RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 PPP1R1CQ8WVI7 109 aa14.07□□□□□ -0.16
TOP3A-219ENST00000584887 SMIM3Q9BZL3 60 aa14.07□□□□□ -0.16
TOP3A-219ENST00000584887 RYR1P21817 5038 aa14.06□□□□□ -0.16
TOP3A-219ENST00000584887 SSNA1O43805 119 aa14.06□□□□□ -0.16
TOP3A-219ENST00000584887 CDK2AP2O75956 126 aa14.06□□□□□ -0.16
TOP3A-219ENST00000584887 H2BFSP57053 126 aa14.06□□□□□ -0.16
TOP3A-219ENST00000584887 C8orf49Q96NF6 230 aa14.06□□□□□ -0.16
TOP3A-219ENST00000584887 NXPH4O95158 308 aa14.05□□□□□ -0.16
TOP3A-219ENST00000584887 IFITM3Q01628 133 aa14.05□□□□□ -0.16
TOP3A-219ENST00000584887 MAPKAPK5-AS1Q8N8E1 139 aa14.05□□□□□ -0.16
TOP3A-219ENST00000584887 SCGB1C1Q8TD33 95 aa14.05□□□□□ -0.16
TOP3A-219ENST00000584887 HSPB11Q9Y547 144 aa14.05□□□□□ -0.16
TOP3A-219ENST00000584887 SIVA1O15304 175 aa14.04□□□□□ -0.16
TOP3A-219ENST00000584887 EIF3GO75821 320 aaKnown RBP eCLIP14.04□□□□□ -0.16
TOP3A-219ENST00000584887 IFNA5P01569 189 aa14.04□□□□□ -0.16
TOP3A-219ENST00000584887 LINC00315P59091 139 aa14.04□□□□□ -0.16
TOP3A-219ENST00000584887 KHDC3LQ587J8 217 aa14.04□□□□□ -0.16
TOP3A-219ENST00000584887 HYLS1Q96M11 299 aa14.04□□□□□ -0.16
TOP3A-219ENST00000584887 PRO0255Q9UI72 69 aa14.04□□□□□ -0.16
TOP3A-219ENST00000584887 RPH3ALQ9UNE2 315 aa14.04□□□□□ -0.16
TOP3A-219ENST00000584887 TRBV7-9A0A0J9YWB2 115 aa14.03□□□□□ -0.16
TOP3A-219ENST00000584887 PET100P0DJ07 73 aa14.03□□□□□ -0.16
TOP3A-219ENST00000584887 TAS2R45P59539 299 aa14.03□□□□□ -0.16
TOP3A-219ENST00000584887 KRTAP10-2P60368 255 aa14.03□□□□□ -0.16
TOP3A-219ENST00000584887 ZNF266Q14584 549 aa14.03□□□□□ -0.16
TOP3A-219ENST00000584887 NAGKQ9UJ70 344 aa14.03□□□□□ -0.16
TOP3A-219ENST00000584887 TRGV4A0A0C4DH28 118 aa14.02□□□□□ -0.17
TOP3A-219ENST00000584887 RBAKDNA6NC62 111 aa14.02□□□□□ -0.17
TOP3A-219ENST00000584887 MPC2O95563 127 aa14.02□□□□□ -0.17
TOP3A-219ENST00000584887 TMEM183BQ1AE95 376 aa14.02□□□□□ -0.17
TOP3A-219ENST00000584887 TMEM183AQ8IXX5 376 aa14.02□□□□□ -0.17
TOP3A-219ENST00000584887 LYPD1Q8N2G4 141 aa14.02□□□□□ -0.17
TOP3A-219ENST00000584887 HHLA3Q9XRX5 114 aa14.02□□□□□ -0.17
TOP3A-219ENST00000584887 RPL12P30050 165 aaKnown RBP14.01□□□□□ -0.17
TOP3A-219ENST00000584887 CRYBA4P53673 196 aa14.01□□□□□ -0.17
TOP3A-219ENST00000584887 SLAQ13239 276 aa14.01□□□□□ -0.17
TOP3A-219ENST00000584887 MDFICQ9P1T7 246 aa14.01□□□□□ -0.17
TOP3A-219ENST00000584887 MBD2Q9UBB5 411 aa14.01□□□□□ -0.17
TOP3A-219ENST00000584887 DIRC3C9JPN6 131 aa14□□□□□ -0.17
TOP3A-219ENST00000584887 SFTA3P0C7M3 94 aa14□□□□□ -0.17
TOP3A-219ENST00000584887 BTF3P20290 206 aaKnown RBP14□□□□□ -0.17
TOP3A-219ENST00000584887 FHL2Q14192 279 aa14□□□□□ -0.17
TOP3A-219ENST00000584887 MRPL23Q16540 153 aaKnown RBP14□□□□□ -0.17
TOP3A-219ENST00000584887 FAM159AQ6UWV7 190 aa14□□□□□ -0.17
TOP3A-219ENST00000584887 CMTM2Q8TAZ6 248 aa14□□□□□ -0.17
TOP3A-219ENST00000584887 MARVELD1Q9BSK0 173 aa14□□□□□ -0.17
TOP3A-219ENST00000584887 TRGV11A0A075B6L2 103 aa13.99□□□□□ -0.17
TOP3A-219ENST00000584887 DEFA1P59665 94 aa13.99□□□□□ -0.17
TOP3A-219ENST00000584887 DEFA3P59666 94 aa13.99□□□□□ -0.17
TOP3A-219ENST00000584887 PTTG2Q9NZH5 202 aa13.99□□□□□ -0.17
TOP3A-219ENST00000584887 ABCA13Q86UQ4 5058 aa13.99□□□□□ -0.17
TOP3A-219ENST00000584887 Q6AWC8 147 aa13.98□□□□□ -0.17
TOP3A-219ENST00000584887 NEGR1Q7Z3B1 354 aa13.98□□□□□ -0.17
TOP3A-219ENST00000584887 PCNPQ8WW12 178 aaKnown RBP13.98□□□□□ -0.17
TOP3A-219ENST00000584887 ZNF479Q96JC4 524 aa13.98□□□□□ -0.17
TOP3A-219ENST00000584887 OTORQ9NRC9 128 aa13.98□□□□□ -0.17
TOP3A-219ENST00000584887 PGPA6NDG6 321 aa13.97□□□□□ -0.17
TOP3A-219ENST00000584887 SRIP30626 198 aa13.97□□□□□ -0.17
TOP3A-219ENST00000584887 ACOT6Q3I5F7 207 aaPredicted RBP13.97□□□□□ -0.17
TOP3A-219ENST00000584887 LYPD5Q6UWN5 251 aa13.97□□□□□ -0.17
TOP3A-219ENST00000584887 GOLT1AQ6ZVE7 132 aa13.97□□□□□ -0.17
TOP3A-219ENST00000584887 SPXQ9BT56 116 aa13.97□□□□□ -0.17
TOP3A-219ENST00000584887 WFDC1Q9HC57 220 aa13.97□□□□□ -0.17
TOP3A-219ENST00000584887 LENEPQ9Y5L5 61 aa13.97□□□□□ -0.17
TOP3A-219ENST00000584887 A0A1W2PPV4 95 aa13.96□□□□□ -0.17
TOP3A-219ENST00000584887 GYPEP15421 78 aa13.96□□□□□ -0.17
TOP3A-219ENST00000584887 FAM74A1Q5RGS3 127 aa13.96□□□□□ -0.17
TOP3A-219ENST00000584887 Q6ZRN7 208 aaPredicted RBP13.96□□□□□ -0.17
TOP3A-219ENST00000584887 TNFRSF18Q9Y5U5 241 aa13.96□□□□□ -0.17
TOP3A-219ENST00000584887 HSPG2P98160 4391 aa13.96□□□□□ -0.17
TOP3A-219ENST00000584887 F6UZH7 168 aa13.95□□□□□ -0.18
TOP3A-219ENST00000584887 HMGB3O15347 200 aaKnown RBP13.95□□□□□ -0.18
TOP3A-219ENST00000584887 RAB2AP61019 212 aa13.95□□□□□ -0.18
TOP3A-219ENST00000584887 OR10G4Q8NGN3 311 aa13.95□□□□□ -0.18
TOP3A-219ENST00000584887 A6NHS1 94 aa13.94□□□□□ -0.18
TOP3A-219ENST00000584887 K7EQD1 137 aa13.94□□□□□ -0.18
TOP3A-219ENST00000584887 EREGO14944 169 aa13.94□□□□□ -0.18
TOP3A-219ENST00000584887 FUSP35637 526 aaKnown RBP eCLIP13.94□□□□□ -0.18
TOP3A-219ENST00000584887 TMED6Q8WW62 240 aa13.94□□□□□ -0.18
TOP3A-219ENST00000584887 RASL10AQ92737 203 aa13.94□□□□□ -0.18
TOP3A-219ENST00000584887 SCRT2Q9NQ03 307 aa13.94□□□□□ -0.18
TOP3A-219ENST00000584887 TRAV8-1A0A0A6YYK1 113 aa13.93□□□□□ -0.18
TOP3A-219ENST00000584887 GNRH2O43555 120 aa13.93□□□□□ -0.18
TOP3A-219ENST00000584887 ERVFC1-1P60608 527 aa13.93□□□□□ -0.18
TOP3A-219ENST00000584887 GNG5P63218 68 aa13.93□□□□□ -0.18
TOP3A-219ENST00000584887 PQLC2Q6ZP29 291 aa13.93□□□□□ -0.18
TOP3A-219ENST00000584887 Q8N1X5 172 aa13.93□□□□□ -0.18
TOP3A-219ENST00000584887 LY96Q9Y6Y9 160 aa13.93□□□□□ -0.18
TOP3A-219ENST00000584887 LRP1BQ9NZR2 4599 aa13.92□□□□□ -0.18
TOP3A-219ENST00000584887 TRAV9-2A0A087WT02 112 aa13.92□□□□□ -0.18
TOP3A-219ENST00000584887 WFDC10BQ8IUB3 73 aa13.92□□□□□ -0.18
TOP3A-219ENST00000584887 OR4C5Q8NGB2 326 aa13.92□□□□□ -0.18
TOP3A-219ENST00000584887 TREM1Q9NP99 234 aa13.92□□□□□ -0.18
TOP3A-219ENST00000584887 TRAV4A0A0B4J268 109 aa13.91□□□□□ -0.18
TOP3A-219ENST00000584887 TRAV21A0A0B4J279 112 aa13.91□□□□□ -0.18
TOP3A-219ENST00000584887 M0R2P5 195 aa13.91□□□□□ -0.18
TOP3A-219ENST00000584887 ORM1P02763 201 aa13.91□□□□□ -0.18
TOP3A-219ENST00000584887 NFE4Q86UQ8 179 aa13.91□□□□□ -0.18
TOP3A-219ENST00000584887 IQCF2Q8IXL9 164 aa13.91□□□□□ -0.18
TOP3A-219ENST00000584887 OR10G9Q8NGN4 311 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms