RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 ARL3P36405 182 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 UQCRFS1P47985 274 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 IGFL4Q6B9Z1 124 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 C9orf139Q6ZV77 190 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 TMEM219Q86XT9 240 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 SIGLEC8Q9NYZ4 499 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 CLPSL1A2RUU4 121 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 TMEM8BA6NDV4 472 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 C19orf84I3L1E1 186 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 NDUFA4O00483 81 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 HINT1P49773 126 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-206ENST00000589117 ZNF80P51504 273 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-206ENST00000589117 ATP5J2P56134 94 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 DSCR9P59020 149 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 ERCC8Q13216 396 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 CD300EQ496F6 205 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-206ENST00000589117 C9orf47Q6ZRZ4 202 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 Q71RC1 249 aaPredicted RBP5.69□□□□□ -1.5
ZNF540-206ENST00000589117 C10orf105Q8TEF2 133 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 DPF1Q92782 380 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 LINC00477Q96M19 166 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 COL6A6A6NMZ7 2263 aa5.69□□□□□ -1.5
ZNF540-206ENST00000589117 TRAV40A0A0B4J280 105 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 IGHV3-66A0A0C4DH42 116 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 LINC01548A6NM66 108 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 GATA3P23771 443 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 HLA-DMBP28068 263 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 ZNF124Q15973 351 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 LINC00173Q6ZV60 143 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 RNF182Q8N6D2 247 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 ZNF738Q8NE65 137 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 OR10J6PQ8NGY7 276 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 ORAOV1Q8WV07 137 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 NPFFR1Q9GZQ6 430 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 AGPAT4-IT1Q9H0P7 198 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 WNK2Q9Y3S1 2297 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 SPTBN1Q01082 2364 aaKnown RBP5.68□□□□□ -1.5
ZNF540-206ENST00000589117 hDV102S1A0JD36 115 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 OVOL1O14753 267 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 PRB4P10163 310 aaPredicted RBP5.68□□□□□ -1.5
ZNF540-206ENST00000589117 CACNG7P62955 275 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 LGALS9BQ3B8N2 356 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 LGALS9CQ6DKI2 356 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 IL17RELQ6ZVW7 336 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 STPG4Q8N801 248 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 OR8A1Q8NGG7 326 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 OR1N2Q8NGR9 330 aa5.68□□□□□ -1.5
ZNF540-206ENST00000589117 IGHV4-61A0A0C4DH41 118 aa5.67□□□□□ -1.5
ZNF540-206ENST00000589117 MUC21A0A0G2JKD1 596 aa5.67□□□□□ -1.5
ZNF540-206ENST00000589117 MUC21A0A140T8X8 626 aa5.67□□□□□ -1.5
ZNF540-206ENST00000589117 IGHG2P01859 326 aa5.67□□□□□ -1.5
ZNF540-206ENST00000589117 MSMBP08118 114 aa5.67□□□□□ -1.5
ZNF540-206ENST00000589117 GCSHP23434 173 aa5.67□□□□□ -1.5
ZNF540-206ENST00000589117 MUC21Q5SSG8 566 aa5.67□□□□□ -1.5
ZNF540-206ENST00000589117 SAMD13Q5VXD3 122 aa5.67□□□□□ -1.5
ZNF540-206ENST00000589117 BRD3OSQ6XYD6 125 aa5.67□□□□□ -1.5
ZNF540-206ENST00000589117 RELNP78509 3460 aa5.67□□□□□ -1.5
ZNF540-206ENST00000589117 DCHS2Q6V1P9 2916 aa5.67□□□□□ -1.5
ZNF540-206ENST00000589117 IGHV3OR16-13A0A075B7E8 117 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 IGHV3OR16-10A0A075B7F0 116 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 IGHV3-74A0A0B4J1X5 117 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 B4DSR2 109 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 PRAC2D3DTV9 90 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 ZNF207O43670 478 aaKnown RBP5.66□□□□□ -1.5
ZNF540-206ENST00000589117 TFPI2P48307 235 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 SPANXN1Q5VSR9 72 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 IFI27L1Q96BM0 104 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 SCRT2Q9NQ03 307 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 ATRXP46100 2492 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 IGHV3-49A0A0A0MS15 119 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 COX8AP10176 69 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 PRSS57Q6UWY2 283 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 PIFOQ8TCI5 191 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 GLMPQ8WWB7 406 aa5.66□□□□□ -1.5
ZNF540-206ENST00000589117 HRNRQ86YZ3 2850 aaPredicted RBP5.66□□□□□ -1.5
ZNF540-206ENST00000589117 TRAV8-2A0A0B4J237 113 aa5.65□□□□□ -1.5
ZNF540-206ENST00000589117 TRAV21A0A0B4J279 112 aa5.65□□□□□ -1.5
ZNF540-206ENST00000589117 H3BUX3 64 aa5.65□□□□□ -1.5
ZNF540-206ENST00000589117 NUDT3O95989 172 aa5.65□□□□□ -1.5
ZNF540-206ENST00000589117 NPYP01303 97 aa5.65□□□□□ -1.5
ZNF540-206ENST00000589117 FCER1GP30273 86 aa5.65□□□□□ -1.5
ZNF540-206ENST00000589117 FAM106AQ4KMX7 169 aa5.65□□□□□ -1.5
ZNF540-206ENST00000589117 COX11Q9Y6N1 276 aa5.65□□□□□ -1.5
ZNF540-206ENST00000589117 HIVEP3Q5T1R4 2406 aa5.65□□□□□ -1.5
ZNF540-206ENST00000589117 IGHV4-4A0A075B6R2 117 aa5.65□□□□□ -1.51
ZNF540-206ENST00000589117 TRBV7-9A0A0J9YWB2 115 aa5.65□□□□□ -1.51
ZNF540-206ENST00000589117 A6NDX4 124 aa5.65□□□□□ -1.51
ZNF540-206ENST00000589117 LINC01546A6NGU7 62 aa5.65□□□□□ -1.51
ZNF540-206ENST00000589117 ELANEP08246 267 aa5.65□□□□□ -1.51
ZNF540-206ENST00000589117 S100A4P26447 101 aaKnown RBP5.65□□□□□ -1.51
ZNF540-206ENST00000589117 PPIFP30405 207 aaKnown RBP5.65□□□□□ -1.51
ZNF540-206ENST00000589117 LY6EQ16553 131 aa5.65□□□□□ -1.51
ZNF540-206ENST00000589117 SMPXQ9UHP9 88 aa5.65□□□□□ -1.51
ZNF540-206ENST00000589117 LINC00527Q9UJ94 153 aa5.65□□□□□ -1.51
ZNF540-206ENST00000589117 IGKV3D-20A0A0C4DH25 116 aa5.64□□□□□ -1.51
ZNF540-206ENST00000589117 ATP5LO75964 103 aa5.64□□□□□ -1.51
ZNF540-206ENST00000589117 NCR2O95944 276 aa5.64□□□□□ -1.51
ZNF540-206ENST00000589117 ID1P41134 155 aa5.64□□□□□ -1.51
ZNF540-206ENST00000589117 MPV17L2Q567V2 206 aa5.64□□□□□ -1.51
ZNF540-206ENST00000589117 Q8N8P6 123 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms