RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 OR10AG1Q8NH19 301 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 VGLL1Q99990 258 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 HIF1ANQ9NWT6 349 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 IGHV7-81A0A0B4J1V7 117 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 CTSGP08311 255 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 SAA4P35542 130 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 ERCC8Q13216 396 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 VAMP3Q15836 100 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 SAPCD1Q5SSQ6 148 aa4.15□□□□□ -1.74
VAPA-203ENST00000577539 MRPL52Q86TS9 123 aaKnown RBP4.15□□□□□ -1.74
VAPA-203ENST00000577539 ODF3BA8MYP8 253 aa4.15□□□□□ -1.75
VAPA-203ENST00000577539 MPV17L2Q567V2 206 aa4.15□□□□□ -1.75
VAPA-203ENST00000577539 TMEM219Q86XT9 240 aa4.15□□□□□ -1.75
VAPA-203ENST00000577539 RNF182Q8N6D2 247 aa4.15□□□□□ -1.75
VAPA-203ENST00000577539 FER1L6-AS1Q8NA97 138 aa4.15□□□□□ -1.75
VAPA-203ENST00000577539 BPESC1Q9GZL8 116 aa4.15□□□□□ -1.75
VAPA-203ENST00000577539 A0A1W2PPR1 153 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 TMEM89A2RUT3 159 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 ATP6V0E1O15342 81 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 EGR2P11161 476 aaPredicted RBP4.14□□□□□ -1.75
VAPA-203ENST00000577539 PDE6HQ13956 83 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 FAM106AQ4KMX7 169 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 MINOS1Q5TGZ0 78 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 Q6AWC8 147 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 ORMDL3Q8N138 153 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 TTC9CQ8N5M4 171 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 MINOS1-NBL1R4GNA1 71 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 RELNP78509 3460 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 DOPEY2Q9Y3R5 2298 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 ACACBO00763 2458 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 IGKV3-7A0A075B6H7 116 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 Q8N9W7 124 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 C18orf15Q96N68 181 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 SPAG8Q99932 426 aaPredicted RBP4.14□□□□□ -1.75
VAPA-203ENST00000577539 MRPS16Q9Y3D3 137 aaKnown RBP4.14□□□□□ -1.75
VAPA-203ENST00000577539 LINC01548A6NM66 108 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 MRPS12O15235 138 aaKnown RBP4.14□□□□□ -1.75
VAPA-203ENST00000577539 S100A7P31151 101 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 LOXL1Q08397 574 aaPredicted RBP4.14□□□□□ -1.75
VAPA-203ENST00000577539 C11orf71Q6IPW1 123 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 ZNF738Q8NE65 137 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 DPF1Q92782 380 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 ST20Q9HBF5 79 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 YAE1D1Q9NRH1 226 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 SELENOKQ9Y6D0 94 aa4.14□□□□□ -1.75
VAPA-203ENST00000577539 A0A087X0K7 114 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 A0A1B0GW15 77 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 OOSP1A8MZH6 123 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 PRAC2D3DTV9 90 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 ZNF80P51504 273 aaPredicted RBP4.13□□□□□ -1.75
VAPA-203ENST00000577539 MRPL51Q4U2R6 128 aaKnown RBP4.13□□□□□ -1.75
VAPA-203ENST00000577539 FAM208BQ5VWN6 2430 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 FAM104BQ5XKR9 115 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 SIGLEC8Q9NYZ4 499 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 MSRB1Q9NZV6 116 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 UFC1Q9Y3C8 167 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 EVI2AP22794 236 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 LY6EQ16553 131 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 BRD3OSQ6XYD6 125 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 IGHV2-70DA0A0C4DH43 119 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 TRBV6-1A0A0K0K1D8 114 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 FABP5P3A8MUU1 101 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 EFNA4P52798 201 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 CACNG7P62955 275 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 SYT8Q8NBV8 401 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 METTL26Q96S19 204 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 ZNF747Q9BV97 191 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 SMAD5-AS1Q9Y6J3 95 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 ZZEF1O43149 2961 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 PIEZO1Q92508 2521 aa4.13□□□□□ -1.75
VAPA-203ENST00000577539 NPYP01303 97 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 UQCRFS1P47985 274 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 UBE2E1P51965 193 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 RPS20P60866 119 aaKnown RBP4.12□□□□□ -1.75
VAPA-203ENST00000577539 TMEM78Q5T7P6 136 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 IL17RELQ6ZVW7 336 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 OR4C5Q8NGB2 326 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 EEF1AKMT3Q96AZ1 226 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 GEMIN7Q9H840 131 aaKnown RBP4.12□□□□□ -1.75
VAPA-203ENST00000577539 FAM159AQ6UWV7 190 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 PRSS57Q6UWY2 283 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 USP9YO00507 2555 aaPredicted RBP4.12□□□□□ -1.75
VAPA-203ENST00000577539 NPFFO15130 113 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 IGHV3-11P01762 117 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 TRGV3P03979 118 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 PRSS1P07477 247 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 NMUP48645 174 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 ATP5G2Q06055 141 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 GAGE1Q13065 139 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 SMIM15Q7Z3B0 74 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 Q8N6K4 173 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 ZNF502Q8TBZ5 544 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 MAP1LC3AQ9H492 121 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 COX11Q9Y6N1 276 aa4.12□□□□□ -1.75
VAPA-203ENST00000577539 HBDP02042 147 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 GATA1P15976 413 aaPredicted RBP4.11□□□□□ -1.75
VAPA-203ENST00000577539 GNLYP22749 145 aa4.11□□□□□ -1.75
VAPA-203ENST00000577539 C12orf54Q6X4T0 127 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms