RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 A8MWL6 223 aa13.82□□□□□ -0.2
PRKCA-203ENST00000578063 CA1P00915 261 aaPredicted RBP13.82□□□□□ -0.2
PRKCA-203ENST00000578063 CRISP2P16562 243 aa13.82□□□□□ -0.2
PRKCA-203ENST00000578063 RAB5AP20339 215 aa13.82□□□□□ -0.2
PRKCA-203ENST00000578063 ZNF80P51504 273 aaPredicted RBP13.82□□□□□ -0.2
PRKCA-203ENST00000578063 FAM3BP58499 235 aaPredicted RBP13.82□□□□□ -0.2
PRKCA-203ENST00000578063 GDF5OSQ5U4N7 250 aa13.82□□□□□ -0.2
PRKCA-203ENST00000578063 OR2D3Q8NGH3 330 aa13.82□□□□□ -0.2
PRKCA-203ENST00000578063 TMEM158Q8WZ71 300 aa13.82□□□□□ -0.2
PRKCA-203ENST00000578063 FAM210BQ96KR6 192 aa13.82□□□□□ -0.2
PRKCA-203ENST00000578063 INSL3P51460 131 aa13.81□□□□□ -0.2
PRKCA-203ENST00000578063 ZFAND2AQ8N6M9 145 aa13.81□□□□□ -0.2
PRKCA-203ENST00000578063 CD33P20138 364 aa13.81□□□□□ -0.2
PRKCA-203ENST00000578063 APRG1Q8IVJ8 170 aa13.81□□□□□ -0.2
PRKCA-203ENST00000578063 C3orf56Q8N813 242 aa13.81□□□□□ -0.2
PRKCA-203ENST00000578063 GFRA4Q9GZZ7 299 aa13.81□□□□□ -0.2
PRKCA-203ENST00000578063 FAM231BA6NCW3 169 aa13.8□□□□□ -0.2
PRKCA-203ENST00000578063 HLA-DRB4P13762 266 aa13.8□□□□□ -0.2
PRKCA-203ENST00000578063 CMC4P56277 68 aaPredicted RBP13.8□□□□□ -0.2
PRKCA-203ENST00000578063 C12orf54Q6X4T0 127 aa13.8□□□□□ -0.2
PRKCA-203ENST00000578063 HLA-DRB4X5D2U9 266 aa13.8□□□□□ -0.2
PRKCA-203ENST00000578063 XKRY2A2RUG3 117 aa13.79□□□□□ -0.2
PRKCA-203ENST00000578063 LEPP41159 167 aa13.79□□□□□ -0.2
PRKCA-203ENST00000578063 TCL1AP56279 114 aa13.79□□□□□ -0.2
PRKCA-203ENST00000578063 RPL19P84098 196 aaKnown RBP13.79□□□□□ -0.2
PRKCA-203ENST00000578063 C9orf66Q5T8R8 295 aa13.79□□□□□ -0.2
PRKCA-203ENST00000578063 NEU1Q99519 415 aa13.79□□□□□ -0.2
PRKCA-203ENST00000578063 NAT8BQ9UHF3 227 aa13.79□□□□□ -0.2
PRKCA-203ENST00000578063 TMEM189A5PLL7 270 aa13.78□□□□□ -0.2
PRKCA-203ENST00000578063 GPX1P07203 203 aa13.78□□□□□ -0.2
PRKCA-203ENST00000578063 RPS20P60866 119 aaKnown RBP13.78□□□□□ -0.2
PRKCA-203ENST00000578063 ODF3L2Q3SX64 289 aa13.78□□□□□ -0.2
PRKCA-203ENST00000578063 SHISA2Q6UWI4 295 aa13.78□□□□□ -0.2
PRKCA-203ENST00000578063 KLLNB2CW77 178 aa13.78□□□□□ -0.2
PRKCA-203ENST00000578063 TYMSP04818 313 aa13.78□□□□□ -0.2
PRKCA-203ENST00000578063 ACTL10Q5JWF8 245 aa13.78□□□□□ -0.2
PRKCA-203ENST00000578063 PRR9Q5T870 116 aa13.78□□□□□ -0.2
PRKCA-203ENST00000578063 FAM110AQ9BQ89 295 aa13.78□□□□□ -0.2
PRKCA-203ENST00000578063 MCRIP2Q9BUT9 160 aaKnown RBP13.78□□□□□ -0.2
PRKCA-203ENST00000578063 TRAV21A0A0B4J279 112 aa13.77□□□□□ -0.21
PRKCA-203ENST00000578063 KNCNA6PVL3 124 aa13.77□□□□□ -0.21
PRKCA-203ENST00000578063 A8MTW9 85 aa13.77□□□□□ -0.21
PRKCA-203ENST00000578063 HIGD1CA8MV81 97 aa13.77□□□□□ -0.21
PRKCA-203ENST00000578063 OR11H12B2RN74 326 aa13.77□□□□□ -0.21
PRKCA-203ENST00000578063 TSPOP30536 169 aa13.77□□□□□ -0.21
PRKCA-203ENST00000578063 LINC01559Q495D7 138 aa13.77□□□□□ -0.21
PRKCA-203ENST00000578063 FBN1P35555 2871 aaKnown RBP13.77□□□□□ -0.21
PRKCA-203ENST00000578063 H3BMM0 161 aa13.76□□□□□ -0.21
PRKCA-203ENST00000578063 BEAN1Q3B7T3 259 aa13.76□□□□□ -0.21
PRKCA-203ENST00000578063 Q6AWC8 147 aa13.76□□□□□ -0.21
PRKCA-203ENST00000578063 NUP35Q8NFH5 326 aa13.76□□□□□ -0.21
PRKCA-203ENST00000578063 J3KRW8 73 aa13.76□□□□□ -0.21
PRKCA-203ENST00000578063 ORM1P02763 201 aa13.76□□□□□ -0.21
PRKCA-203ENST00000578063 RPS10P46783 165 aaKnown RBP13.76□□□□□ -0.21
PRKCA-203ENST00000578063 WFDC9Q8NEX5 89 aa13.76□□□□□ -0.21
PRKCA-203ENST00000578063 GTSF1Q8WW33 167 aa13.76□□□□□ -0.21
PRKCA-203ENST00000578063 SRD5A3Q9H8P0 318 aa13.76□□□□□ -0.21
PRKCA-203ENST00000578063 IGKV3-20P01619 116 aa13.75□□□□□ -0.21
PRKCA-203ENST00000578063 CDKN1BP46527 198 aa13.75□□□□□ -0.21
PRKCA-203ENST00000578063 FOXA3P55318 350 aaPredicted RBP13.75□□□□□ -0.21
PRKCA-203ENST00000578063 AMTNQ6UX39 209 aa13.75□□□□□ -0.21
PRKCA-203ENST00000578063 RNASE4P34096 147 aaKnown RBP13.74□□□□□ -0.21
PRKCA-203ENST00000578063 CLUHP3Q96NS8 147 aa13.74□□□□□ -0.21
PRKCA-203ENST00000578063 TMA7Q9Y2S6 64 aaKnown RBP13.74□□□□□ -0.21
PRKCA-203ENST00000578063 TMSB15BA0A087X1C1 80 aa13.73□□□□□ -0.21
PRKCA-203ENST00000578063 GZMBP10144 247 aa13.73□□□□□ -0.21
PRKCA-203ENST00000578063 ZNF124Q15973 351 aa13.73□□□□□ -0.21
PRKCA-203ENST00000578063 SPATA3Q8NHX4 192 aa13.73□□□□□ -0.21
PRKCA-203ENST00000578063 C7orf71A4D174 169 aa13.73□□□□□ -0.21
PRKCA-203ENST00000578063 ATP5L2Q7Z4Y8 100 aa13.73□□□□□ -0.21
PRKCA-203ENST00000578063 C11orf21Q9P2W6 132 aa13.73□□□□□ -0.21
PRKCA-203ENST00000578063 IGKV3D-20A0A0C4DH25 116 aa13.72□□□□□ -0.21
PRKCA-203ENST00000578063 KIR3DS1Q14943 382 aa13.72□□□□□ -0.21
PRKCA-203ENST00000578063 SPINK13Q1W4C9 94 aa13.72□□□□□ -0.21
PRKCA-203ENST00000578063 COX19Q49B96 90 aa13.72□□□□□ -0.21
PRKCA-203ENST00000578063 RASL11AQ6T310 242 aa13.72□□□□□ -0.21
PRKCA-203ENST00000578063 PGLYRP4Q96LB8 373 aa13.72□□□□□ -0.21
PRKCA-203ENST00000578063 C1orf196B1AJZ1 125 aa13.71□□□□□ -0.21
PRKCA-203ENST00000578063 M0R2Z0 102 aa13.71□□□□□ -0.21
PRKCA-203ENST00000578063 SPINK4O60575 86 aa13.71□□□□□ -0.21
PRKCA-203ENST00000578063 GFI1BQ5VTD9 330 aa13.71□□□□□ -0.21
PRKCA-203ENST00000578063 MRPL54Q6P161 138 aaKnown RBP13.71□□□□□ -0.21
PRKCA-203ENST00000578063 STHQ8IWL8 128 aa13.71□□□□□ -0.21
PRKCA-203ENST00000578063 CD7P09564 240 aa13.7□□□□□ -0.22
PRKCA-203ENST00000578063 RBMY1BA6NDE4 496 aaKnown RBP13.7□□□□□ -0.22
PRKCA-203ENST00000578063 RBMY1EA6NEQ0 496 aaKnown RBP13.7□□□□□ -0.22
PRKCA-203ENST00000578063 RBMY1DP0C7P1 496 aaKnown RBP13.7□□□□□ -0.22
PRKCA-203ENST00000578063 WDR73Q6P4I2 378 aa13.7□□□□□ -0.22
PRKCA-203ENST00000578063 Q6ZQT7 251 aa13.7□□□□□ -0.22
PRKCA-203ENST00000578063 FER1L6-AS1Q8NA97 138 aa13.7□□□□□ -0.22
PRKCA-203ENST00000578063 C19orf73Q9NVV2 129 aa13.7□□□□□ -0.22
PRKCA-203ENST00000578063 NAGKQ9UJ70 344 aa13.7□□□□□ -0.22
PRKCA-203ENST00000578063 WIPF1O43516 503 aa13.69□□□□□ -0.22
PRKCA-203ENST00000578063 IGLC6P0CF74 106 aa13.69□□□□□ -0.22
PRKCA-203ENST00000578063 TRPT1Q86TN4 253 aaKnown RBP13.69□□□□□ -0.22
PRKCA-203ENST00000578063 BORCS7Q96B45 105 aa13.69□□□□□ -0.22
PRKCA-203ENST00000578063 VWFP04275 2813 aa13.69□□□□□ -0.22
PRKCA-203ENST00000578063 TRAV12-2A0A075B6T6 113 aa13.68□□□□□ -0.22
PRKCA-203ENST00000578063 TRAV12-3A0A0B4J271 114 aa13.68□□□□□ -0.22
PRKCA-203ENST00000578063 A0A1B0GUT8 65 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms