RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 HIF1ANQ9NWT6 349 aa13.05□□□□□ -0.32
SSC5D-203ENST00000588254 NBR2O15453 112 aa13.04□□□□□ -0.32
SSC5D-203ENST00000588254 SMAD5-AS1Q9Y6J3 95 aa13.04□□□□□ -0.32
SSC5D-203ENST00000588254 MFAP4P55083 255 aa13.04□□□□□ -0.32
SSC5D-203ENST00000588254 ZNF418Q8TF45 676 aaPredicted RBP13.04□□□□□ -0.32
SSC5D-203ENST00000588254 PHLDA1Q8WV24 401 aaPredicted RBP13.04□□□□□ -0.32
SSC5D-203ENST00000588254 FANCD2OSQ96PS1 177 aa13.04□□□□□ -0.32
SSC5D-203ENST00000588254 C20orf78Q9BR46 151 aa13.04□□□□□ -0.32
SSC5D-203ENST00000588254 SPANXB1Q9NS25 103 aaPredicted RBP13.04□□□□□ -0.32
SSC5D-203ENST00000588254 SPG11Q96JI7 2443 aa13.04□□□□□ -0.32
SSC5D-203ENST00000588254 ECSCRQ19T08 205 aa13.04□□□□□ -0.32
SSC5D-203ENST00000588254 C12orf74Q32Q52 190 aa13.04□□□□□ -0.32
SSC5D-203ENST00000588254 LINC01560Q8TB33 94 aa13.04□□□□□ -0.32
SSC5D-203ENST00000588254 C11orf21Q9P2W6 132 aa13.04□□□□□ -0.32
SSC5D-203ENST00000588254 HRNRQ86YZ3 2850 aaPredicted RBP13.03□□□□□ -0.32
SSC5D-203ENST00000588254 IGKV3-7A0A075B6H7 116 aa13.03□□□□□ -0.32
SSC5D-203ENST00000588254 LOC107984156A0A0G2JMH3 177 aa13.03□□□□□ -0.32
SSC5D-203ENST00000588254 PRR30Q53SZ7 412 aaPredicted RBP13.03□□□□□ -0.32
SSC5D-203ENST00000588254 CCDC144NLQ6NUI1 221 aa13.03□□□□□ -0.32
SSC5D-203ENST00000588254 ASCL5Q7RTU5 278 aa13.03□□□□□ -0.32
SSC5D-203ENST00000588254 ZNF575Q86XF7 245 aa13.03□□□□□ -0.32
SSC5D-203ENST00000588254 ARL17AQ8IVW1 177 aa13.03□□□□□ -0.32
SSC5D-203ENST00000588254 MYOZ3Q8TDC0 251 aa13.03□□□□□ -0.32
SSC5D-203ENST00000588254 BMI1P35226 326 aa13.03□□□□□ -0.32
SSC5D-203ENST00000588254 GATD1Q8NB37 220 aa13.03□□□□□ -0.32
SSC5D-203ENST00000588254 MUC6Q6W4X9 2439 aa13.03□□□□□ -0.32
SSC5D-203ENST00000588254 SORL1Q92673 2214 aa13.03□□□□□ -0.32
SSC5D-203ENST00000588254 IGLC6P0CF74 106 aa13.02□□□□□ -0.32
SSC5D-203ENST00000588254 LYPD1Q8N2G4 141 aa13.02□□□□□ -0.32
SSC5D-203ENST00000588254 PTH2Q96A98 100 aa13.02□□□□□ -0.32
SSC5D-203ENST00000588254 IGHG4P01861 327 aa13.02□□□□□ -0.33
SSC5D-203ENST00000588254 RPL7P18124 248 aaKnown RBP13.02□□□□□ -0.33
SSC5D-203ENST00000588254 FABP5P3A8MUU1 101 aa13.02□□□□□ -0.33
SSC5D-203ENST00000588254 F8W735 103 aaPredicted RBP13.02□□□□□ -0.33
SSC5D-203ENST00000588254 M0R381 172 aa13.02□□□□□ -0.33
SSC5D-203ENST00000588254 SPANXN1Q5VSR9 72 aa13.02□□□□□ -0.33
SSC5D-203ENST00000588254 FOXI2Q6ZQN5 318 aa13.02□□□□□ -0.33
SSC5D-203ENST00000588254 TTC9CQ8N5M4 171 aa13.02□□□□□ -0.33
SSC5D-203ENST00000588254 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.01□□□□□ -0.33
SSC5D-203ENST00000588254 H3BVH4 76 aa13.01□□□□□ -0.33
SSC5D-203ENST00000588254 TNFRSF13BO14836 293 aaPredicted RBP13.01□□□□□ -0.33
SSC5D-203ENST00000588254 CD300EQ496F6 205 aaPredicted RBP13.01□□□□□ -0.33
SSC5D-203ENST00000588254 GAGE13Q4V321 117 aa13.01□□□□□ -0.33
SSC5D-203ENST00000588254 RAB9AP51151 201 aa13.01□□□□□ -0.33
SSC5D-203ENST00000588254 IGKV3D-20A0A0C4DH25 116 aa13□□□□□ -0.33
SSC5D-203ENST00000588254 APOMO95445 188 aa13□□□□□ -0.33
SSC5D-203ENST00000588254 CEACAM3P40198 252 aa13□□□□□ -0.33
SSC5D-203ENST00000588254 FAM57AQ8TBR7 257 aa13□□□□□ -0.33
SSC5D-203ENST00000588254 GLMPQ8WWB7 406 aa13□□□□□ -0.33
SSC5D-203ENST00000588254 VKORC1Q9BQB6 163 aa13□□□□□ -0.33
SSC5D-203ENST00000588254 CEACAM4O75871 244 aa13□□□□□ -0.33
SSC5D-203ENST00000588254 NXT2Q9NPJ8 142 aaKnown RBP13□□□□□ -0.33
SSC5D-203ENST00000588254 TRBV6-1A0A0K0K1D8 114 aa12.99□□□□□ -0.33
SSC5D-203ENST00000588254 LINC01548A6NM66 108 aa12.99□□□□□ -0.33
SSC5D-203ENST00000588254 IGF1P05019 195 aa12.99□□□□□ -0.33
SSC5D-203ENST00000588254 PGPEP1Q9NXJ5 209 aa12.99□□□□□ -0.33
SSC5D-203ENST00000588254 VSTM5A8MXK1 200 aa12.99□□□□□ -0.33
SSC5D-203ENST00000588254 E9PLD3 99 aa12.99□□□□□ -0.33
SSC5D-203ENST00000588254 GRNP28799 593 aaKnown RBP12.99□□□□□ -0.33
SSC5D-203ENST00000588254 C3orf36Q3SXR2 165 aa12.99□□□□□ -0.33
SSC5D-203ENST00000588254 CFAP161Q6P656 301 aa12.99□□□□□ -0.33
SSC5D-203ENST00000588254 SCGB1D4Q6XE38 83 aa12.99□□□□□ -0.33
SSC5D-203ENST00000588254 ZNF502Q8TBZ5 544 aa12.99□□□□□ -0.33
SSC5D-203ENST00000588254 MRPL16Q9NX20 251 aaKnown RBP12.99□□□□□ -0.33
SSC5D-203ENST00000588254 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.98□□□□□ -0.33
SSC5D-203ENST00000588254 SHISA9B4DS77 424 aa12.98□□□□□ -0.33
SSC5D-203ENST00000588254 C8orf31Q8N9H6 132 aa12.98□□□□□ -0.33
SSC5D-203ENST00000588254 LINC00527Q9UJ94 153 aa12.98□□□□□ -0.33
SSC5D-203ENST00000588254 VPS13CQ709C8 3753 aa12.98□□□□□ -0.33
SSC5D-203ENST00000588254 CTSGP08311 255 aa12.98□□□□□ -0.33
SSC5D-203ENST00000588254 HLA-DRB4P13762 266 aa12.98□□□□□ -0.33
SSC5D-203ENST00000588254 PDE6HQ13956 83 aa12.98□□□□□ -0.33
SSC5D-203ENST00000588254 KLHL30-AS1Q8NEE0 82 aa12.98□□□□□ -0.33
SSC5D-203ENST00000588254 HLA-DRB4X5D2U9 266 aa12.98□□□□□ -0.33
SSC5D-203ENST00000588254 J3QR89 54 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 PSMB2P49721 201 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 CKS1BP61024 79 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 C5orf64Q2M2E5 130 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 CLEC3BP05452 202 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 MGPP08493 103 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 LAGE3Q14657 143 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 RAB1BQ9H0U4 201 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 DPM3Q9P2X0 92 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 CHTOPQ9Y3Y2 248 aaKnown RBP12.97□□□□□ -0.33
SSC5D-203ENST00000588254 IGLV11-55A0A075B6I3 123 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 OR11H12B2RN74 326 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 Q6ZS92 163 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 OR11H1Q8NG94 326 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 OR11H2Q8NH07 326 aa12.97□□□□□ -0.33
SSC5D-203ENST00000588254 RPL39LQ96EH5 51 aaKnown RBP12.97□□□□□ -0.33
SSC5D-203ENST00000588254 FAM90A27PA6NNH2 459 aa12.96□□□□□ -0.33
SSC5D-203ENST00000588254 NDUFS8O00217 210 aa12.96□□□□□ -0.33
SSC5D-203ENST00000588254 SYT8Q8NBV8 401 aa12.96□□□□□ -0.33
SSC5D-203ENST00000588254 ATP6V0BQ99437 205 aa12.96□□□□□ -0.33
SSC5D-203ENST00000588254 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
SSC5D-203ENST00000588254 KAAG1Q9UBP8 84 aa12.96□□□□□ -0.33
SSC5D-203ENST00000588254 NOTCH3Q9UM47 2321 aa12.96□□□□□ -0.33
SSC5D-203ENST00000588254 SRSF9Q13242 221 aaKnown RBP eCLIP12.96□□□□□ -0.34
SSC5D-203ENST00000588254 C15orf32Q32M92 178 aa12.96□□□□□ -0.34
SSC5D-203ENST00000588254 CLEC19AQ6UXS0 136 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms