RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 VSIG2Q96IQ7 327 aa11.75□□□□□ -0.53
TRIM47-203ENST00000586495 MBD2Q9UBB5 411 aa11.75□□□□□ -0.53
TRIM47-203ENST00000586495 TP53TG3Q9ULZ0 132 aa11.75□□□□□ -0.53
TRIM47-203ENST00000586495 LENEPQ9Y5L5 61 aa11.75□□□□□ -0.53
TRIM47-203ENST00000586495 PKHD1P08F94 4074 aa11.75□□□□□ -0.53
TRIM47-203ENST00000586495 A0A096LPF7 62 aa11.74□□□□□ -0.53
TRIM47-203ENST00000586495 A0A1W2PPQ1 181 aa11.74□□□□□ -0.53
TRIM47-203ENST00000586495 ZNF415Q09FC8 603 aa11.74□□□□□ -0.53
TRIM47-203ENST00000586495 SLAQ13239 276 aa11.74□□□□□ -0.53
TRIM47-203ENST00000586495 ZNF266Q14584 549 aa11.74□□□□□ -0.53
TRIM47-203ENST00000586495 FAM74A1Q5RGS3 127 aa11.74□□□□□ -0.53
TRIM47-203ENST00000586495 ST6GAL2Q96JF0 529 aa11.74□□□□□ -0.53
TRIM47-203ENST00000586495 A0A1W2PPV4 95 aa11.73□□□□□ -0.53
TRIM47-203ENST00000586495 DIRC3C9JPN6 131 aa11.73□□□□□ -0.53
TRIM47-203ENST00000586495 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
TRIM47-203ENST00000586495 PQLC2Q6ZP29 291 aa11.73□□□□□ -0.53
TRIM47-203ENST00000586495 Q6ZQT7 251 aa11.73□□□□□ -0.53
TRIM47-203ENST00000586495 CMTM2Q8TAZ6 248 aa11.73□□□□□ -0.53
TRIM47-203ENST00000586495 MRPL16Q9NX20 251 aaKnown RBP11.73□□□□□ -0.53
TRIM47-203ENST00000586495 ICOSQ9Y6W8 199 aa11.73□□□□□ -0.53
TRIM47-203ENST00000586495 MUC4Q99102 2169 aa11.72□□□□□ -0.53
TRIM47-203ENST00000586495 PGPA6NDG6 321 aa11.72□□□□□ -0.53
TRIM47-203ENST00000586495 PAX4O43316 350 aa11.72□□□□□ -0.53
TRIM47-203ENST00000586495 TMED6Q8WW62 240 aa11.72□□□□□ -0.53
TRIM47-203ENST00000586495 BATF3Q9NR55 127 aa11.72□□□□□ -0.53
TRIM47-203ENST00000586495 OTORQ9NRC9 128 aa11.72□□□□□ -0.53
TRIM47-203ENST00000586495 PRO0255Q9UI72 69 aa11.72□□□□□ -0.53
TRIM47-203ENST00000586495 C16orf90A8MZG2 172 aa11.71□□□□□ -0.53
TRIM47-203ENST00000586495 MUC21Q5SSG8 566 aa11.71□□□□□ -0.53
TRIM47-203ENST00000586495 Q6AWC8 147 aa11.71□□□□□ -0.53
TRIM47-203ENST00000586495 FAM159AQ6UWV7 190 aa11.71□□□□□ -0.53
TRIM47-203ENST00000586495 HYLS1Q96M11 299 aa11.71□□□□□ -0.53
TRIM47-203ENST00000586495 WFDC1Q9HC57 220 aa11.71□□□□□ -0.53
TRIM47-203ENST00000586495 TRGV11A0A075B6L2 103 aa11.7□□□□□ -0.54
TRIM47-203ENST00000586495 IGHV3-53P01767 116 aa11.7□□□□□ -0.54
TRIM47-203ENST00000586495 ARL6IP6Q8N6S5 226 aa11.7□□□□□ -0.54
TRIM47-203ENST00000586495 SPXQ9BT56 116 aa11.7□□□□□ -0.54
TRIM47-203ENST00000586495 KRTAP1-5Q9BYS1 174 aa11.7□□□□□ -0.54
TRIM47-203ENST00000586495 RPH3ALQ9UNE2 315 aa11.7□□□□□ -0.54
TRIM47-203ENST00000586495 HHLA3Q9XRX5 114 aa11.7□□□□□ -0.54
TRIM47-203ENST00000586495 PKD1P98161 4303 aa11.69□□□□□ -0.54
TRIM47-203ENST00000586495 OR10G4Q8NGN3 311 aa11.69□□□□□ -0.54
TRIM47-203ENST00000586495 OR10G9Q8NGN4 311 aa11.69□□□□□ -0.54
TRIM47-203ENST00000586495 OR10G7Q8NGN6 311 aa11.69□□□□□ -0.54
TRIM47-203ENST00000586495 MDFICQ9P1T7 246 aa11.69□□□□□ -0.54
TRIM47-203ENST00000586495 TRGV4A0A0C4DH28 118 aa11.68□□□□□ -0.54
TRIM47-203ENST00000586495 CRYBA4P53673 196 aa11.68□□□□□ -0.54
TRIM47-203ENST00000586495 FHL2Q14192 279 aa11.68□□□□□ -0.54
TRIM47-203ENST00000586495 MRPL23Q16540 153 aaKnown RBP11.68□□□□□ -0.54
TRIM47-203ENST00000586495 TMEM183BQ1AE95 376 aa11.68□□□□□ -0.54
TRIM47-203ENST00000586495 TMEM183AQ8IXX5 376 aa11.68□□□□□ -0.54
TRIM47-203ENST00000586495 ALG5Q9Y673 324 aa11.68□□□□□ -0.54
TRIM47-203ENST00000586495 DNAH11Q96DT5 4516 aa11.68□□□□□ -0.54
TRIM47-203ENST00000586495 SIVA1O15304 175 aa11.67□□□□□ -0.54
TRIM47-203ENST00000586495 EIF3GO75821 320 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRIM47-203ENST00000586495 RAB2AP61019 212 aa11.67□□□□□ -0.54
TRIM47-203ENST00000586495 GOLT1AQ6ZVE7 132 aa11.67□□□□□ -0.54
TRIM47-203ENST00000586495 RASL10AQ92737 203 aa11.67□□□□□ -0.54
TRIM47-203ENST00000586495 C8orf49Q96NF6 230 aa11.67□□□□□ -0.54
TRIM47-203ENST00000586495 TRAV21A0A0B4J279 112 aa11.66□□□□□ -0.54
TRIM47-203ENST00000586495 TDRG1Q3Y452 100 aa11.66□□□□□ -0.54
TRIM47-203ENST00000586495 NEGR1Q7Z3B1 354 aa11.66□□□□□ -0.54
TRIM47-203ENST00000586495 IQCF2Q8IXL9 164 aa11.66□□□□□ -0.54
TRIM47-203ENST00000586495 NAGKQ9UJ70 344 aa11.66□□□□□ -0.54
TRIM47-203ENST00000586495 DYNC1H1Q14204 4646 aaKnown RBP11.66□□□□□ -0.54
TRIM47-203ENST00000586495 CDC34P49427 236 aaPredicted RBP11.65□□□□□ -0.54
TRIM47-203ENST00000586495 SPATA12Q7Z6I5 190 aa11.65□□□□□ -0.54
TRIM47-203ENST00000586495 OR2G3Q8NGZ4 309 aa11.65□□□□□ -0.54
TRIM47-203ENST00000586495 MED28Q9H204 178 aa11.65□□□□□ -0.54
TRIM47-203ENST00000586495 TREM1Q9NP99 234 aa11.65□□□□□ -0.54
TRIM47-203ENST00000586495 PCLOQ9Y6V0 5065 aa11.65□□□□□ -0.54
TRIM47-203ENST00000586495 SERTM2A0A1B0GWG4 89 aa11.64□□□□□ -0.55
TRIM47-203ENST00000586495 HMGB3O15347 200 aaKnown RBP11.64□□□□□ -0.55
TRIM47-203ENST00000586495 NXPH4O95158 308 aa11.64□□□□□ -0.55
TRIM47-203ENST00000586495 PTTG1O95997 202 aa11.64□□□□□ -0.55
TRIM47-203ENST00000586495 SFTA3P0C7M3 94 aa11.64□□□□□ -0.55
TRIM47-203ENST00000586495 LYPD5Q6UWN5 251 aa11.64□□□□□ -0.55
TRIM47-203ENST00000586495 HSD17B11Q8NBQ5 300 aa11.64□□□□□ -0.55
TRIM47-203ENST00000586495 PCNPQ8WW12 178 aaKnown RBP11.64□□□□□ -0.55
TRIM47-203ENST00000586495 ZNF479Q96JC4 524 aa11.64□□□□□ -0.55
TRIM47-203ENST00000586495 AQP10Q96PS8 301 aa11.64□□□□□ -0.55
TRIM47-203ENST00000586495 NDFIP1Q9BT67 221 aa11.64□□□□□ -0.55
TRIM47-203ENST00000586495 PSMG3Q9BT73 122 aaPredicted RBP11.64□□□□□ -0.55
TRIM47-203ENST00000586495 M0R2P5 195 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 CDK2AP2O75956 126 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 MBP02144 154 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 ORM1P02763 201 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 STAG3L2P0CL84 134 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 STAG3L3P0CL85 134 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 ARL14EPLP0DKL9 152 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 SRIP30626 198 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 LINC00315P59091 139 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 SERF2P84101 59 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 KCNS1Q96KK3 526 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 SDF2L1Q9HCN8 221 aa11.63□□□□□ -0.55
TRIM47-203ENST00000586495 TRAV8-1A0A0A6YYK1 113 aa11.62□□□□□ -0.55
TRIM47-203ENST00000586495 TRAV4A0A0B4J268 109 aa11.62□□□□□ -0.55
TRIM47-203ENST00000586495 F6UZH7 168 aa11.62□□□□□ -0.55
TRIM47-203ENST00000586495 K7EQM0 130 aa11.62□□□□□ -0.55
TRIM47-203ENST00000586495 GNRH2O43555 120 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms