RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.12□□□□□ -1.11
CDH8-211ENST00000584337 LOC107984640A0A0U1RRK4 108 aa8.12□□□□□ -1.11
CDH8-211ENST00000584337 TNFRSF13BO14836 293 aaPredicted RBP8.12□□□□□ -1.11
CDH8-211ENST00000584337 UQCRQO14949 82 aa8.12□□□□□ -1.11
CDH8-211ENST00000584337 CFC1BP0CG36 223 aa8.12□□□□□ -1.11
CDH8-211ENST00000584337 CFC1P0CG37 223 aa8.12□□□□□ -1.11
CDH8-211ENST00000584337 TRPT1Q86TN4 253 aaKnown RBP8.12□□□□□ -1.11
CDH8-211ENST00000584337 PIEZO1Q92508 2521 aa8.12□□□□□ -1.11
CDH8-211ENST00000584337 TRACP01848 142 aa8.12□□□□□ -1.11
CDH8-211ENST00000584337 UBE2D3P61077 147 aa8.12□□□□□ -1.11
CDH8-211ENST00000584337 UBE2D2P62837 147 aa8.12□□□□□ -1.11
CDH8-211ENST00000584337 LAMA2P24043 3122 aaKnown RBP8.12□□□□□ -1.11
CDH8-211ENST00000584337 ZGRF1Q86YA3 2104 aa8.12□□□□□ -1.11
CDH8-211ENST00000584337 F5H768 121 aa8.12□□□□□ -1.11
CDH8-211ENST00000584337 S100A4P26447 101 aaKnown RBP8.12□□□□□ -1.11
CDH8-211ENST00000584337 C3orf22Q8N5N4 141 aa8.12□□□□□ -1.11
CDH8-211ENST00000584337 GATA1P15976 413 aaPredicted RBP8.12□□□□□ -1.11
CDH8-211ENST00000584337 RPUSD1Q9UJJ7 312 aaKnown RBP8.12□□□□□ -1.11
CDH8-211ENST00000584337 TRGV11A0A075B6L2 103 aa8.11□□□□□ -1.11
CDH8-211ENST00000584337 M0R2P5 195 aa8.11□□□□□ -1.11
CDH8-211ENST00000584337 WT1-ASQ06250 92 aa8.11□□□□□ -1.11
CDH8-211ENST00000584337 DSCAML1Q8TD84 2053 aa8.11□□□□□ -1.11
CDH8-211ENST00000584337 TRBV19A0A075B6N1 114 aa8.11□□□□□ -1.11
CDH8-211ENST00000584337 TEX49A0A1B0GTD5 131 aa8.11□□□□□ -1.11
CDH8-211ENST00000584337 WISP2O76076 250 aa8.11□□□□□ -1.11
CDH8-211ENST00000584337 TMEM14CQ9P0S9 112 aa8.11□□□□□ -1.11
CDH8-211ENST00000584337 MKI67P46013 3256 aaKnown RBP8.11□□□□□ -1.11
CDH8-211ENST00000584337 ZNF785A8K8V0 405 aa8.11□□□□□ -1.11
CDH8-211ENST00000584337 TIMM23O14925 209 aa8.11□□□□□ -1.11
CDH8-211ENST00000584337 TMEM167AQ8TBQ9 72 aa8.11□□□□□ -1.11
CDH8-211ENST00000584337 TRBV6-1A0A0K0K1D8 114 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 SS18L1O75177 396 aaPredicted RBP8.1□□□□□ -1.11
CDH8-211ENST00000584337 MDFICQ9P1T7 246 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 IGKV2-40A0A087WW87 121 aaPredicted RBP8.1□□□□□ -1.11
CDH8-211ENST00000584337 OOSP1A8MZH6 123 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 IGKV2D-40P01614 121 aaPredicted RBP8.1□□□□□ -1.11
CDH8-211ENST00000584337 COX6A1P12074 109 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 TMEM30BQ3MIR4 351 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 C17orf82Q86X59 251 aaPredicted RBP8.1□□□□□ -1.11
CDH8-211ENST00000584337 KLHL30-AS1Q8NEE0 82 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 IMMP1LQ96LU5 166 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 MGPP08493 103 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 CECR9P0C854 216 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 UBE2D1P51668 147 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 DLX6P56179 175 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 DTX2Q86UW9 622 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 RASL10AQ92737 203 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 MSRB1Q9NZV6 116 aa8.1□□□□□ -1.11
CDH8-211ENST00000584337 FREM1Q5H8C1 2179 aa8.09□□□□□ -1.11
CDH8-211ENST00000584337 TRBV10-2A0A0K0K1G8 114 aa8.09□□□□□ -1.11
CDH8-211ENST00000584337 NCKAP5O14513 1909 aa8.09□□□□□ -1.11
CDH8-211ENST00000584337 CCDC168Q8NDH2 2452 aa8.09□□□□□ -1.11
CDH8-211ENST00000584337 TRAV12-1A0A0B4J245 112 aa8.09□□□□□ -1.11
CDH8-211ENST00000584337 LINC01548A6NM66 108 aa8.09□□□□□ -1.11
CDH8-211ENST00000584337 DKK1O94907 266 aa8.09□□□□□ -1.11
CDH8-211ENST00000584337 IGHG4P01861 327 aa8.09□□□□□ -1.11
CDH8-211ENST00000584337 IL17RELQ6ZVW7 336 aa8.09□□□□□ -1.11
CDH8-211ENST00000584337 TTTY12Q9BZ98 90 aa8.09□□□□□ -1.11
CDH8-211ENST00000584337 REV3LO60673 3130 aa8.09□□□□□ -1.12
CDH8-211ENST00000584337 IGKV1D-37A0A075B6S9 117 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 TMEM219Q86XT9 240 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 FAM90A1Q86YD7 464 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 Q8TAT8 98 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 MRPL36Q9P0J6 103 aaKnown RBP8.08□□□□□ -1.12
CDH8-211ENST00000584337 SIGLEC9Q9Y336 463 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 IGF2RP11717 2491 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 IGKV1D-17A0A075B6S4 117 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 LGALS9O00182 355 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 EGR2P11161 476 aaPredicted RBP8.08□□□□□ -1.12
CDH8-211ENST00000584337 DUX3Q96PT4 197 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 CCL13Q99616 98 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 IGHV3-72A0A0B4J1Y9 119 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 ZNF474Q6S9Z5 364 aaPredicted RBP8.08□□□□□ -1.12
CDH8-211ENST00000584337 PLEKHB2Q96CS7 222 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 C2orf16Q68DN1 1984 aa8.08□□□□□ -1.12
CDH8-211ENST00000584337 SRRM5B3KS81 715 aa8.07□□□□□ -1.12
CDH8-211ENST00000584337 IGLC6P0CF74 106 aa8.07□□□□□ -1.12
CDH8-211ENST00000584337 C17orf77Q96MU5 243 aa8.07□□□□□ -1.12
CDH8-211ENST00000584337 PRR25Q96S07 402 aa8.07□□□□□ -1.12
CDH8-211ENST00000584337 DUX4L9Q6RFH8 374 aaPredicted RBP8.07□□□□□ -1.12
CDH8-211ENST00000584337 C1orf43Q9BWL3 253 aa8.07□□□□□ -1.12
CDH8-211ENST00000584337 K7EM74 188 aa8.07□□□□□ -1.12
CDH8-211ENST00000584337 COX7A1P24310 79 aa8.07□□□□□ -1.12
CDH8-211ENST00000584337 MRPL14Q6P1L8 145 aaKnown RBP8.07□□□□□ -1.12
CDH8-211ENST00000584337 C1orf162Q8NEQ5 155 aaPredicted RBP8.07□□□□□ -1.12
CDH8-211ENST00000584337 RNF125Q96EQ8 232 aa8.07□□□□□ -1.12
CDH8-211ENST00000584337 SHANK2-AS3Q9BTD1 123 aa8.07□□□□□ -1.12
CDH8-211ENST00000584337 RNF7Q9UBF6 113 aa8.07□□□□□ -1.12
CDH8-211ENST00000584337 LINC00527Q9UJ94 153 aa8.07□□□□□ -1.12
CDH8-211ENST00000584337 LAMA3Q16787 3333 aa8.06□□□□□ -1.12
CDH8-211ENST00000584337 CDX4O14627 284 aaPredicted RBP8.06□□□□□ -1.12
CDH8-211ENST00000584337 MRPS12O15235 138 aaKnown RBP8.06□□□□□ -1.12
CDH8-211ENST00000584337 IGLV2-11P01706 119 aa8.06□□□□□ -1.12
CDH8-211ENST00000584337 CRIP1P50238 77 aa8.06□□□□□ -1.12
CDH8-211ENST00000584337 CCL8P80075 99 aa8.06□□□□□ -1.12
CDH8-211ENST00000584337 IGF2-ASQ6U949 168 aa8.06□□□□□ -1.12
CDH8-211ENST00000584337 C2orf66Q6UXQ4 117 aa8.06□□□□□ -1.12
CDH8-211ENST00000584337 ATP5G1P05496 136 aa8.06□□□□□ -1.12
CDH8-211ENST00000584337 RPL11P62913 178 aaKnown RBP8.06□□□□□ -1.12
CDH8-211ENST00000584337 C11orf53Q8IXP5 236 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms