RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 C16orf54Q6UWD8 224 aa7.7□□□□□ -1.18
SS18-221ENST00000582448 SBSPONQ8IVN8 264 aa7.7□□□□□ -1.18
SS18-221ENST00000582448 TMEM75Q8N9X5 138 aa7.7□□□□□ -1.18
SS18-221ENST00000582448 IGF2BP2-AS1Q96M15 143 aa7.7□□□□□ -1.18
SS18-221ENST00000582448 IMMP2LQ96T52 175 aa7.7□□□□□ -1.18
SS18-221ENST00000582448 MLXQ9UH92 298 aa7.7□□□□□ -1.18
SS18-221ENST00000582448 SMAD5-AS1Q9Y6J3 95 aa7.7□□□□□ -1.18
SS18-221ENST00000582448 URGCP-MRPS24S4R325 110 aa7.7□□□□□ -1.18
SS18-221ENST00000582448 IGHV3OR16-13A0A075B7E8 117 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 IGHV3-49A0A0A0MS15 119 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 IGHV3-74A0A0B4J1X5 117 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 TRAV34A0A0B4J273 112 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 IGHV7-4-1A0A0J9YVY3 117 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 TRBV6-1A0A0K0K1D8 114 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 COLCA2A8K830 154 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 SLC17A3O00476 420 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 GCGP01275 180 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 RAB5AP20339 215 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 CDX1P47902 265 aaPredicted RBP7.69□□□□□ -1.18
SS18-221ENST00000582448 FLI1Q01543 452 aaPredicted RBP7.69□□□□□ -1.18
SS18-221ENST00000582448 IBA57Q5T440 356 aaKnown RBP7.69□□□□□ -1.18
SS18-221ENST00000582448 UNQ9165/PRO28630Q6UXU0 137 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 MYOZ3Q8TDC0 251 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 DAZAP1Q96EP5 407 aaKnown RBP7.69□□□□□ -1.18
SS18-221ENST00000582448 C17orf77Q96MU5 243 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 NDFIP1Q9BT67 221 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 C1orf43Q9BWL3 253 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 ZNF331Q9NQX6 463 aaPredicted RBP7.69□□□□□ -1.18
SS18-221ENST00000582448 OSTCQ9NRP0 149 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 ZFP30Q9Y2G7 519 aa7.69□□□□□ -1.18
SS18-221ENST00000582448 ZNF256Q9Y2P7 627 aaPredicted RBP7.69□□□□□ -1.18
SS18-221ENST00000582448 C1orf196B1AJZ1 125 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 LGALS9O00182 355 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 CT45A10P0DMU9 189 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 RAB5BP61020 215 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 ELOBQ15370 118 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 PSG3Q16557 428 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 SAPCD1Q5SSQ6 148 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 ADAMTSL5Q6ZMM2 481 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 PRNTQ86SH4 94 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 C4orf3Q8WVX3 66 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 FAM210BQ96KR6 192 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 LINC00479Q96M42 142 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 RHPN1-AS1Q9BWJ2 59 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 SMPXQ9UHP9 88 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 BIRC6Q9NR09 4857 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 RYR2Q92736 4967 aa7.68□□□□□ -1.18
SS18-221ENST00000582448 EPPK1P58107 5090 aaKnown RBP7.68□□□□□ -1.18
SS18-221ENST00000582448 ZNF705GA8MUZ8 300 aaPredicted RBP7.67□□□□□ -1.18
SS18-221ENST00000582448 LINC01619G3V211 115 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 K7EN84 100 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 GATCO43716 136 aaKnown RBP7.67□□□□□ -1.18
SS18-221ENST00000582448 LTAP01374 205 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 APOHP02749 345 aaPredicted RBP7.67□□□□□ -1.18
SS18-221ENST00000582448 ID1P41134 155 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 RPS10P46783 165 aaKnown RBP7.67□□□□□ -1.18
SS18-221ENST00000582448 LCN12Q6JVE5 192 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 PRR27Q6MZM9 219 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 FAM231DQ6ZW35 169 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 Q86TA4 180 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 NHLRC2Q8NBF2 726 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 GLMPQ8WWB7 406 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 MRPL53Q96EL3 112 aaKnown RBP7.67□□□□□ -1.18
SS18-221ENST00000582448 NRN1Q9NPD7 142 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 PEMTQ9UBM1 199 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 PSG8Q9UQ74 426 aa7.67□□□□□ -1.18
SS18-221ENST00000582448 TRBV24-1A0A075B6N3 115 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 TRAV9-1A0A075B6T8 112 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 IGHV4OR15-8A0A075B7B6 117 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 A0A087WW49 117 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 A0A1W2PPQ1 181 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 RBAKDNA6NC62 111 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 A8MWP6 167 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 M0R3E3 92 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 CHEK1O14757 476 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 FOLR2P14207 255 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 OR5I1Q13606 314 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 TMEM183AQ8IXX5 376 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 GBGT1Q8N5D6 347 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 OR11H1Q8NG94 326 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 OR1N2Q8NGR9 330 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 SGK494Q96LW2 274 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 IL36BQ9NZH7 164 aa7.66□□□□□ -1.18
SS18-221ENST00000582448 TGIF2-C20orf24A0A0A6YYL0 155 aa7.65□□□□□ -1.18
SS18-221ENST00000582448 IGLV2-8P01709 118 aa7.65□□□□□ -1.18
SS18-221ENST00000582448 P01737 135 aa7.65□□□□□ -1.18
SS18-221ENST00000582448 PFN1P07737 140 aaKnown RBP7.65□□□□□ -1.18
SS18-221ENST00000582448 FRMD6-AS1P0C7T7 363 aa7.65□□□□□ -1.18
SS18-221ENST00000582448 SYNJ2BPP57105 145 aa7.65□□□□□ -1.18
SS18-221ENST00000582448 PAFAH1B2P68402 229 aa7.65□□□□□ -1.18
SS18-221ENST00000582448 TMEM78Q5T7P6 136 aa7.65□□□□□ -1.18
SS18-221ENST00000582448 TCF24Q7RTU0 167 aa7.65□□□□□ -1.18
SS18-221ENST00000582448 DYNC2H1Q8NCM8 4307 aaKnown RBP7.65□□□□□ -1.18
SS18-221ENST00000582448 RNASE7Q9H1E1 156 aaKnown RBP7.65□□□□□ -1.18
SS18-221ENST00000582448 ZNF492Q9P255 531 aa7.65□□□□□ -1.18
SS18-221ENST00000582448 HUWE1Q7Z6Z7 4374 aaKnown RBP7.65□□□□□ -1.19
SS18-221ENST00000582448 SACSQ9NZJ4 4579 aa7.64□□□□□ -1.19
SS18-221ENST00000582448 TRAV8-1A0A0A6YYK1 113 aa7.64□□□□□ -1.19
SS18-221ENST00000582448 OVOL1O14753 267 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms