RNA–Protein interactions for RNA: ENST00000589883.1

PTBP1-215, Transcript of polypyrimidine tract binding protein 1, human

TSL 3

Gene PTBP1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP1-215	ENST00000589883	FRAS1	Q86XX4	4008 aa		13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	TRAV12-3	A0A0B4J271	114 aa		13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	C11orf94	C9JXX5	98 aa		13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	DEFB4A	O15263	64 aa		13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	GPX1	P07203	203 aa		13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	CRISP2	P16562	243 aa		13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	RNASE4	P34096	147 aa	Known RBP	13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	ZNF680	Q8NEM1	530 aa		13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	PCNP	Q8WW12	178 aa	Known RBP	13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	HIST1H2BA	Q96A08	127 aa		13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	LINC01587	Q99440	93 aa		13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	PSG8	Q9UQ74	426 aa		13.95	□□□□□ -0.18
PTBP1-215	ENST00000589883	IGHV4-28	A0A0C4DH34	117 aa		13.94	□□□□□ -0.18
PTBP1-215	ENST00000589883	C7orf71	A4D174	169 aa		13.94	□□□□□ -0.18
PTBP1-215	ENST00000589883	KLLN	B2CW77	178 aa		13.94	□□□□□ -0.18
PTBP1-215	ENST00000589883	IFNA1	P01562	189 aa		13.94	□□□□□ -0.18
PTBP1-215	ENST00000589883	PRM2	P04554	102 aa		13.94	□□□□□ -0.18
PTBP1-215	ENST00000589883	FLI1	Q01543	452 aa	Predicted RBP	13.94	□□□□□ -0.18
PTBP1-215	ENST00000589883	PRNT	Q86SH4	94 aa		13.94	□□□□□ -0.18
PTBP1-215	ENST00000589883	TVP23C	Q96ET8	276 aa		13.94	□□□□□ -0.18
PTBP1-215	ENST00000589883	SCO2	A0A1W2PP80	73 aa		13.93	□□□□□ -0.18
PTBP1-215	ENST00000589883		F6UZH7	168 aa		13.93	□□□□□ -0.18
PTBP1-215	ENST00000589883	IGLV2-11	P01706	119 aa		13.93	□□□□□ -0.18
PTBP1-215	ENST00000589883	MIF	P14174	115 aa		13.93	□□□□□ -0.18
PTBP1-215	ENST00000589883	TMEM75	Q8N9X5	138 aa		13.93	□□□□□ -0.18
PTBP1-215	ENST00000589883		Q8NAQ8	132 aa		13.93	□□□□□ -0.18
PTBP1-215	ENST00000589883	TRBV7-9	A0A0J9YWB2	115 aa		13.92	□□□□□ -0.18
PTBP1-215	ENST00000589883	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.92	□□□□□ -0.18
PTBP1-215	ENST00000589883	NMB	P08949	121 aa		13.92	□□□□□ -0.18
PTBP1-215	ENST00000589883	HTN1	P15515	57 aa		13.92	□□□□□ -0.18
PTBP1-215	ENST00000589883	AKR1C3	P42330	323 aa		13.92	□□□□□ -0.18
PTBP1-215	ENST00000589883	TCEAL7	Q9BRU2	100 aa		13.92	□□□□□ -0.18
PTBP1-215	ENST00000589883	NIPSNAP3B	Q9BS92	247 aa		13.92	□□□□□ -0.18
PTBP1-215	ENST00000589883	NDFIP1	Q9BT67	221 aa		13.92	□□□□□ -0.18
PTBP1-215	ENST00000589883	TREM1	Q9NP99	234 aa		13.92	□□□□□ -0.18
PTBP1-215	ENST00000589883	LENEP	Q9Y5L5	61 aa		13.92	□□□□□ -0.18
PTBP1-215	ENST00000589883	BCL2	P10415	239 aa		13.91	□□□□□ -0.18
PTBP1-215	ENST00000589883	RRN3P1	Q2M238	152 aa		13.91	□□□□□ -0.18
PTBP1-215	ENST00000589883		Q6ZQT7	251 aa		13.91	□□□□□ -0.18
PTBP1-215	ENST00000589883	TMEM256	Q8N2U0	113 aa		13.91	□□□□□ -0.18
PTBP1-215	ENST00000589883	C8orf49	Q96NF6	230 aa		13.91	□□□□□ -0.18
PTBP1-215	ENST00000589883	NEU1	Q99519	415 aa		13.91	□□□□□ -0.18
PTBP1-215	ENST00000589883	C20orf144	Q9BQM9	153 aa		13.91	□□□□□ -0.18
PTBP1-215	ENST00000589883		H7BYZ3	331 aa		13.9	□□□□□ -0.18
PTBP1-215	ENST00000589883	LYPD6B	Q8NI32	183 aa		13.9	□□□□□ -0.18
PTBP1-215	ENST00000589883	LOC102723971	A0A1B0GUV8	181 aa		13.89	□□□□□ -0.19
PTBP1-215	ENST00000589883	SMIM9	A6NGZ8	99 aa		13.89	□□□□□ -0.19
PTBP1-215	ENST00000589883	FBLL1	A6NHQ2	334 aa	Known RBP	13.89	□□□□□ -0.19
PTBP1-215	ENST00000589883	IGLL5	B9A064	214 aa		13.89	□□□□□ -0.19
PTBP1-215	ENST00000589883	EMP1	P54849	157 aa		13.89	□□□□□ -0.19
PTBP1-215	ENST00000589883	TAS2R60	P59551	318 aa		13.89	□□□□□ -0.19
PTBP1-215	ENST00000589883	UBE2G1	P62253	170 aa		13.89	□□□□□ -0.19
PTBP1-215	ENST00000589883	MEF2B	Q02080	365 aa	Predicted RBP	13.89	□□□□□ -0.19
PTBP1-215	ENST00000589883		Q86TA4	180 aa		13.89	□□□□□ -0.19
PTBP1-215	ENST00000589883	VAX2	Q9UIW0	290 aa		13.89	□□□□□ -0.19
PTBP1-215	ENST00000589883	ZNF324	O75467	553 aa	Predicted RBP	13.88	□□□□□ -0.19
PTBP1-215	ENST00000589883	AZU1	P20160	251 aa		13.88	□□□□□ -0.19
PTBP1-215	ENST00000589883	FMC1	Q96HJ9	113 aa		13.88	□□□□□ -0.19
PTBP1-215	ENST00000589883	TXNDC17	Q9BRA2	123 aa		13.88	□□□□□ -0.19
PTBP1-215	ENST00000589883	TMEM183B	Q1AE95	376 aa		13.87	□□□□□ -0.19
PTBP1-215	ENST00000589883	SAPCD1	Q5SSQ6	148 aa		13.87	□□□□□ -0.19
PTBP1-215	ENST00000589883	KLF12	Q9Y4X4	402 aa		13.87	□□□□□ -0.19
PTBP1-215	ENST00000589883	TRAV10	A0A0B4J240	114 aa		13.86	□□□□□ -0.19
PTBP1-215	ENST00000589883	RBFOX3	A6NFN3	312 aa		13.86	□□□□□ -0.19
PTBP1-215	ENST00000589883	TAGLN2	P37802	199 aa	Known RBP	13.86	□□□□□ -0.19
PTBP1-215	ENST00000589883	C11orf52	Q96A22	123 aa		13.86	□□□□□ -0.19
PTBP1-215	ENST00000589883	PYGO2	Q9BRQ0	406 aa		13.86	□□□□□ -0.19
PTBP1-215	ENST00000589883	APLN	Q9ULZ1	77 aa		13.86	□□□□□ -0.19
PTBP1-215	ENST00000589883	DNAH10	Q8IVF4	4471 aa		13.86	□□□□□ -0.19
PTBP1-215	ENST00000589883	RGS13	O14921	159 aa		13.85	□□□□□ -0.19
PTBP1-215	ENST00000589883	PDE6D	O43924	150 aa		13.85	□□□□□ -0.19
PTBP1-215	ENST00000589883	GCG	P01275	180 aa		13.85	□□□□□ -0.19
PTBP1-215	ENST00000589883	ZNF80	P51504	273 aa	Predicted RBP	13.85	□□□□□ -0.19
PTBP1-215	ENST00000589883	SMUG1	Q53HV7	270 aa		13.85	□□□□□ -0.19
PTBP1-215	ENST00000589883	TOR2A	Q5JU69	321 aa		13.85	□□□□□ -0.19
PTBP1-215	ENST00000589883	MUC21	Q5SSG8	566 aa		13.85	□□□□□ -0.19
PTBP1-215	ENST00000589883		Q6AWC8	147 aa		13.85	□□□□□ -0.19
PTBP1-215	ENST00000589883	DERL1	Q9BUN8	251 aa		13.85	□□□□□ -0.19
PTBP1-215	ENST00000589883	NAGK	Q9UJ70	344 aa		13.85	□□□□□ -0.19
PTBP1-215	ENST00000589883	MED9	Q9NWA0	146 aa		13.84	□□□□□ -0.19
PTBP1-215	ENST00000589883	IGHV1OR15-1	A0A075B7D0	117 aa		13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	TRAV21	A0A0B4J279	112 aa		13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	TRBV6-1	A0A0K0K1D8	114 aa		13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	TMEM189	A5PLL7	270 aa		13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	CBY3	A6NI87	242 aa		13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	LTA	P01374	205 aa		13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	S100A9	P06702	114 aa	Known RBP	13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	RPL35	P42766	123 aa	Known RBP	13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	ZNF506	Q5JVG8	444 aa		13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	NHLRC2	Q8NBF2	726 aa		13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	C16orf74	Q96GX8	76 aa		13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	EIF5A2	Q9GZV4	153 aa	Known RBP	13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	CELA1	Q9UNI1	258 aa		13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	ZFP30	Q9Y2G7	519 aa		13.83	□□□□□ -0.2
PTBP1-215	ENST00000589883	IFITM2	Q01629	132 aa		13.82	□□□□□ -0.2
PTBP1-215	ENST00000589883	BAGE2	Q86Y30	109 aa		13.82	□□□□□ -0.2
PTBP1-215	ENST00000589883	EIF4E3	Q8N5X7	224 aa	Known RBP	13.82	□□□□□ -0.2
PTBP1-215	ENST00000589883	RNASE8	Q8TDE3	154 aa	Known RBP	13.82	□□□□□ -0.2
PTBP1-215	ENST00000589883	TMEM263	Q8WUH6	116 aa	Known RBP	13.82	□□□□□ -0.2
PTBP1-215	ENST00000589883	ZC2HC1A	Q96GY0	325 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms