RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 MPC2O95563 127 aa8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 IFNA5P01569 189 aa8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 M6PRP20645 277 aa8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 RNASE4P34096 147 aaKnown RBP8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 BTN1A1Q13410 526 aa8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 C1orf134Q5TEV5 83 aa8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 C9orf47Q6ZRZ4 202 aa8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 FXYD5Q96DB9 178 aa8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 GNPNAT1Q96EK6 184 aaPredicted RBP8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 AGPAT4-IT1Q9H0P7 198 aa8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 HSPB11Q9Y547 144 aa8.65□□□□□ -1.02
CTDNEP1-205ENST00000570828 GPX1P07203 203 aa8.64□□□□□ -1.03
CTDNEP1-205ENST00000570828 CRISP2P16562 243 aa8.64□□□□□ -1.03
CTDNEP1-205ENST00000570828 UBE2L3P68036 154 aaKnown RBP8.64□□□□□ -1.03
CTDNEP1-205ENST00000570828 CD300CQ08708 224 aa8.64□□□□□ -1.03
CTDNEP1-205ENST00000570828 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
CTDNEP1-205ENST00000570828 FFAR4Q5NUL3 377 aa8.64□□□□□ -1.03
CTDNEP1-205ENST00000570828 EIF4E3Q8N5X7 224 aaKnown RBP8.64□□□□□ -1.03
CTDNEP1-205ENST00000570828 SCGB1C1Q8TD33 95 aa8.64□□□□□ -1.03
CTDNEP1-205ENST00000570828 PHYHIPLQ96FC7 376 aa8.64□□□□□ -1.03
CTDNEP1-205ENST00000570828 FAM19A4Q96LR4 140 aa8.64□□□□□ -1.03
CTDNEP1-205ENST00000570828 TRGV2A0A075B6R0 118 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 A0A0J9YY99 117 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 NMBP08949 121 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 RPL12P30050 165 aaKnown RBP8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 CSN1S1P47710 185 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 TAS2R45P59539 299 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 KHDC3LQ587J8 217 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 Q6ZTI0 123 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 ZNRF2Q8NHG8 242 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 RXFP4Q8TDU9 374 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 VGLL1Q99990 258 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 LINC00467Q9BRT7 94 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 SMIM3Q9BZL3 60 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 TMPRSS5Q9H3S3 457 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 GSN-AS1Q9NRJ2 163 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 MBD2Q9UBB5 411 aa8.63□□□□□ -1.03
CTDNEP1-205ENST00000570828 TRGV1A0A0A0MS02 117 aa8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 NBDYA0A0U1RRE5 68 aa8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 ZNF324O75467 553 aaPredicted RBP8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 HOXA5P20719 270 aa8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 ZNF138P52744 262 aa8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 RANP62826 216 aaKnown RBP8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 ANXA2RQ3ZCQ2 193 aa8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 SSX7Q7RTT5 188 aa8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 ZFAND2AQ8N6M9 145 aa8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 C11orf72Q8NBR9 251 aa8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 Q8TAT8 98 aa8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 ZNF503Q96F45 646 aa8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 LINC00588Q9Y4M8 146 aa8.62□□□□□ -1.03
CTDNEP1-205ENST00000570828 KIAA1109Q2LD37 5005 aa8.61□□□□□ -1.03
CTDNEP1-205ENST00000570828 TRBV7-9A0A0J9YWB2 115 aa8.61□□□□□ -1.03
CTDNEP1-205ENST00000570828 TCL1AP56279 114 aa8.61□□□□□ -1.03
CTDNEP1-205ENST00000570828 IBA57Q5T440 356 aaKnown RBP8.61□□□□□ -1.03
CTDNEP1-205ENST00000570828 PRR9Q5T870 116 aa8.61□□□□□ -1.03
CTDNEP1-205ENST00000570828 LYPD1Q8N2G4 141 aa8.61□□□□□ -1.03
CTDNEP1-205ENST00000570828 Q9H3A6 140 aa8.61□□□□□ -1.03
CTDNEP1-205ENST00000570828 ZNF492Q9P255 531 aa8.61□□□□□ -1.03
CTDNEP1-205ENST00000570828 DNAH11Q96DT5 4516 aa8.61□□□□□ -1.03
CTDNEP1-205ENST00000570828 IGHV1OR15-1A0A075B7D0 117 aa8.6□□□□□ -1.03
CTDNEP1-205ENST00000570828 RBAKDNA6NC62 111 aa8.6□□□□□ -1.03
CTDNEP1-205ENST00000570828 H3BNG1 76 aa8.6□□□□□ -1.03
CTDNEP1-205ENST00000570828 C18orf15Q96N68 181 aa8.6□□□□□ -1.03
CTDNEP1-205ENST00000570828 KLF12Q9Y4X4 402 aa8.6□□□□□ -1.03
CTDNEP1-205ENST00000570828 NACAE9PAV3 2078 aa8.59□□□□□ -1.03
CTDNEP1-205ENST00000570828 ACOT6Q3I5F7 207 aaPredicted RBP8.59□□□□□ -1.03
CTDNEP1-205ENST00000570828 TTC32Q5I0X7 151 aa8.59□□□□□ -1.03
CTDNEP1-205ENST00000570828 C6orf223Q8N319 242 aa8.59□□□□□ -1.03
CTDNEP1-205ENST00000570828 HYLS1Q96M11 299 aa8.59□□□□□ -1.03
CTDNEP1-205ENST00000570828 ALG5Q9Y673 324 aa8.59□□□□□ -1.03
CTDNEP1-205ENST00000570828 PKD1P98161 4303 aa8.59□□□□□ -1.03
CTDNEP1-205ENST00000570828 DYNC1H1Q14204 4646 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 A0A1W2PPV4 95 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 SPINK4O60575 86 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 MED14OSP0DP75 135 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 ZNF415Q09FC8 603 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 ZNF266Q14584 549 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 FAM74A1Q5RGS3 127 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 PQLC2Q6ZP29 291 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 CMTM2Q8TAZ6 248 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 Q9H8V8 135 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 WFDC1Q9HC57 220 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 OTORQ9NRC9 128 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 TP53TG3Q9ULZ0 132 aa8.58□□□□□ -1.04
CTDNEP1-205ENST00000570828 DIRC3C9JPN6 131 aa8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 EIF3GO75821 320 aaKnown RBP eCLIP8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 PTTG1O95997 202 aa8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 RAB2AP61019 212 aa8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 MUC21Q5SSG8 566 aa8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 Q6ZQT7 251 aa8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 ST6GAL2Q96JF0 529 aa8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 UPK3BQ9BT76 320 aa8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 MRPL16Q9NX20 251 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 RPH3ALQ9UNE2 315 aa8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 MRPS16Q9Y3D3 137 aaKnown RBP8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 LENEPQ9Y5L5 61 aa8.57□□□□□ -1.04
CTDNEP1-205ENST00000570828 IGHV3-53P01767 116 aa8.56□□□□□ -1.04
CTDNEP1-205ENST00000570828 ESRGQ1W209 222 aa8.56□□□□□ -1.04
CTDNEP1-205ENST00000570828 VSIG2Q96IQ7 327 aa8.56□□□□□ -1.04
CTDNEP1-205ENST00000570828 TRGV11A0A075B6L2 103 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms