□□□□ -0.49
MBD1-227ENST00000592060 PSMB8P28062 276 aa11.98□□□□□ -0.49
MBD1-227ENST00000592060 TWIST1Q15672 202 aa11.98□□□□□ -0.49
MBD1-227ENST00000592060 ATOH7Q8N100 152 aa11.98□□□□□ -0.49
MBD1-227ENST00000592060 ZNF738Q8NE65 137 aa11.98□□□□□ -0.49
MBD1-227ENST00000592060 TMEM191AQ9H0A3 160 aa11.98□□□□□ -0.49
MBD1-227ENST00000592060 UTP20O75691 2785 aaKnown RBP11.97□□□□□ -0.49
MBD1-227ENST00000592060 UBR5O95071 2799 aaPredicted RBP11.97□□□□□ -0.49
MBD1-227ENST00000592060 IGHV7-4-1A0A0J9YVY3 117 aa11.97□□□□□ -0.49
MBD1-227ENST00000592060 RNF223E7ERA6 249 aa11.97□□□□□ -0.49
MBD1-227ENST00000592060 IGHV4-31P0DP07 118 aa11.97□□□□□ -0.49
MBD1-227ENST00000592060 ZNF705AQ6ZN79 300 aaPredicted RBP11.97□□□□□ -0.49
MBD1-227ENST00000592060 ORMDL3Q8N138 153 aa11.97□□□□□ -0.49
MBD1-227ENST00000592060 PRELID3AQ96N28 172 aa11.97□□□□□ -0.49
MBD1-227ENST00000592060 AP5S1Q9NUS5 200 aa11.97□□□□□ -0.49
MBD1-227ENST00000592060 LENEPQ9Y5L5 61 aa11.97□□□□□ -0.49
MBD1-227ENST00000592060 SYS1-DBNDD2H3BUS1 97 aa11.96□□□□□ -0.49
MBD1-227ENST00000592060 MRPL52Q86TS9 123 aaKnown RBP11.96□□□□□ -0.49
MBD1-227ENST00000592060 RNF185Q96GF1 192 aa11.96□□□□□ -0.49
MBD1-227ENST00000592060 CELSR2Q9HCU4 2923 aa11.96□□□□□ -0.49
MBD1-227ENST00000592060 MSRB1Q9NZV6 116 aa11.96□□□□□ -0.49
MBD1-227ENST00000592060 A0A1B0GV90 55 aa11.96□□□□□ -0.5
MBD1-227ENST00000592060 FOXE3Q13461 319 aa11.96□□□□□ -0.5
MBD1-227ENST00000592060 MAJINQ3KP22 176 aa11.96□□□□□ -0.5
MBD1-227ENST00000592060 PRR9Q5T870 116 aa11.96□□□□□ -0.5
MBD1-227ENST00000592060 FA2HQ7L5A8 372 aa11.96□□□□□ -0.5
MBD1-227ENST00000592060 BEX4Q9NWD9 120 aaPredicted RBP11.96□□□□□ -0.5
MBD1-227ENST00000592060 SIGLEC8Q9NYZ4 499 aa11.96□□□□□ -0.5
MBD1-227ENST00000592060 PEF1Q9UBV8 284 aaKnown RBP11.96□□□□□ -0.5
MBD1-227ENST00000592060 M0R143 59 aa11.95□□□□□ -0.5
MBD1-227ENST00000592060 IGLC3P0DOY3 106 aa11.95□□□□□ -0.5
MBD1-227ENST00000592060 IFI27P40305 119 aaPredicted RBP11.95□□□□□ -0.5
MBD1-227ENST00000592060 TM4SF20Q53R12 229 aa11.95□□□□□ -0.5
MBD1-227ENST00000592060 RHPN1-AS1Q9BWJ2 59 aa11.95□□□□□ -0.5
MBD1-227ENST00000592060 DAZ1Q9NQZ3 744 aaKnown RBP11.95□□□□□ -0.5
MBD1-227ENST00000592060 ANKRD17O75179 2603 aaKnown RBP11.94□□□□□ -0.5
MBD1-227ENST00000592060 TRAV9-2A0A087WT02 112 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 TMEM89A2RUT3 159 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 J3QKU1 62 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 OVOL1O14753 267 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 Q6ZQT7 251 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 PRSS3P2Q8NHM4 247 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 CRYBG3Q68DQ2 2970 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 K7EMT4 169 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 DEFB113Q30KQ7 82 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 FAM106AQ4KMX7 169 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 C10orf99Q6UWK7 81 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 LINC00477Q96M19 166 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 SMPXQ9UHP9 88 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 HSPB8Q9UJY1 196 aa11.94□□□□□ -0.5
MBD1-227ENST00000592060 A0A096LNJ9 63 aa11.93□□□□□ -0.5
MBD1-227ENST00000592060 C20orf202A1L168 122 aa11.93□□□□□ -0.5
MBD1-227ENST00000592060 SMKR1H3BMG3 65 aa11.93□□□□□ -0.5
MBD1-227ENST00000592060 NPYP01303 97 aa11.93□□□□□ -0.5
MBD1-227ENST00000592060 EDN2P20800 178 aa11.93□□□□□ -0.5
MBD1-227ENST00000592060 LRRC75A-AS1Q8N1F1 130 aa11.93□□□□□ -0.5
MBD1-227ENST00000592060 ZFAND2AQ8N6M9 145 aa11.93□□□□□ -0.5
MBD1-227ENST00000592060 UQCR10Q9UDW1 63 aa11.93□□□□□ -0.5
MBD1-227ENST00000592060 VPREB3Q9UKI3 123 aa11.93□□□□□ -0.5
MBD1-227ENST00000592060 NCR2O95944 276 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 CKS2P33552 79 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 PET117Q6UWS5 81 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 Q6YL49 198 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 KLHDC1Q8N7A1 406 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 OR10J6PQ8NGY7 276 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 OR10AG1Q8NH19 301 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 FAM19A4Q96LR4 140 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 CSPG4Q6UVK1 2322 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 LOC389332A0A1B0GUA5 103 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 OR4C46A6NHA9 309 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 DEFB1P60022 68 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 Q5PR19 223 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 MAP1LC3CQ9BXW4 147 aa11.92□□□□□ -0.5
MBD1-227ENST00000592060 PRRC2AP48634 2157 aaKnown RBP11.91□□□□□ -0.5
MBD1-227ENST00000592060 SNAI2O43623 268 aa11.91□□□□□ -0.5
MBD1-227ENST00000592060 ZNF747Q9BV97 191 aa11.91□□□□□ -0.5
MBD1-227ENST00000592060 IGLL1P15814 213 aa11.9□□□□□ -0.5
MBD1-227ENST00000592060 PRSS57Q6UWY2 283 aa11.9□□□□□ -0.5
MBD1-227ENST00000592060 ZNF702PQ9H963 129 aa11.9□□□□□ -0.5
MBD1-227ENST00000592060 IGHV4-4A0A075B6R2 117 aa11.9□□□□□ -0.5
MBD1-227ENST00000592060 PPBPP02775 128 aa11.9□□□□□ -0.5
MBD1-227ENST00000592060 RPL11P62913 178 aaKnown RBP11.9□□□□□ -0.5
MBD1-227ENST00000592060 KRTAP1-3Q8IUG1 177 aa11.9□□□□□ -0.5
MBD1-227ENST00000592060 APRG1Q8IVJ8 170 aa11.9□□□□□ -0.5
MBD1-227ENST00000592060 OR8A1Q8NGG7 326 aa11.9□□□□□ -0.5
MBD1-227ENST00000592060 MYOZ3Q8TDC0 251 aa11.9□□□□□ -0.5
MBD1-227ENST00000592060 GAS8-AS1O95177 125 aa11.89□□□□□ -0.51
MBD1-227ENST00000592060 LINC01545Q5VT33 79 aa11.89□□□□□ -0.51
MBD1-227ENST00000592060 LAMTOR2Q9Y2Q5 125 aa11.89□□□□□ -0.51
MBD1-227ENST00000592060 UFC1Q9Y3C8 167 aa11.89□□□□□ -0.51
MBD1-227ENST00000592060 CSMD2Q7Z408 3487 aa11.89□□□□□ -0.51
MBD1-227ENST00000592060 IGKV3-7A0A075B6H7 116 aa11.88□□□□□ -0.51
MBD1-227ENST00000592060 LINC01546A6NGU7 62 aa11.88□□□□□ -0.51
MBD1-227ENST00000592060 F6UB75 175 aa11.88□□□□□ -0.51
MBD1-227ENST00000592060 TCF21O43680 179 aa11.88□□□□□ -0.51
MBD1-227ENST00000592060 RPLP1P05386 114 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms