RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ZNF727A8MUV8 499 aa12.42□□□□□ -0.42
SCAMP4-211ENST00000588907 SRSF3P84103 164 aaKnown RBP12.42□□□□□ -0.42
SCAMP4-211ENST00000588907 DEFA6Q01524 100 aa12.42□□□□□ -0.42
SCAMP4-211ENST00000588907 ZNF674Q2M3X9 581 aa12.42□□□□□ -0.42
SCAMP4-211ENST00000588907 NIPSNAP3BQ9BS92 247 aa12.42□□□□□ -0.42
SCAMP4-211ENST00000588907 GOLT1BQ9Y3E0 138 aa12.42□□□□□ -0.42
SCAMP4-211ENST00000588907 TRAV21A0A0B4J279 112 aa12.41□□□□□ -0.42
SCAMP4-211ENST00000588907 GFI1BQ5VTD9 330 aa12.41□□□□□ -0.42
SCAMP4-211ENST00000588907 Q6AWC8 147 aa12.41□□□□□ -0.42
SCAMP4-211ENST00000588907 ASCL2Q99929 193 aa12.41□□□□□ -0.42
SCAMP4-211ENST00000588907 MLST8Q9BVC4 326 aa12.41□□□□□ -0.42
SCAMP4-211ENST00000588907 XCL2Q9UBD3 114 aa12.41□□□□□ -0.42
SCAMP4-211ENST00000588907 TP53TG1Q9Y2A0 90 aa12.41□□□□□ -0.42
SCAMP4-211ENST00000588907 C9JQL5 133 aa12.4□□□□□ -0.42
SCAMP4-211ENST00000588907 CRXO43186 299 aaPredicted RBP12.4□□□□□ -0.42
SCAMP4-211ENST00000588907 GIG44P09565 113 aaPredicted RBP12.4□□□□□ -0.42
SCAMP4-211ENST00000588907 SFTA3P0C7M3 94 aa12.4□□□□□ -0.42
SCAMP4-211ENST00000588907 TVP23CQ96ET8 276 aa12.4□□□□□ -0.42
SCAMP4-211ENST00000588907 RCHY1Q96PM5 261 aa12.4□□□□□ -0.42
SCAMP4-211ENST00000588907 TRAV12-2A0A075B6T6 113 aa12.39□□□□□ -0.43
SCAMP4-211ENST00000588907 H7BYZ3 331 aa12.39□□□□□ -0.43
SCAMP4-211ENST00000588907 GCGP01275 180 aa12.39□□□□□ -0.43
SCAMP4-211ENST00000588907 PFN1P07737 140 aaKnown RBP12.39□□□□□ -0.43
SCAMP4-211ENST00000588907 RNASE4P34096 147 aaKnown RBP12.39□□□□□ -0.43
SCAMP4-211ENST00000588907 FXYD7P58549 80 aa12.39□□□□□ -0.43
SCAMP4-211ENST00000588907 FAM162BQ5T6X4 162 aa12.39□□□□□ -0.43
SCAMP4-211ENST00000588907 B9D2Q9BPU9 175 aa12.39□□□□□ -0.43
SCAMP4-211ENST00000588907 BTN1A1Q13410 526 aa12.38□□□□□ -0.43
SCAMP4-211ENST00000588907 CSNK1G2-AS1Q8NCQ2 148 aa12.38□□□□□ -0.43
SCAMP4-211ENST00000588907 C8orf49Q96NF6 230 aa12.38□□□□□ -0.43
SCAMP4-211ENST00000588907 PYGO2Q9BRQ0 406 aa12.38□□□□□ -0.43
SCAMP4-211ENST00000588907 TMEM208Q9BTX3 173 aa12.38□□□□□ -0.43
SCAMP4-211ENST00000588907 NAT8Q9UHE5 227 aa12.38□□□□□ -0.43
SCAMP4-211ENST00000588907 TRBV20OR9-2A0A075B6H5 130 aa12.37□□□□□ -0.43
SCAMP4-211ENST00000588907 TRAV12-3A0A0B4J271 114 aa12.37□□□□□ -0.43
SCAMP4-211ENST00000588907 FABP5P3A8MUU1 101 aa12.37□□□□□ -0.43
SCAMP4-211ENST00000588907 J3KRW8 73 aa12.37□□□□□ -0.43
SCAMP4-211ENST00000588907 TMEM241Q24JQ0 296 aa12.37□□□□□ -0.43
SCAMP4-211ENST00000588907 RNF183Q96D59 192 aa12.37□□□□□ -0.43
SCAMP4-211ENST00000588907 ZC2HC1AQ96GY0 325 aa12.37□□□□□ -0.43
SCAMP4-211ENST00000588907 SPATA25Q9BR10 227 aa12.37□□□□□ -0.43
SCAMP4-211ENST00000588907 TMEM218A2RU14 115 aa12.36□□□□□ -0.43
SCAMP4-211ENST00000588907 SMIM9A6NGZ8 99 aa12.36□□□□□ -0.43
SCAMP4-211ENST00000588907 ZNF324O75467 553 aaPredicted RBP12.36□□□□□ -0.43
SCAMP4-211ENST00000588907 MGST1P10620 155 aaKnown RBP12.36□□□□□ -0.43
SCAMP4-211ENST00000588907 DEFB135Q30KP9 77 aa12.36□□□□□ -0.43
SCAMP4-211ENST00000588907 PRR9Q5T870 116 aa12.36□□□□□ -0.43
SCAMP4-211ENST00000588907 ZNF705AQ6ZN79 300 aaPredicted RBP12.36□□□□□ -0.43
SCAMP4-211ENST00000588907 LINC00467Q9BRT7 94 aa12.36□□□□□ -0.43
SCAMP4-211ENST00000588907 SPRY2O43597 315 aa12.35□□□□□ -0.43
SCAMP4-211ENST00000588907 IGLV2-8P01709 118 aa12.35□□□□□ -0.43
SCAMP4-211ENST00000588907 PNRC1Q12796 327 aaPredicted RBP12.35□□□□□ -0.43
SCAMP4-211ENST00000588907 NHLRC2Q8NBF2 726 aa12.35□□□□□ -0.43
SCAMP4-211ENST00000588907 DAZAP1Q96EP5 407 aaKnown RBP12.35□□□□□ -0.43
SCAMP4-211ENST00000588907 KCNS1Q96KK3 526 aa12.35□□□□□ -0.43
SCAMP4-211ENST00000588907 LINC01587Q99440 93 aa12.35□□□□□ -0.43
SCAMP4-211ENST00000588907 NEU1Q99519 415 aa12.35□□□□□ -0.43
SCAMP4-211ENST00000588907 TM2D3Q9BRN9 247 aa12.35□□□□□ -0.43
SCAMP4-211ENST00000588907 SEC11CQ9BY50 192 aa12.35□□□□□ -0.43
SCAMP4-211ENST00000588907 ZMAT4Q9H898 229 aa12.35□□□□□ -0.43
SCAMP4-211ENST00000588907 NHLRC4P0CG21 123 aaPredicted RBP12.34□□□□□ -0.43
SCAMP4-211ENST00000588907 KIR3DS1Q14943 382 aa12.34□□□□□ -0.43
SCAMP4-211ENST00000588907 TDRG1Q3Y452 100 aa12.34□□□□□ -0.43
SCAMP4-211ENST00000588907 FAM159AQ6UWV7 190 aa12.34□□□□□ -0.43
SCAMP4-211ENST00000588907 LINC01551Q86U37 167 aa12.34□□□□□ -0.43
SCAMP4-211ENST00000588907 SBSPONQ8IVN8 264 aa12.34□□□□□ -0.43
SCAMP4-211ENST00000588907 C1orf158Q8N1D5 194 aa12.34□□□□□ -0.43
SCAMP4-211ENST00000588907 OCC1Q8TAD7 63 aa12.34□□□□□ -0.43
SCAMP4-211ENST00000588907 F8W036 122 aa12.33□□□□□ -0.44
SCAMP4-211ENST00000588907 PRR27Q6MZM9 219 aa12.33□□□□□ -0.44
SCAMP4-211ENST00000588907 IGHV1OR15-1A0A075B7D0 117 aa12.32□□□□□ -0.44
SCAMP4-211ENST00000588907 KRBOX1C9JBD0 128 aa12.32□□□□□ -0.44
SCAMP4-211ENST00000588907 SH2D1AO60880 128 aa12.32□□□□□ -0.44
SCAMP4-211ENST00000588907 RBMY1A1P0DJD3 496 aaKnown RBP12.32□□□□□ -0.44
SCAMP4-211ENST00000588907 RBMY1CP0DJD4 496 aa12.32□□□□□ -0.44
SCAMP4-211ENST00000588907 MIFP14174 115 aa12.32□□□□□ -0.44
SCAMP4-211ENST00000588907 ZNF80P51504 273 aaPredicted RBP12.32□□□□□ -0.44
SCAMP4-211ENST00000588907 RBMY1FQ15415 496 aaKnown RBP12.32□□□□□ -0.44
SCAMP4-211ENST00000588907 ZNF493Q6ZR52 646 aa12.32□□□□□ -0.44
SCAMP4-211ENST00000588907 OR11H2Q8NH07 326 aa12.32□□□□□ -0.44
SCAMP4-211ENST00000588907 SDF2L1Q9HCN8 221 aa12.32□□□□□ -0.44
SCAMP4-211ENST00000588907 MEGF8Q7Z7M0 2845 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 TRGV11A0A075B6L2 103 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 IGHV3OR16-12A0A075B7B8 117 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 XKRY2A2RUG3 117 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 PGPEP1LA6NFU8 196 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 P01737 135 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 ADIRFQ15847 76 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 RRN3P1Q2M238 152 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 ANXA2RQ3ZCQ2 193 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 LINC01559Q495D7 138 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 FAM231DQ6ZW35 169 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 OVOL2Q9BRP0 275 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 NAGKQ9UJ70 344 aa12.31□□□□□ -0.44
SCAMP4-211ENST00000588907 PRKDCP78527 4128 aaKnown RBP12.3□□□□□ -0.44
SCAMP4-211ENST00000588907 TMEM189A5PLL7 270 aa12.3□□□□□ -0.44
SCAMP4-211ENST00000588907 C19orf71A6NCJ1 209 aa12.3□□□□□ -0.44
SCAMP4-211ENST00000588907 K7EN84 100 aa12.3□□□□□ -0.44
SCAMP4-211ENST00000588907 CRIP1P50238 77 aa12.3□□□□□ -0.44
SCAMP4-211ENST00000588907 RPL23P62829 140 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms