RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 VMA21Q3ZAQ7 101 aa3.5□□□□□ -1.85
VMP1-208ENST00000588617 C4orf22Q6V702 233 aa3.5□□□□□ -1.85
VMP1-208ENST00000588617 LINC00305Q7Z4B0 112 aa3.5□□□□□ -1.85
VMP1-208ENST00000588617 COA5Q86WW8 74 aa3.5□□□□□ -1.85
VMP1-208ENST00000588617 SRCAPQ6ZRS2 3230 aa3.49□□□□□ -1.85
VMP1-208ENST00000588617 TRAV14DV4A0A0A6YYC5 116 aa3.49□□□□□ -1.85
VMP1-208ENST00000588617 C2orf70A6NJV1 201 aa3.49□□□□□ -1.85
VMP1-208ENST00000588617 FP248Q71RG6 208 aaPredicted RBP3.49□□□□□ -1.85
VMP1-208ENST00000588617 OR8I2Q8N0Y5 310 aa3.49□□□□□ -1.85
VMP1-208ENST00000588617 TEX29Q8N6K0 151 aa3.49□□□□□ -1.85
VMP1-208ENST00000588617 POP5Q969H6 163 aaKnown RBP3.49□□□□□ -1.85
VMP1-208ENST00000588617 RASL12Q9NYN1 266 aa3.49□□□□□ -1.85
VMP1-208ENST00000588617 ICE1Q9Y2F5 2266 aa3.49□□□□□ -1.85
VMP1-208ENST00000588617 UTRNP46939 3433 aa3.48□□□□□ -1.85
VMP1-208ENST00000588617 BORCS7-ASMTA0A0B4J1R7 106 aa3.48□□□□□ -1.85
VMP1-208ENST00000588617 LOC107984640A0A0U1RRK4 108 aa3.48□□□□□ -1.85
VMP1-208ENST00000588617 PSG9Q00887 426 aa3.48□□□□□ -1.85
VMP1-208ENST00000588617 SFT2D1Q8WV19 159 aa3.48□□□□□ -1.85
VMP1-208ENST00000588617 OR5AC2Q9NZP5 309 aa3.48□□□□□ -1.85
VMP1-208ENST00000588617 MYH7P12883 1935 aa3.48□□□□□ -1.85
VMP1-208ENST00000588617 ANKRD31Q8N7Z5 1873 aa3.47□□□□□ -1.85
VMP1-208ENST00000588617 DDX60LQ5H9U9 1706 aaKnown RBP3.47□□□□□ -1.85
VMP1-208ENST00000588617 TRAV12-1A0A0B4J245 112 aa3.47□□□□□ -1.85
VMP1-208ENST00000588617 C17orf112F2Z3M2 114 aa3.47□□□□□ -1.85
VMP1-208ENST00000588617 GPX1P07203 203 aa3.47□□□□□ -1.85
VMP1-208ENST00000588617 ROMO1P60602 79 aa3.47□□□□□ -1.85
VMP1-208ENST00000588617 DEFB132Q7Z7B7 95 aa3.47□□□□□ -1.85
VMP1-208ENST00000588617 RPS19BP1Q86WX3 136 aaKnown RBP3.47□□□□□ -1.85
VMP1-208ENST00000588617 OR5H6Q8NGV6 325 aa3.47□□□□□ -1.85
VMP1-208ENST00000588617 TMEM254Q8TBM7 123 aa3.47□□□□□ -1.85
VMP1-208ENST00000588617 BORCS5Q969J3 196 aa3.47□□□□□ -1.85
VMP1-208ENST00000588617 TMEM138Q9NPI0 162 aa3.47□□□□□ -1.85
VMP1-208ENST00000588617 CASZ1Q86V15 1759 aa3.47□□□□□ -1.85
VMP1-208ENST00000588617 MYO5AQ9Y4I1 1855 aaKnown RBP3.47□□□□□ -1.85
VMP1-208ENST00000588617 DLEC1Q9Y238 1755 aa3.46□□□□□ -1.86
VMP1-208ENST00000588617 TRBV7-6A0A0J9YX20 115 aa3.46□□□□□ -1.86
VMP1-208ENST00000588617 M0R233 179 aa3.46□□□□□ -1.86
VMP1-208ENST00000588617 CMPK1P30085 196 aa3.46□□□□□ -1.86
VMP1-208ENST00000588617 BRS3P32247 399 aa3.46□□□□□ -1.86
VMP1-208ENST00000588617 RAB5CP51148 216 aa3.46□□□□□ -1.86
VMP1-208ENST00000588617 FAM216BQ8N7L0 139 aa3.46□□□□□ -1.86
VMP1-208ENST00000588617 OR5D14Q8NGL3 314 aa3.46□□□□□ -1.86
VMP1-208ENST00000588617 Q96M85 177 aa3.46□□□□□ -1.86
VMP1-208ENST00000588617 LAMB1P07942 1786 aa3.46□□□□□ -1.86
VMP1-208ENST00000588617 TRAV13-1A0A0B4J241 112 aa3.45□□□□□ -1.86
VMP1-208ENST00000588617 TMEM189A5PLL7 270 aa3.45□□□□□ -1.86
VMP1-208ENST00000588617 B4DSR2 109 aa3.45□□□□□ -1.86
VMP1-208ENST00000588617 F8W036 122 aa3.45□□□□□ -1.86
VMP1-208ENST00000588617 DBIP07108 87 aaKnown RBP3.45□□□□□ -1.86
VMP1-208ENST00000588617 SDC4P31431 198 aa3.45□□□□□ -1.86
VMP1-208ENST00000588617 MCEEQ96PE7 176 aa3.45□□□□□ -1.86
VMP1-208ENST00000588617 TAF9BQ9HBM6 251 aa3.45□□□□□ -1.86
VMP1-208ENST00000588617 MYH10P35580 1976 aa3.45□□□□□ -1.86
VMP1-208ENST00000588617 MDC1Q14676 2089 aaKnown RBP3.45□□□□□ -1.86
VMP1-208ENST00000588617 IGKV2D-26A0A0A0MRZ7 120 aa3.44□□□□□ -1.86
VMP1-208ENST00000588617 OR2T8A6NH00 312 aa3.44□□□□□ -1.86
VMP1-208ENST00000588617 DPM2O94777 84 aa3.44□□□□□ -1.86
VMP1-208ENST00000588617 CKS1BP61024 79 aa3.44□□□□□ -1.86
VMP1-208ENST00000588617 DEFB103AP81534 67 aa3.44□□□□□ -1.86
VMP1-208ENST00000588617 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
VMP1-208ENST00000588617 Q6ZRN7 208 aaPredicted RBP3.44□□□□□ -1.86
VMP1-208ENST00000588617 OR4B1Q8NGF8 309 aa3.44□□□□□ -1.86
VMP1-208ENST00000588617 PRELID3AQ96N28 172 aa3.44□□□□□ -1.86
VMP1-208ENST00000588617 CBLN4Q9NTU7 201 aa3.44□□□□□ -1.86
VMP1-208ENST00000588617 MYH13Q9UKX3 1938 aa3.44□□□□□ -1.86
VMP1-208ENST00000588617 H3BMG7 143 aa3.43□□□□□ -1.86
VMP1-208ENST00000588617 HMGN1P05114 100 aa3.43□□□□□ -1.86
VMP1-208ENST00000588617 PDE6HQ13956 83 aa3.43□□□□□ -1.86
VMP1-208ENST00000588617 CDK5R1Q15078 307 aa3.43□□□□□ -1.86
VMP1-208ENST00000588617 CLECL1Q8IZS7 167 aa3.43□□□□□ -1.86
VMP1-208ENST00000588617 Q8N814 137 aa3.43□□□□□ -1.86
VMP1-208ENST00000588617 BRK1Q8WUW1 75 aa3.43□□□□□ -1.86
VMP1-208ENST00000588617 ZCCHC13Q8WW36 166 aaKnown RBP3.43□□□□□ -1.86
VMP1-208ENST00000588617 ANAPC1Q9H1A4 1944 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 FOCADQ5VW36 1801 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 TRBV27A0A0K0K1C4 114 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 M0QZK8 103 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 LYRM1O43325 122 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 TNFSF15O95150 251 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 IGLV1-51P01701 117 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 CDK6Q00534 326 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 C1orf134Q5TEV5 83 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 FAM107BQ9H098 131 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 CACNA1GO43497 2377 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 MICAL3Q7RTP6 2002 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 COL4A5P29400 1685 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 PSME4Q14997 1843 aa3.42□□□□□ -1.86
VMP1-208ENST00000588617 FN1P02751 2386 aaKnown RBP3.41□□□□□ -1.86
VMP1-208ENST00000588617 RP1P56715 2156 aa3.41□□□□□ -1.86
VMP1-208ENST00000588617 TRBV6-5A0A0K0K1A5 114 aa3.41□□□□□ -1.86
VMP1-208ENST00000588617 C9JAW5 83 aa3.41□□□□□ -1.86
VMP1-208ENST00000588617 TCTE3Q8IZS6 198 aa3.41□□□□□ -1.86
VMP1-208ENST00000588617 OR51A4Q8NGJ6 313 aa3.41□□□□□ -1.86
VMP1-208ENST00000588617 DIRC1Q969H9 104 aa3.41□□□□□ -1.86
VMP1-208ENST00000588617 MUCL1Q96DR8 90 aa3.41□□□□□ -1.86
VMP1-208ENST00000588617 HYLS1Q96M11 299 aa3.41□□□□□ -1.86
VMP1-208ENST00000588617 NIT2Q9NQR4 276 aa3.41□□□□□ -1.86
VMP1-208ENST00000588617 HIGD1AQ9Y241 93 aa3.41□□□□□ -1.86
VMP1-208ENST00000588617 TCRBV4S1A1TA0A5B7 111 aa3.4□□□□□ -1.87
VMP1-208ENST00000588617 hDV103S1A0JD37 113 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms