RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 ZNF138P52744 262 aa7.21□□□□□ -1.26
RFFL-209ENST00000581265 ERVFC1-1P60608 527 aa7.21□□□□□ -1.26
RFFL-209ENST00000581265 NHLH2Q02577 135 aa7.21□□□□□ -1.26
RFFL-209ENST00000581265 FAM122CQ6P4D5 195 aa7.21□□□□□ -1.26
RFFL-209ENST00000581265 MIR17HGQ75NE6 70 aa7.21□□□□□ -1.26
RFFL-209ENST00000581265 C8orf49Q96NF6 230 aa7.21□□□□□ -1.26
RFFL-209ENST00000581265 OR51M1Q9H341 326 aa7.21□□□□□ -1.26
RFFL-209ENST00000581265 GPN1Q9HCN4 374 aaPredicted RBP7.21□□□□□ -1.26
RFFL-209ENST00000581265 UBR4Q5T4S7 5183 aa7.21□□□□□ -1.26
RFFL-209ENST00000581265 SYT8Q8NBV8 401 aa7.2□□□□□ -1.26
RFFL-209ENST00000581265 OR5C1Q8NGR4 320 aa7.2□□□□□ -1.26
RFFL-209ENST00000581265 RASL10AQ92737 203 aa7.2□□□□□ -1.26
RFFL-209ENST00000581265 FXYD5Q96DB9 178 aa7.2□□□□□ -1.26
RFFL-209ENST00000581265 ARPC5LQ9BPX5 153 aa7.2□□□□□ -1.26
RFFL-209ENST00000581265 LY96Q9Y6Y9 160 aa7.2□□□□□ -1.26
RFFL-209ENST00000581265 A0A087WTM6 91 aa7.19□□□□□ -1.26
RFFL-209ENST00000581265 RBAKDNA6NC62 111 aa7.19□□□□□ -1.26
RFFL-209ENST00000581265 FUSP35637 526 aaKnown RBP eCLIP7.19□□□□□ -1.26
RFFL-209ENST00000581265 ZNF415Q09FC8 603 aa7.19□□□□□ -1.26
RFFL-209ENST00000581265 ZNF266Q14584 549 aa7.19□□□□□ -1.26
RFFL-209ENST00000581265 THAP6Q8TBB0 222 aa7.19□□□□□ -1.26
RFFL-209ENST00000581265 PAXXQ9BUH6 204 aa7.19□□□□□ -1.26
RFFL-209ENST00000581265 MDFICQ9P1T7 246 aa7.19□□□□□ -1.26
RFFL-209ENST00000581265 TRGV4A0A0C4DH28 118 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 FAM240BA0A1B0GVZ2 78 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 E5RGE8 158 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 K7EQD1 137 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 IFNA5P01569 189 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 OR10J4P0C629 311 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 DNAH10OSP0CZ25 163 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 CSN1S1P47710 185 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 KRTAP10-1P60331 282 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 RANP62826 216 aaKnown RBP7.18□□□□□ -1.26
RFFL-209ENST00000581265 OR10G4Q8NGN3 311 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 Q8TAT8 98 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 PHYHIPLQ96FC7 376 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 ZNF479Q96JC4 524 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 SPXQ9BT56 116 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 CCDC32Q9BV29 185 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 WDR61Q9GZS3 305 aaKnown RBP7.18□□□□□ -1.26
RFFL-209ENST00000581265 SLC25A31Q9H0C2 315 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 KCNIP2Q9NS61 270 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 MSRB1Q9NZV6 116 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 LENEPQ9Y5L5 61 aa7.18□□□□□ -1.26
RFFL-209ENST00000581265 FAM229AH3BQW9 127 aa7.17□□□□□ -1.26
RFFL-209ENST00000581265 ORM1P02763 201 aa7.17□□□□□ -1.26
RFFL-209ENST00000581265 SFTA3P0C7M3 94 aa7.17□□□□□ -1.26
RFFL-209ENST00000581265 EVI2AP22794 236 aa7.17□□□□□ -1.26
RFFL-209ENST00000581265 SRIP30626 198 aa7.17□□□□□ -1.26
RFFL-209ENST00000581265 MUC21Q5SSG8 566 aa7.17□□□□□ -1.26
RFFL-209ENST00000581265 SERTAD4-AS1Q5TG53 156 aa7.17□□□□□ -1.26
RFFL-209ENST00000581265 Q6AWC8 147 aa7.17□□□□□ -1.26
RFFL-209ENST00000581265 H0YIZ8 118 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 OR7C2O60412 319 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 GYPEP15421 78 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 TMEM183BQ1AE95 376 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 TDRG1Q3Y452 100 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 FAM159AQ6UWV7 190 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 WFDC10BQ8IUB3 73 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 TMEM183AQ8IXX5 376 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 TMED6Q8WW62 240 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 TXNDC17Q9BRA2 123 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 NMES1Q9C002 83 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 OR5AC2Q9NZP5 309 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 NDUFA13Q9P0J0 144 aa7.16□□□□□ -1.26
RFFL-209ENST00000581265 TRGV11A0A075B6L2 103 aa7.15□□□□□ -1.26
RFFL-209ENST00000581265 C9JCJ5 164 aa7.15□□□□□ -1.26
RFFL-209ENST00000581265 DIRC3C9JPN6 131 aa7.15□□□□□ -1.26
RFFL-209ENST00000581265 C17orf112F2Z3M2 114 aa7.15□□□□□ -1.26
RFFL-209ENST00000581265 SIX6O95475 246 aa7.15□□□□□ -1.26
RFFL-209ENST00000581265 GCSHP23434 173 aa7.15□□□□□ -1.26
RFFL-209ENST00000581265 CYCSP99999 105 aaKnown RBP7.15□□□□□ -1.26
RFFL-209ENST00000581265 MZT2BQ6NZ67 158 aa7.15□□□□□ -1.26
RFFL-209ENST00000581265 LINC00299Q6ZSB3 139 aa7.15□□□□□ -1.26
RFFL-209ENST00000581265 C10orf126Q8N4M7 172 aa7.15□□□□□ -1.26
RFFL-209ENST00000581265 PCNPQ8WW12 178 aaKnown RBP7.15□□□□□ -1.26
RFFL-209ENST00000581265 FAT1Q14517 4588 aa7.15□□□□□ -1.27
RFFL-209ENST00000581265 FLG2Q5D862 2391 aaPredicted RBP7.15□□□□□ -1.27
RFFL-209ENST00000581265 TRAV4A0A0B4J268 109 aa7.14□□□□□ -1.27
RFFL-209ENST00000581265 SMR3BP02814 79 aaPredicted RBP7.14□□□□□ -1.27
RFFL-209ENST00000581265 CRYGDP07320 174 aa7.14□□□□□ -1.27
RFFL-209ENST00000581265 TIRAPP58753 221 aa7.14□□□□□ -1.27
RFFL-209ENST00000581265 UBE2L3P68036 154 aaKnown RBP7.14□□□□□ -1.27
RFFL-209ENST00000581265 ASAH1Q13510 395 aa7.14□□□□□ -1.27
RFFL-209ENST00000581265 SH2D6Q7Z4S9 175 aa7.14□□□□□ -1.27
RFFL-209ENST00000581265 ARL6IP6Q8N6S5 226 aa7.14□□□□□ -1.27
RFFL-209ENST00000581265 OR4C5Q8NGB2 326 aa7.14□□□□□ -1.27
RFFL-209ENST00000581265 IGHV3-16A0A0C4DH30 117 aa7.13□□□□□ -1.27
RFFL-209ENST00000581265 M0R2P5 195 aa7.13□□□□□ -1.27
RFFL-209ENST00000581265 GNRH2O43555 120 aa7.13□□□□□ -1.27
RFFL-209ENST00000581265 TAS2R45P59539 299 aa7.13□□□□□ -1.27
RFFL-209ENST00000581265 LRRC37A5PQ49AS3 106 aa7.13□□□□□ -1.27
RFFL-209ENST00000581265 KHDC3LQ587J8 217 aa7.13□□□□□ -1.27
RFFL-209ENST00000581265 FFAR4Q5NUL3 377 aa7.13□□□□□ -1.27
RFFL-209ENST00000581265 Q6ZSN1 163 aa7.13□□□□□ -1.27
RFFL-209ENST00000581265 ATP5SQ99766 215 aa7.13□□□□□ -1.27
RFFL-209ENST00000581265 OTORQ9NRC9 128 aa7.13□□□□□ -1.27
RFFL-209ENST00000581265 IGHV3-38A0A0C4DH36 116 aa7.12□□□□□ -1.27
RFFL-209ENST00000581265 LRCOL1A6NCL2 159 aa7.12□□□□□ -1.27
RFFL-209ENST00000581265 PGPA6NDG6 321 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms