RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TSPOP30536 169 aa7.46□□□□□ -1.22
SDF2-208ENST00000589788 RRN3P1Q2M238 152 aa7.46□□□□□ -1.22
SDF2-208ENST00000589788 C1orf158Q8N1D5 194 aa7.46□□□□□ -1.22
SDF2-208ENST00000589788 MANBALQ9NQG1 85 aa7.46□□□□□ -1.22
SDF2-208ENST00000589788 ARL2-SNX15V9GYD0 113 aa7.46□□□□□ -1.22
SDF2-208ENST00000589788 LOC102723971A0A1B0GUV8 181 aa7.45□□□□□ -1.22
SDF2-208ENST00000589788 A0A1W2PRE2 83 aa7.45□□□□□ -1.22
SDF2-208ENST00000589788 LINC00862A6NCI5 91 aa7.45□□□□□ -1.22
SDF2-208ENST00000589788 C11orf94C9JXX5 98 aa7.45□□□□□ -1.22
SDF2-208ENST00000589788 SPART-AS1P0CW21 52 aa7.45□□□□□ -1.22
SDF2-208ENST00000589788 TAGLN2P37802 199 aaKnown RBP7.45□□□□□ -1.22
SDF2-208ENST00000589788 CDKN1BP46527 198 aa7.45□□□□□ -1.22
SDF2-208ENST00000589788 ICAM4Q14773 271 aa7.45□□□□□ -1.22
SDF2-208ENST00000589788 TMEM256Q8N2U0 113 aa7.45□□□□□ -1.22
SDF2-208ENST00000589788 EXOC3-AS1Q8N2X6 119 aa7.45□□□□□ -1.22
SDF2-208ENST00000589788 FAM210AQ96ND0 272 aa7.45□□□□□ -1.22
SDF2-208ENST00000589788 GNG13Q9P2W3 67 aa7.45□□□□□ -1.22
SDF2-208ENST00000589788 M0R3E3 92 aa7.44□□□□□ -1.22
SDF2-208ENST00000589788 CRXO43186 299 aaPredicted RBP7.44□□□□□ -1.22
SDF2-208ENST00000589788 BCL2P10415 239 aa7.44□□□□□ -1.22
SDF2-208ENST00000589788 LEPP41159 167 aa7.44□□□□□ -1.22
SDF2-208ENST00000589788 LINC01587Q99440 93 aa7.44□□□□□ -1.22
SDF2-208ENST00000589788 CELA1Q9UNI1 258 aa7.44□□□□□ -1.22
SDF2-208ENST00000589788 TRAV10A0A0B4J240 114 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 TEX48A0A1B0GUV7 120 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 RAB19A4D1S5 217 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 RBFOX3A6NFN3 312 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 FAM74A7A6NL05 159 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 ZNF705GA8MUZ8 300 aaPredicted RBP7.43□□□□□ -1.22
SDF2-208ENST00000589788 PAGE4O60829 102 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 CSN1S1P47710 185 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 UBE2G2P60604 165 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 RANP62826 216 aaKnown RBP7.43□□□□□ -1.22
SDF2-208ENST00000589788 MEF2BQ02080 365 aaPredicted RBP7.43□□□□□ -1.22
SDF2-208ENST00000589788 ZNF506Q5JVG8 444 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 LCE3BQ5TA77 95 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 Q6ZTC4 211 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 LYPD1Q8N2G4 141 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 C2CD4CQ8TF44 421 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 ODF3Q96PU9 254 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 C20orf144Q9BQM9 153 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 TXNDC17Q9BRA2 123 aa7.43□□□□□ -1.22
SDF2-208ENST00000589788 NKX6-2Q9C056 277 aaPredicted RBP7.43□□□□□ -1.22
SDF2-208ENST00000589788 YTHDF2Q9Y5A9 579 aaKnown RBP7.43□□□□□ -1.22
SDF2-208ENST00000589788 J3KRW8 73 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 NDUFS6O75380 124 aaKnown RBP7.42□□□□□ -1.22
SDF2-208ENST00000589788 CT45A10P0DMU9 189 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 HTN1P15515 57 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 NDUFA5Q16718 116 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 C12orf74Q32Q52 190 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 TMEM78Q5T7P6 136 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 FAM222AQ5U5X8 452 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 COMMD7Q86VX2 200 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 LINC00477Q96M19 166 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 Q9H3A6 140 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 SMDT1Q9H4I9 107 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 OTORQ9NRC9 128 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 VAX2Q9UIW0 290 aa7.42□□□□□ -1.22
SDF2-208ENST00000589788 IGKV2-40A0A087WW87 121 aaPredicted RBP7.41□□□□□ -1.22
SDF2-208ENST00000589788 DEFB131BA0A096LNP1 70 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 GGTLC3B5MD39 225 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 IGLL5B9A064 214 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 H7BYZ3 331 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 LY6G6CO95867 125 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 IGKV2D-40P01614 121 aaPredicted RBP7.41□□□□□ -1.22
SDF2-208ENST00000589788 PRM2P04554 102 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 ATP5G3P48201 142 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 TAS2R60P59551 318 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 ERCC8Q13216 396 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 KRTAP19-4Q3LI73 84 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 GFI1BQ5VTD9 330 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 CST9LP1Q5W188 147 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 CCDC28AQ8IWP9 274 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 EIF4E3Q8N5X7 224 aaKnown RBP7.41□□□□□ -1.22
SDF2-208ENST00000589788 TCEAL7Q9BRU2 100 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 NIPSNAP3BQ9BS92 247 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 EIF5A2Q9GZV4 153 aaKnown RBP7.41□□□□□ -1.22
SDF2-208ENST00000589788 AGPAT4-IT1Q9H0P7 198 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 DKK2Q9UBU2 259 aa7.41□□□□□ -1.22
SDF2-208ENST00000589788 TRAV12-3A0A0B4J271 114 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 TCTAP57738 103 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 DAD1P61803 113 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 PEA15Q15121 130 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 UQCC3Q6UW78 93 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 C9orf47Q6ZRZ4 202 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 ARL6IP6Q8N6S5 226 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 C5orf17Q8NAS9 161 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 CMTM2Q8TAZ6 248 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 RXFP4Q8TDU9 374 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 LINC00476Q8WZB0 136 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 C16orf74Q96GX8 76 aa7.4□□□□□ -1.22
SDF2-208ENST00000589788 C7orf71A4D174 169 aa7.39□□□□□ -1.23
SDF2-208ENST00000589788 PGPA6NDG6 321 aa7.39□□□□□ -1.23
SDF2-208ENST00000589788 LYRM9A8MSI8 78 aa7.39□□□□□ -1.23
SDF2-208ENST00000589788 F6UZH7 168 aa7.39□□□□□ -1.23
SDF2-208ENST00000589788 PDE6DO43924 150 aa7.39□□□□□ -1.23
SDF2-208ENST00000589788 SLC25A5P05141 298 aaKnown RBP7.39□□□□□ -1.23
SDF2-208ENST00000589788 GPX1P07203 203 aa7.39□□□□□ -1.23
SDF2-208ENST00000589788 HTN3P15516 51 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms