RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 ALPK2Q86TB3 2170 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 DSCAMO60469 2012 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 PRSS46E5RG02 174 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 SLC25A20O43772 301 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 FAM27E3Q08E93 113 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 RIGQ13278 110 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 TWIST1Q15672 202 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 KRTAP27-1Q3LI81 207 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 SLC25A48Q6ZT89 311 aaKnown RBP7.85□□□□□ -1.15
ZNF540-203ENST00000586134 LINC00596Q86U02 117 aa7.85□□□□□ -1.15
ZNF540-203ENST00000586134 AMMECR1Q9Y4X0 333 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-203ENST00000586134 MTORP42345 2549 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 SRRM4A7MD48 611 aaKnown RBP7.84□□□□□ -1.15
ZNF540-203ENST00000586134 DEFB108AA8MXU0 73 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 TIMM23O14925 209 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 EFNA2O43921 213 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 UBE2D1P51668 147 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 SRSF2Q01130 221 aaKnown RBP7.84□□□□□ -1.15
ZNF540-203ENST00000586134 ZNF415Q09FC8 603 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 DEFB113Q30KQ7 82 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 Q5XG85 94 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 HRCT1Q6UXD1 115 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 C20orf204Q6ZNR8 217 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 MIR17HGQ75NE6 70 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 AMN1Q8IY45 258 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 ZNF503Q96F45 646 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 DPH3Q96FX2 82 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 PGLYRP4Q96LB8 373 aa7.84□□□□□ -1.15
ZNF540-203ENST00000586134 WI2-2373I1.2A0A1W2PRP0 233 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 RBAKDNA6NC62 111 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 H3BVH4 76 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 PEX7O00628 323 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 DPM2O94777 84 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 P01737 135 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 COX7CP15954 63 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 LOXP28300 417 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-203ENST00000586134 EBI3Q14213 229 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 RSPO1Q2MKA7 263 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-203ENST00000586134 Q8N1Y9 231 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 POM121L12Q8N7R1 296 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 SPTSSAQ969W0 71 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 DKK2Q9UBU2 259 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 FLNAP21333 2647 aaKnown RBP7.83□□□□□ -1.16
ZNF540-203ENST00000586134 IGHV3OR15-7A0A075B7D8 119 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 IGKV3D-15A0A087WSY6 115 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 C5orf63A6NC05 138 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 TCL1BO95988 128 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 CD24P25063 80 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 HLA-DMBP28068 263 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 ZNF137PP52743 207 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 FGF12P61328 243 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 PAX8Q06710 450 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 C4orf26Q17RF5 130 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 C1orf43Q9BWL3 253 aa7.83□□□□□ -1.16
ZNF540-203ENST00000586134 MAP1AP78559 2803 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-203ENST00000586134 A0A1W2PPR1 153 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 C19orf71A6NCJ1 209 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 LINC01549A6NIU2 74 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 M0R135 149 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 OVOL1O14753 267 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 FCER1GP30273 86 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 ZFP2Q6ZN57 461 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 CXorf67Q86X51 503 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-203ENST00000586134 SSMEM1Q8WWF3 244 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 ZNF799Q96GE5 643 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 MRPL20Q9BYC9 149 aaKnown RBP7.82□□□□□ -1.16
ZNF540-203ENST00000586134 SRXN1Q9BYN0 137 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 JPT2Q9H910 190 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 METRNQ9UJH8 293 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 U3KQK5 164 aa7.82□□□□□ -1.16
ZNF540-203ENST00000586134 SETD2Q9BYW2 2564 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-203ENST00000586134 NCBP2LA6PVI3 153 aaKnown RBP7.81□□□□□ -1.16
ZNF540-203ENST00000586134 LGALS9O00182 355 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 TRACP01848 142 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 IFI27P40305 119 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-203ENST00000586134 DTX2Q86UW9 622 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 DRAM1Q8N682 238 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 C8orf31Q8N9H6 132 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 TMSB15BA0A087X1C1 80 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 FAM236AA0A1B0GUQ0 79 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 A0A1B0GUT8 65 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 FAM236BA0A1B0GV22 79 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 LINC01548A6NM66 108 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 TIMM8AO60220 97 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-203ENST00000586134 CD3EP07766 207 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 CDAP32320 146 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 Q6ZT83 130 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 LINC00477Q96M19 166 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 MLST8Q9BVC4 326 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 AAMDCQ9H7C9 122 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 ACANP16112 2415 aa7.81□□□□□ -1.16
ZNF540-203ENST00000586134 PRR14LQ5THK1 2151 aa7.8□□□□□ -1.16
ZNF540-203ENST00000586134 MZT1Q08AG7 82 aa7.8□□□□□ -1.16
ZNF540-203ENST00000586134 ZC2HC1BQ5TFG8 222 aa7.8□□□□□ -1.16
ZNF540-203ENST00000586134 C11orf53Q8IXP5 236 aa7.8□□□□□ -1.16
ZNF540-203ENST00000586134 PLPPR2Q96GM1 343 aa7.8□□□□□ -1.16
ZNF540-203ENST00000586134 NABP2Q9BQ15 211 aa7.8□□□□□ -1.16
ZNF540-203ENST00000586134 EMC6Q9BV81 110 aa7.8□□□□□ -1.16
ZNF540-203ENST00000586134 TTTY13Q9BZ97 58 aa7.8□□□□□ -1.16
ZNF540-203ENST00000586134 ROS1P08922 2347 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms