RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 SMAD5-AS1Q9Y6J3 95 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 HRNRQ86YZ3 2850 aaPredicted RBP11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 LY6LH3BQJ8 138 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 SCGB2A1O75556 95 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 CFHR4Q92496 578 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 JMJD8Q96S16 334 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 JKAMPQ9P055 326 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 ZFYVE26Q68DK2 2539 aa11.44□□□□□ -0.58
CUEDC1-206ENST00000577830 TNFRSF6BO95407 300 aa11.43□□□□□ -0.58
CUEDC1-206ENST00000577830 ZFP36P26651 326 aaKnown RBP11.43□□□□□ -0.58
CUEDC1-206ENST00000577830 SFTA2Q6UW10 78 aa11.43□□□□□ -0.58
CUEDC1-206ENST00000577830 MRPS12O15235 138 aaKnown RBP11.43□□□□□ -0.58
CUEDC1-206ENST00000577830 ID1P41134 155 aa11.43□□□□□ -0.58
CUEDC1-206ENST00000577830 NHP2Q9NX24 153 aaKnown RBP11.43□□□□□ -0.58
CUEDC1-206ENST00000577830 SPCS1Q9Y6A9 102 aa11.43□□□□□ -0.58
CUEDC1-206ENST00000577830 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
CUEDC1-206ENST00000577830 ATP6V0E1O15342 81 aa11.43□□□□□ -0.58
CUEDC1-206ENST00000577830 MSRB2Q9Y3D2 182 aa11.43□□□□□ -0.58
CUEDC1-206ENST00000577830 CENPEQ02224 2701 aa11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 F8W735 103 aaPredicted RBP11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 EFNA4P52798 201 aa11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 ZC2HC1BQ5TFG8 222 aa11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 GTF2H5Q6ZYL4 71 aa11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 H3BVH4 76 aa11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 TMEM78Q5T7P6 136 aa11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 OR2K2Q8NGT1 345 aa11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 ACACBO00763 2458 aa11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 TRAV40A0A0B4J280 105 aa11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 PRTN3P24158 256 aa11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 S100A4P26447 101 aaKnown RBP11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 CDKN1BP46527 198 aa11.42□□□□□ -0.58
CUEDC1-206ENST00000577830 USP9YO00507 2555 aaPredicted RBP11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 OVOL3O00110 214 aa11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 IGHV3-11P01762 117 aa11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 SRD5A1P18405 259 aa11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 ATP5J2P56134 94 aa11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 HERV-K104P63124 156 aa11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 IGHV7-81A0A0B4J1V7 117 aa11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 MGPP08493 103 aa11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 HOXB4P17483 251 aaPredicted RBP11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 CCDC144NLQ6NUI1 221 aa11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 DTX2Q86UW9 622 aa11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 C16orf92Q96LL3 132 aa11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 RNF5Q99942 180 aa11.41□□□□□ -0.58
CUEDC1-206ENST00000577830 PDE6HQ13956 83 aa11.4□□□□□ -0.58
CUEDC1-206ENST00000577830 LY6EQ16553 131 aa11.4□□□□□ -0.58
CUEDC1-206ENST00000577830 SEC11AP67812 179 aa11.4□□□□□ -0.58
CUEDC1-206ENST00000577830 LGALS9BQ3B8N2 356 aa11.4□□□□□ -0.58
CUEDC1-206ENST00000577830 LGALS9CQ6DKI2 356 aa11.4□□□□□ -0.58
CUEDC1-206ENST00000577830 PKD1L2Q7Z442 2459 aa11.4□□□□□ -0.58
CUEDC1-206ENST00000577830 TMEM8BA6NDV4 472 aa11.4□□□□□ -0.59
CUEDC1-206ENST00000577830 IGF1P05019 195 aa11.4□□□□□ -0.59
CUEDC1-206ENST00000577830 ZNF48Q96MX3 618 aaPredicted RBP11.4□□□□□ -0.59
CUEDC1-206ENST00000577830 AGPAT4-IT1Q9H0P7 198 aa11.4□□□□□ -0.59
CUEDC1-206ENST00000577830 FXYD2P54710 66 aa11.39□□□□□ -0.59
CUEDC1-206ENST00000577830 HSD52Q0P140 79 aa11.39□□□□□ -0.59
CUEDC1-206ENST00000577830 FGF6P10767 208 aa11.39□□□□□ -0.59
CUEDC1-206ENST00000577830 BRD3OSQ6XYD6 125 aa11.39□□□□□ -0.59
CUEDC1-206ENST00000577830 OR11H6Q8NGC7 330 aa11.39□□□□□ -0.59
CUEDC1-206ENST00000577830 MYOZ3Q8TDC0 251 aa11.39□□□□□ -0.59
CUEDC1-206ENST00000577830 SMIM17P0DL12 118 aa11.38□□□□□ -0.59
CUEDC1-206ENST00000577830 SAA4P35542 130 aa11.38□□□□□ -0.59
CUEDC1-206ENST00000577830 RPS20P60866 119 aaKnown RBP11.38□□□□□ -0.59
CUEDC1-206ENST00000577830 ZNF493Q6ZR52 646 aa11.38□□□□□ -0.59
CUEDC1-206ENST00000577830 C11orf21Q9P2W6 132 aa11.38□□□□□ -0.59
CUEDC1-206ENST00000577830 C9orf118A6NHY6 69 aa11.38□□□□□ -0.59
CUEDC1-206ENST00000577830 FABP2P12104 132 aa11.38□□□□□ -0.59
CUEDC1-206ENST00000577830 MRPL35Q9NZE8 188 aaKnown RBP11.38□□□□□ -0.59
CUEDC1-206ENST00000577830 POLQO75417 2590 aa11.38□□□□□ -0.59
CUEDC1-206ENST00000577830 IGKCP01834 107 aa11.37□□□□□ -0.59
CUEDC1-206ENST00000577830 NPBQ8NG41 125 aa11.37□□□□□ -0.59
CUEDC1-206ENST00000577830 IGHG4P01861 327 aa11.37□□□□□ -0.59
CUEDC1-206ENST00000577830 EMP1P54849 157 aa11.37□□□□□ -0.59
CUEDC1-206ENST00000577830 NEGR1Q7Z3B1 354 aa11.37□□□□□ -0.59
CUEDC1-206ENST00000577830 FAM208BQ5VWN6 2430 aa11.37□□□□□ -0.59
CUEDC1-206ENST00000577830 SMIM13P0DJ93 91 aa11.37□□□□□ -0.59
CUEDC1-206ENST00000577830 TTC9CQ8N5M4 171 aa11.37□□□□□ -0.59
CUEDC1-206ENST00000577830 RNF185Q96GF1 192 aa11.37□□□□□ -0.59
CUEDC1-206ENST00000577830 METTL26Q96S19 204 aa11.37□□□□□ -0.59
CUEDC1-206ENST00000577830 IGKV3D-20A0A0C4DH25 116 aa11.36□□□□□ -0.59
CUEDC1-206ENST00000577830 SAMD5Q5TGI4 173 aa11.36□□□□□ -0.59
CUEDC1-206ENST00000577830 F6UB75 175 aa11.36□□□□□ -0.59
CUEDC1-206ENST00000577830 Q8N9W7 124 aa11.36□□□□□ -0.59
CUEDC1-206ENST00000577830 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
CUEDC1-206ENST00000577830 AGRNO00468 2067 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 ARL3P36405 182 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 LY6G5BQ8NDX9 201 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 ZNF479Q96JC4 524 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 HIST1H4GQ99525 98 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 SRSF8Q9BRL6 282 aaKnown RBP11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 AMTNQ6UX39 209 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 H3BRM9 83 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 BUB3O43684 328 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 IGKV3-20P01619 116 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 KLRB1Q12918 225 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 C14orf178Q8N769 122 aaPredicted RBP11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 BPESC1Q9GZL8 116 aa11.35□□□□□ -0.59
CUEDC1-206ENST00000577830 TRBV6-1A0A0K0K1D8 114 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms