RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 SMAD5-AS1Q9Y6J3 95 aa8.49□□□□□ -1.05
LINC01140-210ENST00000590653 ATRXP46100 2492 aa8.49□□□□□ -1.05
LINC01140-210ENST00000590653 IGLC6P0CF74 106 aa8.49□□□□□ -1.05
LINC01140-210ENST00000590653 C12orf74Q32Q52 190 aa8.49□□□□□ -1.05
LINC01140-210ENST00000590653 LINC01560Q8TB33 94 aa8.49□□□□□ -1.05
LINC01140-210ENST00000590653 RAB1BQ9H0U4 201 aa8.49□□□□□ -1.05
LINC01140-210ENST00000590653 KAAG1Q9UBP8 84 aa8.49□□□□□ -1.05
LINC01140-210ENST00000590653 A0A1B0GWB2 263 aa8.48□□□□□ -1.05
LINC01140-210ENST00000590653 PDE6HQ13956 83 aa8.48□□□□□ -1.05
LINC01140-210ENST00000590653 Q6ZS92 163 aa8.48□□□□□ -1.05
LINC01140-210ENST00000590653 TTC9CQ8N5M4 171 aa8.48□□□□□ -1.05
LINC01140-210ENST00000590653 SPAG8Q99932 426 aaPredicted RBP8.48□□□□□ -1.05
LINC01140-210ENST00000590653 HIF1ANQ9NWT6 349 aa8.48□□□□□ -1.05
LINC01140-210ENST00000590653 DPM3Q9P2X0 92 aa8.48□□□□□ -1.05
LINC01140-210ENST00000590653 CD300EQ496F6 205 aaPredicted RBP8.47□□□□□ -1.05
LINC01140-210ENST00000590653 SPANXN1Q5VSR9 72 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 FOXI2Q6ZQN5 318 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 PHLDA1Q8WV24 401 aaPredicted RBP8.47□□□□□ -1.05
LINC01140-210ENST00000590653 TNFRSF14Q92956 283 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 J3QR89 54 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 IGHG4P01861 327 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 ECSCRQ19T08 205 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 ZNF575Q86XF7 245 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 SPANXB1Q9NS25 103 aaPredicted RBP8.47□□□□□ -1.05
LINC01140-210ENST00000590653 SHISA9B4DS77 424 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 F8W735 103 aaPredicted RBP8.47□□□□□ -1.05
LINC01140-210ENST00000590653 TGFAP01135 160 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 C5orf64Q2M2E5 130 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 GAGE13Q4V321 117 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 C11orf21Q9P2W6 132 aa8.47□□□□□ -1.05
LINC01140-210ENST00000590653 CTSGP08311 255 aa8.46□□□□□ -1.05
LINC01140-210ENST00000590653 IGKV3D-20A0A0C4DH25 116 aa8.46□□□□□ -1.06
LINC01140-210ENST00000590653 LOC107984156A0A0G2JMH3 177 aa8.46□□□□□ -1.06
LINC01140-210ENST00000590653 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.46□□□□□ -1.06
LINC01140-210ENST00000590653 ATP5LO75964 103 aa8.46□□□□□ -1.06
LINC01140-210ENST00000590653 ARL17AQ8IVW1 177 aa8.46□□□□□ -1.06
LINC01140-210ENST00000590653 IGLV11-55A0A075B6I3 123 aa8.46□□□□□ -1.06
LINC01140-210ENST00000590653 E9PLD3 99 aa8.46□□□□□ -1.06
LINC01140-210ENST00000590653 LAGE3Q14657 143 aa8.46□□□□□ -1.06
LINC01140-210ENST00000590653 PRR30Q53SZ7 412 aaPredicted RBP8.46□□□□□ -1.06
LINC01140-210ENST00000590653 Q8N8P6 123 aa8.46□□□□□ -1.06
LINC01140-210ENST00000590653 HIGD1BQ9P298 99 aa8.46□□□□□ -1.06
LINC01140-210ENST00000590653 H3BVH4 76 aa8.45□□□□□ -1.06
LINC01140-210ENST00000590653 M0R381 172 aa8.45□□□□□ -1.06
LINC01140-210ENST00000590653 CLEC3BP05452 202 aa8.45□□□□□ -1.06
LINC01140-210ENST00000590653 EMP1P54849 157 aa8.45□□□□□ -1.06
LINC01140-210ENST00000590653 ZNF418Q8TF45 676 aaPredicted RBP8.45□□□□□ -1.06
LINC01140-210ENST00000590653 CLUHP3Q96NS8 147 aa8.45□□□□□ -1.06
LINC01140-210ENST00000590653 CREBBPQ92793 2442 aa8.45□□□□□ -1.06
LINC01140-210ENST00000590653 VKORC1Q9BQB6 163 aa8.45□□□□□ -1.06
LINC01140-210ENST00000590653 AGPAT4-IT1Q9H0P7 198 aa8.45□□□□□ -1.06
LINC01140-210ENST00000590653 ZMAT4Q9H898 229 aa8.45□□□□□ -1.06
LINC01140-210ENST00000590653 OR11H12B2RN74 326 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 CCDC144NLQ6NUI1 221 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 SCGB1D4Q6XE38 83 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 OR11H1Q8NG94 326 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 OR11H2Q8NH07 326 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 C20orf78Q9BR46 151 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 TM2D2Q9BX73 214 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 F8W1H4 67 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 CD3EP07766 207 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
LINC01140-210ENST00000590653 IGKV3-7A0A075B6H7 116 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 LY6LH3BQJ8 138 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 APOMO95445 188 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 DEFB1P60022 68 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 SRSF9Q13242 221 aaKnown RBP eCLIP8.44□□□□□ -1.06
LINC01140-210ENST00000590653 C15orf32Q32M92 178 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 MRPL16Q9NX20 251 aaKnown RBP8.44□□□□□ -1.06
LINC01140-210ENST00000590653 PGPEP1Q9NXJ5 209 aa8.44□□□□□ -1.06
LINC01140-210ENST00000590653 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC01140-210ENST00000590653 FAM90A27PA6NNH2 459 aa8.43□□□□□ -1.06
LINC01140-210ENST00000590653 ZNF672Q499Z4 452 aaPredicted RBP8.43□□□□□ -1.06
LINC01140-210ENST00000590653 CLEC19AQ6UXS0 136 aa8.43□□□□□ -1.06
LINC01140-210ENST00000590653 ZNF502Q8TBZ5 544 aa8.43□□□□□ -1.06
LINC01140-210ENST00000590653 SCGB3A1Q96QR1 104 aa8.43□□□□□ -1.06
LINC01140-210ENST00000590653 TMEM78Q5T7P6 136 aa8.43□□□□□ -1.06
LINC01140-210ENST00000590653 PTH2Q96A98 100 aa8.43□□□□□ -1.06
LINC01140-210ENST00000590653 SORL1Q92673 2214 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 A0A087WX48 190 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 NDUFS8O00217 210 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 IGF1P05019 195 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 MGPP08493 103 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 GRNP28799 593 aaKnown RBP8.42□□□□□ -1.06
LINC01140-210ENST00000590653 PSMB2P49721 201 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 RAB9AP51151 201 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 RRN3P1Q2M238 152 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 SMPXQ9UHP9 88 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 CEACAM3P40198 252 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 CKS1BP61024 79 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 IGFL3Q6UXB1 125 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 RNF5Q99942 180 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 A0A1B0GV72 72 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 B9A039 149 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 HOXA3O43365 443 aaPredicted RBP8.42□□□□□ -1.06
LINC01140-210ENST00000590653 HLA-DRB4P13762 266 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 SRSF1Q07955 248 aaKnown RBP eCLIP8.42□□□□□ -1.06
LINC01140-210ENST00000590653 KLHL30-AS1Q8NEE0 82 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 ATP6V0BQ99437 205 aa8.42□□□□□ -1.06
LINC01140-210ENST00000590653 HLA-DRB4X5D2U9 266 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms