RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 LYRM9A8MSI8 78 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 H3BQ15 152 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 HMGB3O15347 200 aaKnown RBP5.29□□□□□ -1.56
CCDC47-205ENST00000582331 IFNA1P01562 189 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 DEFB130BP0DP73 79 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 DEFB130AP0DP74 79 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 HOXA5P20719 270 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 ID1P41134 155 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 RPL29P47914 159 aaKnown RBP5.29□□□□□ -1.56
CCDC47-205ENST00000582331 SPATA31B1PQ5VZV4 182 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 TMEM144Q7Z5S9 345 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 CYB561D1Q8N8Q1 229 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 Q9H3A6 140 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 SMCO4Q9NRQ5 59 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 VAX2Q9UIW0 290 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 SLC45A2Q9UMX9 530 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 PXMP4Q9Y6I8 212 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
CCDC47-205ENST00000582331 IGKV1OR2-108A0A075B7D4 117 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 CBY3A6NI87 242 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 M0R036 132 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 BUB3O43684 328 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 SMR3BP02814 79 aaPredicted RBP5.28□□□□□ -1.56
CCDC47-205ENST00000582331 ATP5G1P05496 136 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 FUSP35637 526 aaKnown RBP eCLIP5.28□□□□□ -1.56
CCDC47-205ENST00000582331 GPX4P36969 197 aaPredicted RBP5.28□□□□□ -1.56
CCDC47-205ENST00000582331 TAGLN2P37802 199 aaKnown RBP5.28□□□□□ -1.56
CCDC47-205ENST00000582331 AKR1C3P42330 323 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 ATP5G3P48201 142 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 CDC34P49427 236 aaPredicted RBP5.28□□□□□ -1.56
CCDC47-205ENST00000582331 YPEL3P61236 119 aaPredicted RBP5.28□□□□□ -1.56
CCDC47-205ENST00000582331 GAMTQ14353 236 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 RHEBQ15382 184 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 EBLN2Q6P2I7 272 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 TEPPQ6URK8 271 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 IGF2BP2-AS1Q96M15 143 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 C17orf77Q96MU5 243 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 YPEL4Q96NS1 127 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 RPS10P5Q9NQ39 176 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 KCNIP2Q9NS61 270 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 ZNF586Q9NXT0 402 aa5.28□□□□□ -1.56
CCDC47-205ENST00000582331 A0A087WWC5 75 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 ZNF705GA8MUZ8 300 aaPredicted RBP5.27□□□□□ -1.57
CCDC47-205ENST00000582331 TMEM250H0YL14 139 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 PRM2P04554 102 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 IL4P05112 153 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 IGLC1P0CG04 106 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 STAG3L2P0CL84 134 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 STAG3L3P0CL85 134 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 OR10J1P30954 320 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 PSMB3P49720 205 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 B2MP61769 119 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 MEF2BQ02080 365 aaPredicted RBP5.27□□□□□ -1.57
CCDC47-205ENST00000582331 RAB31Q13636 194 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 ANKRD39Q53RE8 183 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 FAM78BQ5VT40 261 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 C15orf54Q8N8G6 183 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 RNASEH2CQ8TDP1 164 aaKnown RBP5.27□□□□□ -1.57
CCDC47-205ENST00000582331 HIST1H2BAQ96A08 127 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 TVP23CQ96ET8 276 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 C20orf173Q96LM9 149 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 UHRF2Q96PU4 802 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 SDF2L1Q9HCN8 221 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 MANBALQ9NQG1 85 aa5.27□□□□□ -1.57
CCDC47-205ENST00000582331 FLG2Q5D862 2391 aaPredicted RBP5.26□□□□□ -1.57
CCDC47-205ENST00000582331 IGKV1D-37A0A075B6S9 117 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 A0A1W2PPV4 95 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 F6UB75 175 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 PAGE4O60829 102 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 RD3LP0DJH9 198 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 RND2P52198 227 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 CEBPGP53567 150 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 LINC00315P59091 139 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 KRTAP10-1P60331 282 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 Q6ZSN1 163 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 THAP8Q8NA92 274 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 SYT8Q8NBV8 401 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 ZNF503Q96F45 646 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 SLC35E1Q96K37 410 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 UPK3BQ9BT76 320 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 KRTAP4-2Q9BYR5 136 aa5.26□□□□□ -1.57
CCDC47-205ENST00000582331 A0A0J9YX75 114 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 ZNF727A8MUV8 499 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 CXorf1O96002 111 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 TOMM40O96008 361 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 MT-ND4LP03901 98 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 OR5G3P0C626 314 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 ARL14EPLP0DKL9 152 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 GATA2P23769 480 aaPredicted RBP5.25□□□□□ -1.57
CCDC47-205ENST00000582331 GCHFRP30047 84 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 TSPOP30536 169 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 ERVFC1-1P60608 527 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 RHOBP62745 196 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 ESRGQ1W209 222 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 SERTAD4-AS1Q5TG53 156 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 Q6ZRN7 208 aaPredicted RBP5.25□□□□□ -1.57
CCDC47-205ENST00000582331 CYP2G1PQ6ZSU1 146 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 OR51G1Q8NGK1 321 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 ISOC2Q96AB3 205 aa5.25□□□□□ -1.57
CCDC47-205ENST00000582331 AP5S1Q9NUS5 200 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms