RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 RNASE4P34096 147 aaKnown RBP9.92□□□□□ -0.82
VMP1-203ENST00000586245 TAS2R60P59551 318 aa9.92□□□□□ -0.82
VMP1-203ENST00000586245 BTN1A1Q13410 526 aa9.92□□□□□ -0.82
VMP1-203ENST00000586245 KIR3DS1Q14943 382 aa9.92□□□□□ -0.82
VMP1-203ENST00000586245 TVP23CQ96ET8 276 aa9.92□□□□□ -0.82
VMP1-203ENST00000586245 C20orf144Q9BQM9 153 aa9.92□□□□□ -0.82
VMP1-203ENST00000586245 OVOL2Q9BRP0 275 aa9.92□□□□□ -0.82
VMP1-203ENST00000586245 NIPSNAP3BQ9BS92 247 aa9.92□□□□□ -0.82
VMP1-203ENST00000586245 TRAV12-3A0A0B4J271 114 aa9.91□□□□□ -0.82
VMP1-203ENST00000586245 RPL35P42766 123 aaKnown RBP9.91□□□□□ -0.82
VMP1-203ENST00000586245 CEBPGP53567 150 aa9.91□□□□□ -0.82
VMP1-203ENST00000586245 SMUG1Q53HV7 270 aa9.91□□□□□ -0.82
VMP1-203ENST00000586245 C1orf158Q8N1D5 194 aa9.91□□□□□ -0.82
VMP1-203ENST00000586245 TMEM256Q8N2U0 113 aa9.91□□□□□ -0.82
VMP1-203ENST00000586245 OR11H2Q8NH07 326 aa9.91□□□□□ -0.82
VMP1-203ENST00000586245 DERL1Q9BUN8 251 aa9.91□□□□□ -0.82
VMP1-203ENST00000586245 LTAP01374 205 aa9.9□□□□□ -0.82
VMP1-203ENST00000586245 PRR9Q5T870 116 aa9.9□□□□□ -0.82
VMP1-203ENST00000586245 BAGE2Q86Y30 109 aa9.9□□□□□ -0.82
VMP1-203ENST00000586245 C8orf49Q96NF6 230 aa9.9□□□□□ -0.82
VMP1-203ENST00000586245 LINC01587Q99440 93 aa9.9□□□□□ -0.82
VMP1-203ENST00000586245 SMDT1Q9H4I9 107 aa9.9□□□□□ -0.82
VMP1-203ENST00000586245 HUWE1Q7Z6Z7 4374 aaKnown RBP9.89□□□□□ -0.83
VMP1-203ENST00000586245 TRAV21A0A0B4J279 112 aa9.89□□□□□ -0.83
VMP1-203ENST00000586245 RAB19A4D1S5 217 aa9.89□□□□□ -0.83
VMP1-203ENST00000586245 H7BYZ3 331 aa9.89□□□□□ -0.83
VMP1-203ENST00000586245 SRP19P09132 144 aaKnown RBP9.89□□□□□ -0.83
VMP1-203ENST00000586245 RBMY1A1P0DJD3 496 aaKnown RBP9.89□□□□□ -0.83
VMP1-203ENST00000586245 RBMY1CP0DJD4 496 aa9.89□□□□□ -0.83
VMP1-203ENST00000586245 RBMY1FQ15415 496 aaKnown RBP9.89□□□□□ -0.83
VMP1-203ENST00000586245 ZNF674Q2M3X9 581 aa9.89□□□□□ -0.83
VMP1-203ENST00000586245 ZNF705AQ6ZN79 300 aaPredicted RBP9.89□□□□□ -0.83
VMP1-203ENST00000586245 PARLQ9H300 379 aa9.89□□□□□ -0.83
VMP1-203ENST00000586245 SMIM9A6NGZ8 99 aa9.88□□□□□ -0.83
VMP1-203ENST00000586245 ZNF324O75467 553 aaPredicted RBP9.88□□□□□ -0.83
VMP1-203ENST00000586245 GCGP01275 180 aa9.88□□□□□ -0.83
VMP1-203ENST00000586245 GNG4P50150 75 aa9.88□□□□□ -0.83
VMP1-203ENST00000586245 CENPWQ5EE01 88 aa9.88□□□□□ -0.83
VMP1-203ENST00000586245 Q6AWC8 147 aa9.88□□□□□ -0.83
VMP1-203ENST00000586245 TMEM183AQ8IXX5 376 aa9.88□□□□□ -0.83
VMP1-203ENST00000586245 NEU1Q99519 415 aa9.88□□□□□ -0.83
VMP1-203ENST00000586245 MIFP14174 115 aa9.87□□□□□ -0.83
VMP1-203ENST00000586245 HTN1P15515 57 aa9.87□□□□□ -0.83
VMP1-203ENST00000586245 SRSF3P84103 164 aaKnown RBP9.87□□□□□ -0.83
VMP1-203ENST00000586245 RRN3P1Q2M238 152 aa9.87□□□□□ -0.83
VMP1-203ENST00000586245 COX8CQ7Z4L0 72 aa9.87□□□□□ -0.83
VMP1-203ENST00000586245 NHLRC2Q8NBF2 726 aa9.87□□□□□ -0.83
VMP1-203ENST00000586245 SMIM12Q96EX1 92 aa9.87□□□□□ -0.83
VMP1-203ENST00000586245 PYGO2Q9BRQ0 406 aa9.87□□□□□ -0.83
VMP1-203ENST00000586245 FABP5P3A8MUU1 101 aa9.86□□□□□ -0.83
VMP1-203ENST00000586245 ZNF705GA8MUZ8 300 aaPredicted RBP9.86□□□□□ -0.83
VMP1-203ENST00000586245 PFN1P07737 140 aaKnown RBP9.86□□□□□ -0.83
VMP1-203ENST00000586245 MGST1P10620 155 aaKnown RBP9.86□□□□□ -0.83
VMP1-203ENST00000586245 ZNF80P51504 273 aaPredicted RBP9.86□□□□□ -0.83
VMP1-203ENST00000586245 FAM159AQ6UWV7 190 aa9.86□□□□□ -0.83
VMP1-203ENST00000586245 ZC2HC1AQ96GY0 325 aa9.86□□□□□ -0.83
VMP1-203ENST00000586245 MLST8Q9BVC4 326 aa9.86□□□□□ -0.83
VMP1-203ENST00000586245 X6R8D5 127 aa9.86□□□□□ -0.83
VMP1-203ENST00000586245 IGHV1OR15-1A0A075B7D0 117 aa9.85□□□□□ -0.83
VMP1-203ENST00000586245 ZNF727A8MUV8 499 aa9.85□□□□□ -0.83
VMP1-203ENST00000586245 C9JCJ5 164 aa9.85□□□□□ -0.83
VMP1-203ENST00000586245 C9JQL5 133 aa9.85□□□□□ -0.83
VMP1-203ENST00000586245 FAM74A3Q4VXF1 159 aa9.85□□□□□ -0.83
VMP1-203ENST00000586245 FAM162BQ5T6X4 162 aa9.85□□□□□ -0.83
VMP1-203ENST00000586245 SMIM7Q9BQ49 75 aa9.85□□□□□ -0.83
VMP1-203ENST00000586245 LINC00467Q9BRT7 94 aa9.85□□□□□ -0.83
VMP1-203ENST00000586245 BIN3Q9NQY0 253 aa9.85□□□□□ -0.83
VMP1-203ENST00000586245 NAGKQ9UJ70 344 aa9.85□□□□□ -0.83
VMP1-203ENST00000586245 U3KQK5 164 aa9.85□□□□□ -0.83
VMP1-203ENST00000586245 TRBV20OR9-2A0A075B6H5 130 aa9.84□□□□□ -0.83
VMP1-203ENST00000586245 IGHV4-28A0A0C4DH34 117 aa9.84□□□□□ -0.83
VMP1-203ENST00000586245 LINC00862A6NCI5 91 aa9.84□□□□□ -0.83
VMP1-203ENST00000586245 CBY3A6NI87 242 aa9.84□□□□□ -0.83
VMP1-203ENST00000586245 MUC21Q5SSG8 566 aa9.84□□□□□ -0.83
VMP1-203ENST00000586245 PRR27Q6MZM9 219 aa9.84□□□□□ -0.83
VMP1-203ENST00000586245 UQCC3Q6UW78 93 aa9.84□□□□□ -0.83
VMP1-203ENST00000586245 Q6ZQT7 251 aa9.84□□□□□ -0.83
VMP1-203ENST00000586245 COMMD7Q86VX2 200 aa9.84□□□□□ -0.83
VMP1-203ENST00000586245 EIF4E3Q8N5X7 224 aaKnown RBP9.84□□□□□ -0.83
VMP1-203ENST00000586245 NBEAL2Q6ZNJ1 2754 aa9.83□□□□□ -0.84
VMP1-203ENST00000586245 TMEM189A5PLL7 270 aa9.83□□□□□ -0.84
VMP1-203ENST00000586245 SH2D1AO60880 128 aa9.83□□□□□ -0.84
VMP1-203ENST00000586245 IGLV2-8P01709 118 aa9.83□□□□□ -0.84
VMP1-203ENST00000586245 ANXA2RQ3ZCQ2 193 aa9.83□□□□□ -0.84
VMP1-203ENST00000586245 SOHLH1Q5JUK2 328 aa9.83□□□□□ -0.84
VMP1-203ENST00000586245 ZNF493Q6ZR52 646 aa9.83□□□□□ -0.84
VMP1-203ENST00000586245 Q8NAQ8 132 aa9.83□□□□□ -0.84
VMP1-203ENST00000586245 C16orf74Q96GX8 76 aa9.83□□□□□ -0.84
VMP1-203ENST00000586245 KCNS1Q96KK3 526 aa9.83□□□□□ -0.84
VMP1-203ENST00000586245 SDF2L1Q9HCN8 221 aa9.83□□□□□ -0.84
VMP1-203ENST00000586245 TRGV11A0A075B6L2 103 aa9.82□□□□□ -0.84
VMP1-203ENST00000586245 PGPEP1LA6NFU8 196 aa9.82□□□□□ -0.84
VMP1-203ENST00000586245 ORM1P02763 201 aa9.82□□□□□ -0.84
VMP1-203ENST00000586245 PRM2P04554 102 aa9.82□□□□□ -0.84
VMP1-203ENST00000586245 AZU1P20160 251 aa9.82□□□□□ -0.84
VMP1-203ENST00000586245 CRIP1P50238 77 aa9.82□□□□□ -0.84
VMP1-203ENST00000586245 TMEM263Q8WUH6 116 aaKnown RBP9.82□□□□□ -0.84
VMP1-203ENST00000586245 DAZAP1Q96EP5 407 aaKnown RBP9.82□□□□□ -0.84
VMP1-203ENST00000586245 C11orf68Q9H3H3 251 aaKnown RBP9.82□□□□□ -0.84
VMP1-203ENST00000586245 LY96Q9Y6Y9 160 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms