RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 OR7C2O60412 319 aa7.74□□□□□ -1.17
CCDC47-206ENST00000584112 IFNA5P01569 189 aa7.74□□□□□ -1.17
CCDC47-206ENST00000584112 CRISP2P16562 243 aa7.74□□□□□ -1.17
CCDC47-206ENST00000584112 RNASE4P34096 147 aaKnown RBP7.74□□□□□ -1.17
CCDC47-206ENST00000584112 CSN1S1P47710 185 aa7.74□□□□□ -1.17
CCDC47-206ENST00000584112 H2BFSP57053 126 aa7.74□□□□□ -1.17
CCDC47-206ENST00000584112 BTN1A1Q13410 526 aa7.74□□□□□ -1.17
CCDC47-206ENST00000584112 ANXA2RQ3ZCQ2 193 aa7.74□□□□□ -1.17
CCDC47-206ENST00000584112 FAM122CQ6P4D5 195 aa7.74□□□□□ -1.17
CCDC47-206ENST00000584112 SSX7Q7RTT5 188 aa7.74□□□□□ -1.17
CCDC47-206ENST00000584112 LINC00588Q9Y4M8 146 aa7.74□□□□□ -1.17
CCDC47-206ENST00000584112 TRGV2A0A075B6R0 118 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 IGKV2-40A0A087WW87 121 aaPredicted RBP7.73□□□□□ -1.17
CCDC47-206ENST00000584112 TRBV7-9A0A0J9YWB2 115 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 RGS13O14921 159 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 ZNF324O75467 553 aaPredicted RBP7.73□□□□□ -1.17
CCDC47-206ENST00000584112 MPC2O95563 127 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 IGKV2D-40P01614 121 aaPredicted RBP7.73□□□□□ -1.17
CCDC47-206ENST00000584112 OR10J4P0C629 311 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 TAS2R45P59539 299 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 KRTAP10-2P60368 255 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 CD300CQ08708 224 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 Q6ZTI0 123 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 SCGB1C1Q8TD33 95 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 FXYD5Q96DB9 178 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 ZNF492Q9P255 531 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 HSPB11Q9Y547 144 aa7.73□□□□□ -1.17
CCDC47-206ENST00000584112 TRGV1A0A0A0MS02 117 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 A0A0J9YY99 117 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 RBAKDNA6NC62 111 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 HOXA5P20719 270 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 RPL12P30050 165 aaKnown RBP7.72□□□□□ -1.17
CCDC47-206ENST00000584112 ZNF138P52744 262 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 UBE2L3P68036 154 aaKnown RBP7.72□□□□□ -1.17
CCDC47-206ENST00000584112 KHDC3LQ587J8 217 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 TTC32Q5I0X7 151 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 FFAR4Q5NUL3 377 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 IBA57Q5T440 356 aaKnown RBP7.72□□□□□ -1.17
CCDC47-206ENST00000584112 C6orf223Q8N319 242 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 ZFAND2AQ8N6M9 145 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 C11orf72Q8NBR9 251 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 PHYHIPLQ96FC7 376 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 VGLL1Q99990 258 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 TMPRSS5Q9H3S3 457 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 GSN-AS1Q9NRJ2 163 aa7.72□□□□□ -1.17
CCDC47-206ENST00000584112 ASIPP42127 132 aa7.71□□□□□ -1.18
CCDC47-206ENST00000584112 TCL1AP56279 114 aa7.71□□□□□ -1.18
CCDC47-206ENST00000584112 ARPC5LQ9BPX5 153 aa7.71□□□□□ -1.18
CCDC47-206ENST00000584112 Q9H3A6 140 aa7.71□□□□□ -1.18
CCDC47-206ENST00000584112 Q9H8V8 135 aa7.71□□□□□ -1.18
CCDC47-206ENST00000584112 FAT3Q8TDW7 4589 aa7.71□□□□□ -1.18
CCDC47-206ENST00000584112 IGHV1OR15-1A0A075B7D0 117 aa7.7□□□□□ -1.18
CCDC47-206ENST00000584112 SPINK4O60575 86 aa7.7□□□□□ -1.18
CCDC47-206ENST00000584112 RANP62826 216 aaKnown RBP7.7□□□□□ -1.18
CCDC47-206ENST00000584112 UPK3BQ9BT76 320 aa7.7□□□□□ -1.18
CCDC47-206ENST00000584112 SMIM3Q9BZL3 60 aa7.7□□□□□ -1.18
CCDC47-206ENST00000584112 MBD2Q9UBB5 411 aa7.7□□□□□ -1.18
CCDC47-206ENST00000584112 LENEPQ9Y5L5 61 aa7.7□□□□□ -1.18
CCDC47-206ENST00000584112 ZNF415Q09FC8 603 aa7.69□□□□□ -1.18
CCDC47-206ENST00000584112 SLAQ13239 276 aa7.69□□□□□ -1.18
CCDC47-206ENST00000584112 ZNF266Q14584 549 aa7.69□□□□□ -1.18
CCDC47-206ENST00000584112 ACOT6Q3I5F7 207 aaPredicted RBP7.69□□□□□ -1.18
CCDC47-206ENST00000584112 FAM74A1Q5RGS3 127 aa7.69□□□□□ -1.18
CCDC47-206ENST00000584112 PRR9Q5T870 116 aa7.69□□□□□ -1.18
CCDC47-206ENST00000584112 Q8TAT8 98 aa7.69□□□□□ -1.18
CCDC47-206ENST00000584112 BATF3Q9NR55 127 aa7.69□□□□□ -1.18
CCDC47-206ENST00000584112 MRPS16Q9Y3D3 137 aaKnown RBP7.69□□□□□ -1.18
CCDC47-206ENST00000584112 KLF12Q9Y4X4 402 aa7.69□□□□□ -1.18
CCDC47-206ENST00000584112 A0A1W2PPQ1 181 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 A0A1W2PPV4 95 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 DIRC3C9JPN6 131 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 EREGO14944 169 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 ESRGQ1W209 222 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 PQLC2Q6ZP29 291 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 Q6ZSN1 163 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 ARL6IP6Q8N6S5 226 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 CMTM2Q8TAZ6 248 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 TMED6Q8WW62 240 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 ST6GAL2Q96JF0 529 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 OTORQ9NRC9 128 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 TP53TG3Q9ULZ0 132 aa7.68□□□□□ -1.18
CCDC47-206ENST00000584112 A0A096LPF7 62 aa7.67□□□□□ -1.18
CCDC47-206ENST00000584112 BTF3P20290 206 aaKnown RBP7.67□□□□□ -1.18
CCDC47-206ENST00000584112 Q6AWC8 147 aa7.67□□□□□ -1.18
CCDC47-206ENST00000584112 VSIG2Q96IQ7 327 aa7.67□□□□□ -1.18
CCDC47-206ENST00000584112 HYLS1Q96M11 299 aa7.67□□□□□ -1.18
CCDC47-206ENST00000584112 MRPL16Q9NX20 251 aaKnown RBP7.67□□□□□ -1.18
CCDC47-206ENST00000584112 ICOSQ9Y6W8 199 aa7.67□□□□□ -1.18
CCDC47-206ENST00000584112 TRGV11A0A075B6L2 103 aa7.66□□□□□ -1.18
CCDC47-206ENST00000584112 PGPA6NDG6 321 aa7.66□□□□□ -1.18
CCDC47-206ENST00000584112 PAX4O43316 350 aa7.66□□□□□ -1.18
CCDC47-206ENST00000584112 FAM159AQ6UWV7 190 aa7.66□□□□□ -1.18
CCDC47-206ENST00000584112 WFDC1Q9HC57 220 aa7.66□□□□□ -1.18
CCDC47-206ENST00000584112 PRO0255Q9UI72 69 aa7.66□□□□□ -1.18
CCDC47-206ENST00000584112 ALG5Q9Y673 324 aa7.66□□□□□ -1.18
CCDC47-206ENST00000584112 PTTG1O95997 202 aa7.65□□□□□ -1.18
CCDC47-206ENST00000584112 IGHV3-53P01767 116 aa7.65□□□□□ -1.18
CCDC47-206ENST00000584112 RAB2AP61019 212 aa7.65□□□□□ -1.18
CCDC47-206ENST00000584112 MUC21Q5SSG8 566 aa7.65□□□□□ -1.18
CCDC47-206ENST00000584112 Q6ZQT7 251 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms