RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 TTTY13Q9BZ97 58 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 TMEM131Q92545 1883 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 CHD9Q3L8U1 2897 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 K7ERJ3 54 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 LHBP01229 141 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 IGKV1-17P01599 117 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 C1orf229Q6ZS94 237 aaPredicted RBP9.53□□□□□ -0.88
ERBB2-206ENST00000578373 C22orf34Q6ZV56 151 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 FAM167A-AS1Q96KT0 104 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 TP73-AS1Q9UF72 201 aa9.53□□□□□ -0.88
ERBB2-206ENST00000578373 F6UB75 175 aa9.52□□□□□ -0.88
ERBB2-206ENST00000578373 IGHV3-53P01767 116 aa9.52□□□□□ -0.88
ERBB2-206ENST00000578373 MINOS1Q5TGZ0 78 aa9.52□□□□□ -0.88
ERBB2-206ENST00000578373 TMEM101Q96IK0 257 aa9.52□□□□□ -0.88
ERBB2-206ENST00000578373 GFRA4Q9GZZ7 299 aa9.52□□□□□ -0.88
ERBB2-206ENST00000578373 MINOS1-NBL1R4GNA1 71 aa9.52□□□□□ -0.88
ERBB2-206ENST00000578373 C3orf36Q3SXR2 165 aa9.52□□□□□ -0.89
ERBB2-206ENST00000578373 OVOL1O14753 267 aa9.52□□□□□ -0.89
ERBB2-206ENST00000578373 ETDBQ3ZM63 59 aa9.52□□□□□ -0.89
ERBB2-206ENST00000578373 PCP2Q8IVA1 136 aa9.52□□□□□ -0.89
ERBB2-206ENST00000578373 OR5A1Q8NGJ0 315 aa9.52□□□□□ -0.89
ERBB2-206ENST00000578373 PGPEP1Q9NXJ5 209 aa9.52□□□□□ -0.89
ERBB2-206ENST00000578373 M0R1W7 72 aa9.52□□□□□ -0.89
ERBB2-206ENST00000578373 OCIAD2Q56VL3 154 aa9.52□□□□□ -0.89
ERBB2-206ENST00000578373 AMTNQ6UX39 209 aa9.52□□□□□ -0.89
ERBB2-206ENST00000578373 C1orf122Q6ZSJ8 110 aa9.52□□□□□ -0.89
ERBB2-206ENST00000578373 MRPL35Q9NZE8 188 aaKnown RBP9.52□□□□□ -0.89
ERBB2-206ENST00000578373 EGR2P11161 476 aaPredicted RBP9.51□□□□□ -0.89
ERBB2-206ENST00000578373 PDE6HQ13956 83 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 SPRY4Q9C004 299 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 DPH3P1Q9H4G8 78 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 A0A1B0GV72 72 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 IGFL3Q6UXB1 125 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 STHQ8IWL8 128 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 TEX29Q8N6K0 151 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 THAP8Q8NA92 274 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 TRAV12-2A0A075B6T6 113 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 SYNJ2BPP57105 145 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 TMEM95Q3KNT9 176 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 CT83Q5H943 113 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 C9orf139Q6ZV77 190 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 LINC00311Q8N616 119 aa9.51□□□□□ -0.89
ERBB2-206ENST00000578373 PHLDA1Q8WV24 401 aaPredicted RBP9.51□□□□□ -0.89
ERBB2-206ENST00000578373 H3BRN7 92 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 ZNF625Q96I27 306 aaPredicted RBP9.5□□□□□ -0.89
ERBB2-206ENST00000578373 LTBP2Q14767 1821 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 NCKAP5O14513 1909 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 H3BRM9 83 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 DTX2Q86UW9 622 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 GTSF1Q8WW33 167 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 UBE2E2Q96LR5 201 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 SIGMAR1Q99720 223 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 C8orf86Q6ZUL3 223 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 DYNAPQ8N1N2 210 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 NCOR1P1Q9H4R4 102 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 OOSP1A8MZH6 123 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 CCL25O15444 150 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 SPINK13Q1W4C9 94 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 BVES-AS1Q5T3Y7 98 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 SPXQ9BT56 116 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 YAE1D1Q9NRH1 226 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 KLK9Q9UKQ9 250 aa9.5□□□□□ -0.89
ERBB2-206ENST00000578373 TRBV7-9A0A0J9YWB2 115 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 PRSS46E5RG02 174 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 DUSP14O95147 198 aaKnown RBP9.49□□□□□ -0.89
ERBB2-206ENST00000578373 LTAP01374 205 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 ADAMTSL5Q6ZMM2 481 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 ZNF747Q9BV97 191 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 SZT2Q5T011 3432 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 TSPAN13O95857 204 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 DEFB1P60022 68 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 C2orf66Q6UXQ4 117 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 COPS9Q8WXC6 57 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 ZNF503Q96F45 646 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 SHISA9B4DS77 424 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 SMPXQ9UHP9 88 aa9.49□□□□□ -0.89
ERBB2-206ENST00000578373 COX8AP10176 69 aa9.48□□□□□ -0.89
ERBB2-206ENST00000578373 FOXE3Q13461 319 aa9.48□□□□□ -0.89
ERBB2-206ENST00000578373 PIP4P2Q8N4L2 257 aa9.48□□□□□ -0.89
ERBB2-206ENST00000578373 TRBV7-1A0A0A6YYK4 115 aa9.48□□□□□ -0.89
ERBB2-206ENST00000578373 SLC25A16P16260 332 aa9.48□□□□□ -0.89
ERBB2-206ENST00000578373 ANKRD39Q53RE8 183 aa9.48□□□□□ -0.89
ERBB2-206ENST00000578373 ESDP10768 282 aa9.48□□□□□ -0.89
ERBB2-206ENST00000578373 K7ENP7 123 aa9.48□□□□□ -0.89
ERBB2-206ENST00000578373 P0C879 139 aa9.47□□□□□ -0.89
ERBB2-206ENST00000578373 GP9P14770 177 aa9.47□□□□□ -0.89
ERBB2-206ENST00000578373 PLNP26678 52 aa9.47□□□□□ -0.89
ERBB2-206ENST00000578373 ANXA2RQ3ZCQ2 193 aa9.47□□□□□ -0.89
ERBB2-206ENST00000578373 SPOCK3Q9BQ16 436 aa9.47□□□□□ -0.89
ERBB2-206ENST00000578373 AGPAT4-IT1Q9H0P7 198 aa9.47□□□□□ -0.89
ERBB2-206ENST00000578373 K7EIM0 57 aa9.47□□□□□ -0.89
ERBB2-206ENST00000578373 TP53TG1Q9Y2A0 90 aa9.47□□□□□ -0.89
ERBB2-206ENST00000578373 IGHV3-16A0A0C4DH30 117 aa9.46□□□□□ -0.89
ERBB2-206ENST00000578373 A8MWV9 139 aa9.46□□□□□ -0.89
ERBB2-206ENST00000578373 PAX2Q02962 417 aa9.46□□□□□ -0.89
ERBB2-206ENST00000578373 LINC00322Q6ZN03 302 aaPredicted RBP9.46□□□□□ -0.89
ERBB2-206ENST00000578373 PIP4P1Q86T03 277 aa9.46□□□□□ -0.89
ERBB2-206ENST00000578373 IGF2BP2-AS1Q96M15 143 aa9.46□□□□□ -0.89
ERBB2-206ENST00000578373 ERG28Q9UKR5 140 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms