RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 RASL11AQ6T310 242 aa10.75□□□□□ -0.69
TVP23A-207ENST00000573360 C18orf65Q6ZTR6 163 aa10.75□□□□□ -0.69
TVP23A-207ENST00000573360 WFDC12Q8WWY7 111 aa10.75□□□□□ -0.69
TVP23A-207ENST00000573360 Q6YL49 198 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 MAP1LC3CQ9BXW4 147 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 TMEM191AQ9H0A3 160 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 ARMS2P0C7Q2 107 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 GP9P14770 177 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 FAM162BQ5T6X4 162 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 OR8A1Q8NGG7 326 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 METTL26Q96S19 204 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 MAST4O15021 2626 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 NUDT3O95989 172 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 ATP5L2Q7Z4Y8 100 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 Q86TA4 180 aa10.74□□□□□ -0.69
TVP23A-207ENST00000573360 WIPF2Q8TF74 440 aaPredicted RBP10.73□□□□□ -0.69
TVP23A-207ENST00000573360 SHANK2-AS3Q9BTD1 123 aa10.73□□□□□ -0.69
TVP23A-207ENST00000573360 OTORQ9NRC9 128 aa10.73□□□□□ -0.69
TVP23A-207ENST00000573360 RNF151Q2KHN1 245 aa10.73□□□□□ -0.69
TVP23A-207ENST00000573360 IGHV1-24A0A0C4DH33 117 aa10.73□□□□□ -0.69
TVP23A-207ENST00000573360 A0A1B0GUT8 65 aa10.73□□□□□ -0.69
TVP23A-207ENST00000573360 INAFM1C9JVW0 142 aa10.73□□□□□ -0.69
TVP23A-207ENST00000573360 SPATA12Q7Z6I5 190 aa10.73□□□□□ -0.69
TVP23A-207ENST00000573360 ZNF738Q8NE65 137 aa10.73□□□□□ -0.69
TVP23A-207ENST00000573360 AAMDCQ9H7C9 122 aa10.73□□□□□ -0.69
TVP23A-207ENST00000573360 IGKV2-40A0A087WW87 121 aaPredicted RBP10.72□□□□□ -0.69
TVP23A-207ENST00000573360 DNAJC9-AS1A6NH13 148 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 IGKV2D-40P01614 121 aaPredicted RBP10.72□□□□□ -0.69
TVP23A-207ENST00000573360 SYNJ2BPP57105 145 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 RIGQ13278 110 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 MPV17L2Q567V2 206 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 Q8TAT8 98 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 SYS1-DBNDD2H3BUS1 97 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 CSN1S1P47710 185 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 PSG8Q9UQ74 426 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 LTAP01374 205 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 OR5AL1P0C617 328 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 OR4C5Q8NGB2 326 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 GLMPQ8WWB7 406 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 RNF24Q9Y225 148 aa10.72□□□□□ -0.69
TVP23A-207ENST00000573360 C2orf70A6NJV1 201 aa10.71□□□□□ -0.69
TVP23A-207ENST00000573360 LY6G6DO95868 133 aa10.71□□□□□ -0.69
TVP23A-207ENST00000573360 MYCNOSP40205 109 aa10.71□□□□□ -0.69
TVP23A-207ENST00000573360 LOC102724200A0A096LPH7 203 aaPredicted RBP10.71□□□□□ -0.69
TVP23A-207ENST00000573360 ZC2HC1AQ96GY0 325 aa10.71□□□□□ -0.69
TVP23A-207ENST00000573360 AP5S1Q9NUS5 200 aa10.71□□□□□ -0.69
TVP23A-207ENST00000573360 TRBV7-1A0A0A6YYK4 115 aa10.71□□□□□ -0.7
TVP23A-207ENST00000573360 IGKV3-20P01619 116 aa10.71□□□□□ -0.7
TVP23A-207ENST00000573360 PPIFP30405 207 aaKnown RBP10.71□□□□□ -0.7
TVP23A-207ENST00000573360 SLC25A34Q6PIV7 304 aa10.71□□□□□ -0.7
TVP23A-207ENST00000573360 FOXC2Q99958 501 aa10.71□□□□□ -0.7
TVP23A-207ENST00000573360 ESM1Q9NQ30 184 aa10.71□□□□□ -0.7
TVP23A-207ENST00000573360 RELQ04864 619 aaPredicted RBP10.7□□□□□ -0.7
TVP23A-207ENST00000573360 KLF5Q13887 457 aaPredicted RBP10.7□□□□□ -0.7
TVP23A-207ENST00000573360 DPF1Q92782 380 aa10.7□□□□□ -0.7
TVP23A-207ENST00000573360 MLST8Q9BVC4 326 aa10.7□□□□□ -0.7
TVP23A-207ENST00000573360 NSD1Q96L73 2696 aaPredicted RBP10.7□□□□□ -0.7
TVP23A-207ENST00000573360 A0A1B0GXF2 115 aa10.7□□□□□ -0.7
TVP23A-207ENST00000573360 H3BRN7 92 aa10.7□□□□□ -0.7
TVP23A-207ENST00000573360 RPL7P18124 248 aaKnown RBP10.7□□□□□ -0.7
TVP23A-207ENST00000573360 MRPL52Q86TS9 123 aaKnown RBP10.7□□□□□ -0.7
TVP23A-207ENST00000573360 URB1-AS1Q96HZ7 61 aa10.7□□□□□ -0.7
TVP23A-207ENST00000573360 C8orf49Q96NF6 230 aa10.7□□□□□ -0.7
TVP23A-207ENST00000573360 KLF12Q9Y4X4 402 aa10.7□□□□□ -0.7
TVP23A-207ENST00000573360 A0A0G2JLM5 398 aa10.7□□□□□ -0.7
TVP23A-207ENST00000573360 IGF1P05019 195 aa10.7□□□□□ -0.7
TVP23A-207ENST00000573360 C16orf92Q96LL3 132 aa10.69□□□□□ -0.7
TVP23A-207ENST00000573360 HSPB8Q9UJY1 196 aa10.69□□□□□ -0.7
TVP23A-207ENST00000573360 TMEM189A5PLL7 270 aa10.69□□□□□ -0.7
TVP23A-207ENST00000573360 C19orf71A6NCJ1 209 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 ZNF702PQ9H963 129 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 PEF1Q9UBV8 284 aaKnown RBP10.68□□□□□ -0.7
TVP23A-207ENST00000573360 CBY1Q9Y3M2 126 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 TRBV19A0A075B6N1 114 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 A0A087X0K7 114 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 GAGE1Q13065 139 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 ERCC8Q13216 396 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 S100A7AQ86SG5 101 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 KLHL30-AS1Q8NEE0 82 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 ZNF492Q9P255 531 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 TMEM213A2RRL7 107 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 FAM223BA6NKX1 122 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 ORM1P02763 201 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 FAM223AQ8IWN6 122 aa10.68□□□□□ -0.7
TVP23A-207ENST00000573360 ZNF418Q8TF45 676 aaPredicted RBP10.68□□□□□ -0.7
TVP23A-207ENST00000573360 CHCHD1Q96BP2 118 aaKnown RBP10.68□□□□□ -0.7
TVP23A-207ENST00000573360 WI2-2373I1.2A0A1W2PRP0 233 aa10.67□□□□□ -0.7
TVP23A-207ENST00000573360 CCL25O15444 150 aa10.67□□□□□ -0.7
TVP23A-207ENST00000573360 MRPS16Q9Y3D3 137 aaKnown RBP10.67□□□□□ -0.7
TVP23A-207ENST00000573360 SLURP1P55000 103 aa10.67□□□□□ -0.7
TVP23A-207ENST00000573360 RHPN1-AS1Q9BWJ2 59 aa10.67□□□□□ -0.7
TVP23A-207ENST00000573360 SMKR1H3BMG3 65 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 FAM106AQ4KMX7 169 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 LYZL1Q6UWQ5 148 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 C8orf86Q6ZUL3 223 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 ZNF414Q96IQ9 312 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 IFI27P40305 119 aaPredicted RBP10.66□□□□□ -0.7
TVP23A-207ENST00000573360 TWIST1Q15672 202 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 NSUN5P1Q3KNT7 163 aa10.66□□□□□ -0.7
TVP23A-207ENST00000573360 Q6ZSV7 163 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms