RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 U3KQK5 164 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 PRKDCP78527 4128 aaKnown RBP6.78□□□□□ -1.32
UBBP4-201ENST00000583708 AGRNO00468 2067 aa6.78□□□□□ -1.32
UBBP4-201ENST00000583708 FABP5P3A8MUU1 101 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 M0R2Z0 102 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 RGS13O14921 159 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 ZNF324O75467 553 aaPredicted RBP6.77□□□□□ -1.33
UBBP4-201ENST00000583708 LTAP01374 205 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 GNG5P63218 68 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 RRN3P1Q2M238 152 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 DEFB135Q30KP9 77 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 TDRG1Q3Y452 100 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 GFI1BQ5VTD9 330 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 PRNTQ86SH4 94 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 TMEM183AQ8IXX5 376 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 C1orf158Q8N1D5 194 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 IL17DQ8TAD2 202 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 LINC01587Q99440 93 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 C11orf68Q9H3H3 251 aaKnown RBP6.77□□□□□ -1.33
UBBP4-201ENST00000583708 TP53TG3Q9ULZ0 132 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 RPH3ALQ9UNE2 315 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 LY96Q9Y6Y9 160 aa6.77□□□□□ -1.33
UBBP4-201ENST00000583708 DNAH9Q9NYC9 4486 aa6.76□□□□□ -1.33
UBBP4-201ENST00000583708 SCO2A0A1W2PP80 73 aa6.76□□□□□ -1.33
UBBP4-201ENST00000583708 C9JCJ5 164 aa6.76□□□□□ -1.33
UBBP4-201ENST00000583708 RNASE4P34096 147 aaKnown RBP6.76□□□□□ -1.33
UBBP4-201ENST00000583708 RPL35P42766 123 aaKnown RBP6.76□□□□□ -1.33
UBBP4-201ENST00000583708 IFITM2Q01629 132 aa6.76□□□□□ -1.33
UBBP4-201ENST00000583708 ANXA2RQ3ZCQ2 193 aa6.76□□□□□ -1.33
UBBP4-201ENST00000583708 Q86TA4 180 aa6.76□□□□□ -1.33
UBBP4-201ENST00000583708 BAGE2Q86Y30 109 aa6.76□□□□□ -1.33
UBBP4-201ENST00000583708 MLST8Q9BVC4 326 aa6.76□□□□□ -1.33
UBBP4-201ENST00000583708 TRAV8-1A0A0A6YYK1 113 aa6.75□□□□□ -1.33
UBBP4-201ENST00000583708 TRAV12-3A0A0B4J271 114 aa6.75□□□□□ -1.33
UBBP4-201ENST00000583708 PFN1P07737 140 aaKnown RBP6.75□□□□□ -1.33
UBBP4-201ENST00000583708 FXYD7P58549 80 aa6.75□□□□□ -1.33
UBBP4-201ENST00000583708 TOR2AQ5JU69 321 aa6.75□□□□□ -1.33
UBBP4-201ENST00000583708 IBA57Q5T440 356 aaKnown RBP6.75□□□□□ -1.33
UBBP4-201ENST00000583708 UQCC3Q6UW78 93 aa6.75□□□□□ -1.33
UBBP4-201ENST00000583708 FAM159AQ6UWV7 190 aa6.75□□□□□ -1.33
UBBP4-201ENST00000583708 EIF4E3Q8N5X7 224 aaKnown RBP6.75□□□□□ -1.33
UBBP4-201ENST00000583708 C16orf74Q96GX8 76 aa6.75□□□□□ -1.33
UBBP4-201ENST00000583708 X6R8D5 127 aa6.75□□□□□ -1.33
UBBP4-201ENST00000583708 TRGV11A0A075B6L2 103 aa6.74□□□□□ -1.33
UBBP4-201ENST00000583708 TRAV12-2A0A075B6T6 113 aa6.74□□□□□ -1.33
UBBP4-201ENST00000583708 IGHV1OR15-1A0A075B7D0 117 aa6.74□□□□□ -1.33
UBBP4-201ENST00000583708 TRAV34A0A0B4J273 112 aa6.74□□□□□ -1.33
UBBP4-201ENST00000583708 GCGP01275 180 aa6.74□□□□□ -1.33
UBBP4-201ENST00000583708 GNG4P50150 75 aa6.74□□□□□ -1.33
UBBP4-201ENST00000583708 FAM162BQ5T6X4 162 aa6.74□□□□□ -1.33
UBBP4-201ENST00000583708 Q8TAT8 98 aa6.74□□□□□ -1.33
UBBP4-201ENST00000583708 TMEM263Q8WUH6 116 aaKnown RBP6.74□□□□□ -1.33
UBBP4-201ENST00000583708 TVP23CQ96ET8 276 aa6.74□□□□□ -1.33
UBBP4-201ENST00000583708 LINC00479Q96M42 142 aa6.74□□□□□ -1.33
UBBP4-201ENST00000583708 NDUFAF3Q9BU61 184 aa6.74□□□□□ -1.33
UBBP4-201ENST00000583708 LYRM9A8MSI8 78 aa6.73□□□□□ -1.33
UBBP4-201ENST00000583708 SRP19P09132 144 aaKnown RBP6.73□□□□□ -1.33
UBBP4-201ENST00000583708 CXCL1P09341 107 aa6.73□□□□□ -1.33
UBBP4-201ENST00000583708 DAZ2Q13117 558 aaKnown RBP6.73□□□□□ -1.33
UBBP4-201ENST00000583708 ZNF674Q2M3X9 581 aa6.73□□□□□ -1.33
UBBP4-201ENST00000583708 DNLZQ5SXM8 178 aa6.73□□□□□ -1.33
UBBP4-201ENST00000583708 Q8NAQ8 132 aa6.73□□□□□ -1.33
UBBP4-201ENST00000583708 SPXQ9BT56 116 aa6.73□□□□□ -1.33
UBBP4-201ENST00000583708 STAB2Q8WWQ8 2551 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 IGHV3OR16-12A0A075B7B8 117 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 XKRY2A2RUG3 117 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 SPART-AS1P0CW21 52 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 RPS20P60866 119 aaKnown RBP6.72□□□□□ -1.33
UBBP4-201ENST00000583708 BTN1A1Q13410 526 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 LGALS9BQ3B8N2 356 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 CENPWQ5EE01 88 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 PIK3CD-AS1Q5SR53 167 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 PTH2Q96A98 100 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 DAZAP1Q96EP5 407 aaKnown RBP6.72□□□□□ -1.33
UBBP4-201ENST00000583708 SGK494Q96LW2 274 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 PARLQ9H300 379 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 SDF2L1Q9HCN8 221 aa6.72□□□□□ -1.33
UBBP4-201ENST00000583708 TIMM8BQ9Y5J9 83 aaPredicted RBP6.72□□□□□ -1.33
UBBP4-201ENST00000583708 COL7A1Q02388 2944 aa6.71□□□□□ -1.33
UBBP4-201ENST00000583708 IGHV4-28A0A0C4DH34 117 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 LINC00862A6NCI5 91 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 CBY3A6NI87 242 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 ZNF727A8MUV8 499 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 SNURFLB1AK76 121 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 RBMY1A1P0DJD3 496 aaKnown RBP6.71□□□□□ -1.34
UBBP4-201ENST00000583708 RBMY1CP0DJD4 496 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 KIR3DS1Q14943 382 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 RBMY1FQ15415 496 aaKnown RBP6.71□□□□□ -1.34
UBBP4-201ENST00000583708 TMEM241Q24JQ0 296 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 SOHLH1Q5JUK2 328 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 RNASE8Q8TDE3 154 aaKnown RBP6.71□□□□□ -1.34
UBBP4-201ENST00000583708 ZC2HC1AQ96GY0 325 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 SMIM7Q9BQ49 75 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 EDA2RQ9HAV5 297 aa6.71□□□□□ -1.34
UBBP4-201ENST00000583708 HUWE1Q7Z6Z7 4374 aaKnown RBP6.71□□□□□ -1.34
UBBP4-201ENST00000583708 TGP01266 2768 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 CXorf65A6NEN9 183 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 ZNF705GA8MUZ8 300 aaPredicted RBP6.7□□□□□ -1.34
UBBP4-201ENST00000583708 J3KRW8 73 aa6.7□□□□□ -1.34
UBBP4-201ENST00000583708 CIDEAO60543 219 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms