RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 SLC25A2Q9BXI2 301 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 OR51M1Q9H341 326 aa8.05□□□□□ -1.12
LIG3-207ENST00000586119 TIMM8BQ9Y5J9 83 aaPredicted RBP8.05□□□□□ -1.12
LIG3-207ENST00000586119 GAGE12BA1L429 117 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 J3KRW8 73 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 GAGE7O76087 117 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 GAGE12FP0CL80 117 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 GAGE12GP0CL81 117 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 GAGE12IP0CL82 117 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 IGLC2P0DOY2 106 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 RAB14P61106 215 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 PDE6HQ13956 83 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 FAM122CQ6P4D5 195 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 LCN15Q6UWW0 184 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 LRRC20Q8TCA0 184 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 RAB24Q969Q5 203 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 PHYHIPLQ96FC7 376 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 C16orf74Q96GX8 76 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 SLC50A1Q9BRV3 221 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 PAXXQ9BUH6 204 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 MED9Q9NWA0 146 aa8.04□□□□□ -1.12
LIG3-207ENST00000586119 CTXND1A0A1B0GTU2 59 aa8.03□□□□□ -1.12
LIG3-207ENST00000586119 STAG3L2P0CL84 134 aa8.03□□□□□ -1.12
LIG3-207ENST00000586119 STAG3L3P0CL85 134 aa8.03□□□□□ -1.12
LIG3-207ENST00000586119 CDKN1BP46527 198 aa8.03□□□□□ -1.12
LIG3-207ENST00000586119 TMEM256Q8N2U0 113 aa8.03□□□□□ -1.12
LIG3-207ENST00000586119 LINC00612Q8N6U2 182 aa8.03□□□□□ -1.12
LIG3-207ENST00000586119 HERC1Q15751 4861 aa8.03□□□□□ -1.12
LIG3-207ENST00000586119 FAT1Q14517 4588 aa8.02□□□□□ -1.13
LIG3-207ENST00000586119 TRBV19A0A075B6N1 114 aa8.02□□□□□ -1.13
LIG3-207ENST00000586119 H3BQ15 152 aa8.02□□□□□ -1.13
LIG3-207ENST00000586119 SLC17A3O00476 420 aa8.02□□□□□ -1.13
LIG3-207ENST00000586119 OR7C2O60412 319 aa8.02□□□□□ -1.13
LIG3-207ENST00000586119 CXorf1O96002 111 aa8.02□□□□□ -1.13
LIG3-207ENST00000586119 NBEAP1P0C6P0 100 aa8.02□□□□□ -1.13
LIG3-207ENST00000586119 GFI1BQ5VTD9 330 aa8.02□□□□□ -1.13
LIG3-207ENST00000586119 RXFP4Q8TDU9 374 aa8.02□□□□□ -1.13
LIG3-207ENST00000586119 TMEM263Q8WUH6 116 aaKnown RBP8.02□□□□□ -1.13
LIG3-207ENST00000586119 TMED6Q8WW62 240 aa8.02□□□□□ -1.13
LIG3-207ENST00000586119 SAT2Q96F10 170 aaPredicted RBP8.02□□□□□ -1.13
LIG3-207ENST00000586119 ZNF331Q9NQX6 463 aaPredicted RBP8.02□□□□□ -1.13
LIG3-207ENST00000586119 ZNF586Q9NXT0 402 aa8.02□□□□□ -1.13
LIG3-207ENST00000586119 CT45A10P0DMU9 189 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 PYYP10082 97 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 SULT1A2P50226 295 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 UBE2L3P68036 154 aaKnown RBP8.01□□□□□ -1.13
LIG3-207ENST00000586119 ZNF493Q6ZR52 646 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 LYPD1Q8N2G4 141 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 MBD3L1Q8WWY6 194 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 FXYD5Q96DB9 178 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 MRPL53Q96EL3 112 aaKnown RBP8.01□□□□□ -1.13
LIG3-207ENST00000586119 ZNF503Q96F45 646 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 Q9H3A6 140 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 TMEM167BQ9NRX6 74 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 PRELID1Q9Y255 219 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 TNFRSF18Q9Y5U5 241 aa8.01□□□□□ -1.13
LIG3-207ENST00000586119 TRAV12-3A0A0B4J271 114 aa8□□□□□ -1.13
LIG3-207ENST00000586119 H7BYZ3 331 aa8□□□□□ -1.13
LIG3-207ENST00000586119 ARL14EPLP0DKL9 152 aa8□□□□□ -1.13
LIG3-207ENST00000586119 ZNF726P1Q15940 193 aa8□□□□□ -1.13
LIG3-207ENST00000586119 TOR2AQ5JU69 321 aa8□□□□□ -1.13
LIG3-207ENST00000586119 Q6ZTI0 123 aa8□□□□□ -1.13
LIG3-207ENST00000586119 VSIG2Q96IQ7 327 aa8□□□□□ -1.13
LIG3-207ENST00000586119 TMPRSS5Q9H3S3 457 aa8□□□□□ -1.13
LIG3-207ENST00000586119 AAMDCQ9H7C9 122 aa8□□□□□ -1.13
LIG3-207ENST00000586119 MAP1LC3B2A6NCE7 125 aa7.99□□□□□ -1.13
LIG3-207ENST00000586119 TEX46H3BTG2 121 aa7.99□□□□□ -1.13
LIG3-207ENST00000586119 NDUFB4O95168 129 aa7.99□□□□□ -1.13
LIG3-207ENST00000586119 GCHFRP30047 84 aa7.99□□□□□ -1.13
LIG3-207ENST00000586119 OR10J6PQ8NGY7 276 aa7.99□□□□□ -1.13
LIG3-207ENST00000586119 FAM213BQ8TBF2 198 aa7.99□□□□□ -1.13
LIG3-207ENST00000586119 UPK3BQ9BT76 320 aa7.99□□□□□ -1.13
LIG3-207ENST00000586119 MAP1LC3BQ9GZQ8 125 aa7.99□□□□□ -1.13
LIG3-207ENST00000586119 MRPS16Q9Y3D3 137 aaKnown RBP7.99□□□□□ -1.13
LIG3-207ENST00000586119 A0A096LPF7 62 aa7.98□□□□□ -1.13
LIG3-207ENST00000586119 TRAV1-1A0A0B4J248 108 aa7.98□□□□□ -1.13
LIG3-207ENST00000586119 HMGB3O15347 200 aaKnown RBP7.98□□□□□ -1.13
LIG3-207ENST00000586119 H2AFB1P0C5Y9 115 aa7.98□□□□□ -1.13
LIG3-207ENST00000586119 OR10J4P0C629 311 aa7.98□□□□□ -1.13
LIG3-207ENST00000586119 LINC00315P59091 139 aa7.98□□□□□ -1.13
LIG3-207ENST00000586119 ERCC8Q13216 396 aa7.98□□□□□ -1.13
LIG3-207ENST00000586119 FAM74A1Q5RGS3 127 aa7.98□□□□□ -1.13
LIG3-207ENST00000586119 Q6ZRN7 208 aaPredicted RBP7.98□□□□□ -1.13
LIG3-207ENST00000586119 COMMD7Q86VX2 200 aa7.98□□□□□ -1.13
LIG3-207ENST00000586119 ARL6IP6Q8N6S5 226 aa7.98□□□□□ -1.13
LIG3-207ENST00000586119 BLNKQ8WV28 456 aa7.98□□□□□ -1.13
LIG3-207ENST00000586119 A0A1W2PRE2 83 aa7.97□□□□□ -1.13
LIG3-207ENST00000586119 SNURFLB1AK76 121 aa7.97□□□□□ -1.13
LIG3-207ENST00000586119 KRBOX1C9JBD0 128 aa7.97□□□□□ -1.13
LIG3-207ENST00000586119 BTF3P20290 206 aaKnown RBP7.97□□□□□ -1.13
LIG3-207ENST00000586119 FHITP49789 147 aa7.97□□□□□ -1.13
LIG3-207ENST00000586119 PPT1P50897 306 aa7.97□□□□□ -1.13
LIG3-207ENST00000586119 BLOC1S1P78537 153 aa7.97□□□□□ -1.13
LIG3-207ENST00000586119 Q6ZQT7 251 aa7.97□□□□□ -1.13
LIG3-207ENST00000586119 SFT2D1Q8WV19 159 aa7.97□□□□□ -1.13
LIG3-207ENST00000586119 C20orf144Q9BQM9 153 aa7.97□□□□□ -1.13
LIG3-207ENST00000586119 NKX6-2Q9C056 277 aaPredicted RBP7.97□□□□□ -1.13
LIG3-207ENST00000586119 OTORQ9NRC9 128 aa7.97□□□□□ -1.13
LIG3-207ENST00000586119 GSN-AS1Q9NRJ2 163 aa7.97□□□□□ -1.13
LIG3-207ENST00000586119 ARL2-SNX15V9GYD0 113 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms