RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 OR10G4Q8NGN3 311 aa9.48□□□□□ -0.89
VMP1-209ENST00000588915 RASL10AQ92737 203 aa9.48□□□□□ -0.89
VMP1-209ENST00000588915 GPN1Q9HCN4 374 aaPredicted RBP9.48□□□□□ -0.89
VMP1-209ENST00000588915 IGKV2-40A0A087WW87 121 aaPredicted RBP9.47□□□□□ -0.89
VMP1-209ENST00000588915 TRGV4A0A0C4DH28 118 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 IGSF23A1L1A6 192 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 IGKV2D-40P01614 121 aaPredicted RBP9.47□□□□□ -0.89
VMP1-209ENST00000588915 TCRBP04435 133 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 GCSHP23434 173 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 ZNF266Q14584 549 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 PRR9Q5T870 116 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 FAM167A-AS1Q96KT0 104 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 TXNDC17Q9BRA2 123 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 SLC25A2Q9BXI2 301 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 NPCDR1Q9BY65 106 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 OR51M1Q9H341 326 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 BOLA1Q9Y3E2 137 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 LENEPQ9Y5L5 61 aa9.47□□□□□ -0.89
VMP1-209ENST00000588915 RBAKDNA6NC62 111 aa9.46□□□□□ -0.9
VMP1-209ENST00000588915 PLA2G10O15496 165 aa9.46□□□□□ -0.9
VMP1-209ENST00000588915 LYRM1O43325 122 aa9.46□□□□□ -0.9
VMP1-209ENST00000588915 FUSP35637 526 aaKnown RBP eCLIP9.46□□□□□ -0.9
VMP1-209ENST00000588915 FAM122CQ6P4D5 195 aa9.46□□□□□ -0.9
VMP1-209ENST00000588915 SH2D6Q7Z4S9 175 aa9.46□□□□□ -0.9
VMP1-209ENST00000588915 PCNPQ8WW12 178 aaKnown RBP9.46□□□□□ -0.9
VMP1-209ENST00000588915 E5RGE8 158 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 FAM229AH3BQW9 127 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 GYPEP15421 78 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 CSN1S1P47710 185 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 S100A10P60903 97 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 RAB32Q13637 225 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 GCSAMLQ5JQS6 135 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 Q6AWC8 147 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 Q6ZQT7 251 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 WFDC10BQ8IUB3 73 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 NTN5Q8WTR8 489 aaPredicted RBP9.45□□□□□ -0.9
VMP1-209ENST00000588915 ZNF479Q96JC4 524 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 MYCBP2O75592 4640 aa9.45□□□□□ -0.9
VMP1-209ENST00000588915 TRGV11A0A075B6L2 103 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 TRAV6A0A075B6T7 132 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 C9JCJ5 164 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 TIRAPP58753 221 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 FAM159AQ6UWV7 190 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 MIR17HGQ75NE6 70 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 FXYD5Q96DB9 178 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 SEC22CQ9BRL7 303 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 TMEM70Q9BUB7 260 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 KCNIP2Q9NS61 270 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 MDFICQ9P1T7 246 aa9.44□□□□□ -0.9
VMP1-209ENST00000588915 TRAV4A0A0B4J268 109 aa9.43□□□□□ -0.9
VMP1-209ENST00000588915 CRYGDP07320 174 aa9.43□□□□□ -0.9
VMP1-209ENST00000588915 SFTA3P0C7M3 94 aa9.43□□□□□ -0.9
VMP1-209ENST00000588915 TDRG1Q3Y452 100 aa9.43□□□□□ -0.9
VMP1-209ENST00000588915 TMED6Q8WW62 240 aa9.43□□□□□ -0.9
VMP1-209ENST00000588915 SLC25A31Q9H0C2 315 aa9.43□□□□□ -0.9
VMP1-209ENST00000588915 NUDT15Q9NV35 164 aa9.43□□□□□ -0.9
VMP1-209ENST00000588915 H2AFB2P0C5Z0 115 aa9.42□□□□□ -0.9
VMP1-209ENST00000588915 MUC21Q5SSG8 566 aa9.42□□□□□ -0.9
VMP1-209ENST00000588915 OR5C1Q8NGR4 320 aa9.42□□□□□ -0.9
VMP1-209ENST00000588915 Q8TAT8 98 aa9.42□□□□□ -0.9
VMP1-209ENST00000588915 SRRM2Q9UQ35 2752 aaKnown RBP9.42□□□□□ -0.9
VMP1-209ENST00000588915 IGHV3-38A0A0C4DH36 116 aa9.41□□□□□ -0.9
VMP1-209ENST00000588915 SMR3BP02814 79 aaPredicted RBP9.41□□□□□ -0.9
VMP1-209ENST00000588915 OR10J4P0C629 311 aa9.41□□□□□ -0.9
VMP1-209ENST00000588915 RANP62826 216 aaKnown RBP9.41□□□□□ -0.9
VMP1-209ENST00000588915 NHLH2Q02577 135 aa9.41□□□□□ -0.9
VMP1-209ENST00000588915 TMEM183BQ1AE95 376 aa9.41□□□□□ -0.9
VMP1-209ENST00000588915 TMEM183AQ8IXX5 376 aa9.41□□□□□ -0.9
VMP1-209ENST00000588915 ARL6IP6Q8N6S5 226 aa9.41□□□□□ -0.9
VMP1-209ENST00000588915 OR4C5Q8NGB2 326 aa9.41□□□□□ -0.9
VMP1-209ENST00000588915 PHYHIPLQ96FC7 376 aa9.41□□□□□ -0.9
VMP1-209ENST00000588915 FLG2Q5D862 2391 aaPredicted RBP9.4□□□□□ -0.9
VMP1-209ENST00000588915 IGLV5-52A0A0A0MRZ9 124 aa9.4□□□□□ -0.9
VMP1-209ENST00000588915 LRCOL1A6NCL2 159 aa9.4□□□□□ -0.9
VMP1-209ENST00000588915 IBA57-AS1B1ANH7 110 aa9.4□□□□□ -0.9
VMP1-209ENST00000588915 C17orf112F2Z3M2 114 aa9.4□□□□□ -0.9
VMP1-209ENST00000588915 M0R2P5 195 aa9.4□□□□□ -0.9
VMP1-209ENST00000588915 PSCAO43653 123 aa9.4□□□□□ -0.9
VMP1-209ENST00000588915 CIDEAO60543 219 aa9.4□□□□□ -0.9
VMP1-209ENST00000588915 LINC01556Q5JQF7 62 aa9.4□□□□□ -0.9
VMP1-209ENST00000588915 Q6ZSN1 163 aa9.4□□□□□ -0.9
VMP1-209ENST00000588915 WDR61Q9GZS3 305 aaKnown RBP9.4□□□□□ -0.9
VMP1-209ENST00000588915 DNAH8Q96JB1 4490 aa9.4□□□□□ -0.9
VMP1-209ENST00000588915 DIRC3C9JPN6 131 aa9.39□□□□□ -0.91
VMP1-209ENST00000588915 OR7C2O60412 319 aa9.39□□□□□ -0.91
VMP1-209ENST00000588915 C1QBP02746 253 aa9.39□□□□□ -0.91
VMP1-209ENST00000588915 THAP6Q8TBB0 222 aa9.39□□□□□ -0.91
VMP1-209ENST00000588915 PFN1P07737 140 aaKnown RBP9.38□□□□□ -0.91
VMP1-209ENST00000588915 GATA1P15976 413 aaPredicted RBP9.38□□□□□ -0.91
VMP1-209ENST00000588915 CCDC32Q9BV29 185 aa9.38□□□□□ -0.91
VMP1-209ENST00000588915 NMES1Q9C002 83 aa9.38□□□□□ -0.91
VMP1-209ENST00000588915 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
VMP1-209ENST00000588915 TRAV21A0A0B4J279 112 aa9.37□□□□□ -0.91
VMP1-209ENST00000588915 FAM240BA0A1B0GVZ2 78 aa9.37□□□□□ -0.91
VMP1-209ENST00000588915 TAS2R45P59539 299 aa9.37□□□□□ -0.91
VMP1-209ENST00000588915 CYCSP99999 105 aaKnown RBP9.37□□□□□ -0.91
VMP1-209ENST00000588915 FAM74A1Q5RGS3 127 aa9.37□□□□□ -0.91
VMP1-209ENST00000588915 KCNS1Q96KK3 526 aa9.37□□□□□ -0.91
VMP1-209ENST00000588915 IGHV3-16A0A0C4DH30 117 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms