RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 RHBDL2Q9NX52 303 aa1.33□□□□□ -2.2
COPS3-217ENST00000583160 CACFD1Q9UGQ2 172 aa1.33□□□□□ -2.2
COPS3-217ENST00000583160 PKD1P98161 4303 aa1.33□□□□□ -2.2
COPS3-217ENST00000583160 HSPG2P98160 4391 aa1.33□□□□□ -2.2
COPS3-217ENST00000583160 IGHV3-49A0A0A0MS15 119 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 TRAV10A0A0B4J240 114 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 PNMA8CA0A1B0GUJ8 204 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 TMEM189A5PLL7 270 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 OR2T8A6NH00 312 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 H3BMM0 161 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 H3BNG1 76 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 GPR31O00270 319 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 NUPL2O15504 423 aaKnown RBP1.32□□□□□ -2.2
COPS3-217ENST00000583160 CDS2O95674 445 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 IGKV1-39P01597 117 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 IGKV1D-39P04432 117 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 IFNA4P05014 189 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 PFN1P07737 140 aaKnown RBP1.32□□□□□ -2.2
COPS3-217ENST00000583160 APELAP0DMC3 54 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 OR13C7P0DN81 318 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 DEFA4P12838 97 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 MYL9P24844 172 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 PSMB9P28065 219 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 TSPOP30536 169 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 TALDO1P37837 337 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 AQP4P55087 323 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 OR10A3P58181 314 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 TAS2R46P59540 309 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 GNG2P59768 71 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 PAFAH1B2P68402 229 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 DEFA5Q01523 94 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 SSBP1Q04837 148 aaKnown RBP1.32□□□□□ -2.2
COPS3-217ENST00000583160 C12orf74Q32Q52 190 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 C1orf194Q5T5A4 169 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 AADACL3Q5VUY0 350 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 SPATA31B1PQ5VZV4 182 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 TOMM20LQ6UXN7 152 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 CMTM1Q8IZ96 169 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 OR10W1Q8NGF6 305 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 MAFIPQ8WZ33 124 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 C18orf15Q96N68 181 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 GINS3Q9BRX5 216 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 ATG5Q9H1Y0 275 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 MS4A6AQ9H2W1 248 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 DIABLOQ9NR28 239 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 TAS2R8Q9NYW2 309 aa1.32□□□□□ -2.2
COPS3-217ENST00000583160 RBM7Q9Y580 266 aaKnown RBP1.32□□□□□ -2.2
COPS3-217ENST00000583160 RYR1P21817 5038 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 SMCO3A2RU48 225 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 KRBOX1C9JBD0 128 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 SNAPC5O75971 98 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 MT-CO2P00403 227 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 KRASP01116 189 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 APOA1P02647 267 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 IGLC1P0CG04 106 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 SLC25A4P12235 298 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 HLA-DRB4P13762 266 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 NPPCP23582 126 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 HLA-DMBP28068 263 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 SDC2P34741 201 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 G6PCP35575 357 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 GPX4P36969 197 aaPredicted RBP1.31□□□□□ -2.2
COPS3-217ENST00000583160 LPAR6P43657 344 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 EIF2B2P49770 351 aaKnown RBP1.31□□□□□ -2.2
COPS3-217ENST00000583160 DEFB131AP59861 70 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 SEC61GP60059 68 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 SPCS3P61009 180 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 B2MP61769 119 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 ERHP84090 104 aaKnown RBP1.31□□□□□ -2.2
COPS3-217ENST00000583160 SURF2Q15527 256 aaPredicted RBP1.31□□□□□ -2.2
COPS3-217ENST00000583160 NMSQ5H8A3 153 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 C6orf226Q5I0X4 101 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 UBE2NLQ5JXB2 153 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 SAMD13Q5VXD3 122 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 C22orf42Q6IC83 251 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 PRSS54Q6PEW0 395 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 AMTNQ6UX39 209 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 TCF24Q7RTU0 167 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 APRG1Q8IVJ8 170 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 FAM24BQ8N5W8 94 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 C15orf53Q8NAA6 179 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 OR5H6Q8NGV6 325 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 LGALS14Q8TCE9 139 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 ZFAND1Q8TCF1 268 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 RNASEH2CQ8TDP1 164 aaKnown RBP1.31□□□□□ -2.2
COPS3-217ENST00000583160 GLYATL2Q8WU03 294 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 S100A16Q96FQ6 103 aaKnown RBP1.31□□□□□ -2.2
COPS3-217ENST00000583160 UPK3BQ9BT76 320 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 DCUN1D5Q9BTE7 237 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 CHCHD7Q9BUK0 85 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 FXYD6Q9H0Q3 95 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 VCX3BQ9H321 246 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 HRASLSQ9HDD0 168 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 RABL2AQ9UBK7 228 aaPredicted RBP1.31□□□□□ -2.2
COPS3-217ENST00000583160 MTFP1Q9UDX5 166 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 SSR3Q9UNL2 185 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 RABL2BQ9UNT1 228 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 RRP15Q9Y3B9 282 aaKnown RBP1.31□□□□□ -2.2
COPS3-217ENST00000583160 OR51B2Q9Y5P1 312 aa1.31□□□□□ -2.2
COPS3-217ENST00000583160 PUS1Q9Y606 427 aaKnown RBP eCLIP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms