RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 ASIPP42127 132 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 OR8A1Q8NGG7 326 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 OR2K2Q8NGT1 345 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 ZNF462Q96JM2 2506 aa4.62□□□□□ -1.67
CYLD-216ENST00000569891 FAM181BA6NEQ2 426 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 SMIM17P0DL12 118 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 FBLN7Q53RD9 439 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 RAX2Q96IS3 184 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 SGK494Q96LW2 274 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 C17orf77Q96MU5 243 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 IGHV3OR16-8A0A075B7F1 116 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 IGHV3-49A0A0A0MS15 119 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 TRAV8-1A0A0A6YYK1 113 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 OR5AL1P0C617 328 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 HILS1P60008 231 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 FAM159AQ6UWV7 190 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 CHCHD1Q96BP2 118 aaKnown RBP4.61□□□□□ -1.67
CYLD-216ENST00000569891 ZC2HC1AQ96GY0 325 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 IGHV3OR16-13A0A075B7E8 117 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 IGHV3-74A0A0B4J1X5 117 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 SYNJ2BPP57105 145 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 NUTF2P61970 127 aaKnown RBP4.61□□□□□ -1.67
CYLD-216ENST00000569891 FOXI2Q6ZQN5 318 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 TMEM136Q6ZRR5 245 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 FA2HQ7L5A8 372 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 LINC01549A6NIU2 74 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 SPINK4O60575 86 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 SPANXN1Q5VSR9 72 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 KRTAP1-3Q8IUG1 177 aa4.61□□□□□ -1.67
CYLD-216ENST00000569891 SPAG8Q99932 426 aaPredicted RBP4.61□□□□□ -1.67
CYLD-216ENST00000569891 TSTD3H0UI37 97 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 IGLV2-11P01706 119 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 FABP4P15090 132 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 SRIP30626 198 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 TWIST1Q15672 202 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 LCNL1Q6ZST4 164 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 SMAD5-AS1Q9Y6J3 95 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 TRGV11A0A075B6L2 103 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 C2orf70A6NJV1 201 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 TCTEX1D4Q5JR98 221 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 OR11H1Q8NG94 326 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 OR10D4PQ8NGN7 298 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 OR9G4Q8NGQ1 327 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 C12orf57Q99622 126 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 Q6ZSV7 163 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 WFDC3Q8IUB2 231 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 ORMDL3Q8N138 153 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 HIST3H2BBQ8N257 126 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 GPR61Q9BZJ8 451 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 AGPAT4-IT1Q9H0P7 198 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 HSPB8Q9UJY1 196 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 MED13LQ71F56 2210 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 IGHV4OR15-8A0A075B7B6 117 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 A0A087WW49 117 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 CTRLP40313 264 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 KLF5Q13887 457 aaPredicted RBP4.6□□□□□ -1.67
CYLD-216ENST00000569891 TMEM95Q3KNT9 176 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 PSMG4Q5JS54 123 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 UNQ9165/PRO28630Q6UXU0 137 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 C20orf144Q9BQM9 153 aa4.6□□□□□ -1.67
CYLD-216ENST00000569891 PRSS3P2Q8NHM4 247 aa4.59□□□□□ -1.67
CYLD-216ENST00000569891 VGLL1Q99990 258 aa4.59□□□□□ -1.67
CYLD-216ENST00000569891 PHLDA3Q9Y5J5 127 aa4.59□□□□□ -1.67
CYLD-216ENST00000569891 AMTP48728 403 aa4.59□□□□□ -1.67
CYLD-216ENST00000569891 LINC00518Q8N0U6 118 aa4.59□□□□□ -1.67
CYLD-216ENST00000569891 MS4A6AQ9H2W1 248 aa4.59□□□□□ -1.67
CYLD-216ENST00000569891 ZMAT5Q9UDW3 170 aaKnown RBP4.59□□□□□ -1.67
CYLD-216ENST00000569891 HELZ2Q9BYK8 2649 aaKnown RBP4.59□□□□□ -1.67
CYLD-216ENST00000569891 MYO18BQ8IUG5 2567 aa4.59□□□□□ -1.67
CYLD-216ENST00000569891 TMEM213A2RRL7 107 aa4.59□□□□□ -1.68
CYLD-216ENST00000569891 PF4P02776 101 aa4.59□□□□□ -1.68
CYLD-216ENST00000569891 GATD1Q8NB37 220 aa4.59□□□□□ -1.68
CYLD-216ENST00000569891 MAP1LC3AQ9H492 121 aa4.59□□□□□ -1.68
CYLD-216ENST00000569891 SIGLEC8Q9NYZ4 499 aa4.59□□□□□ -1.68
CYLD-216ENST00000569891 IGKV3-7A0A075B6H7 116 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 A0A1B0GXF2 115 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 TCAPO15273 167 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 TRBV12-3P01733 135 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 ESDP10768 282 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 C8orf49Q96NF6 230 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 AP1S3Q96PC3 154 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 TMEM191AQ9H0A3 160 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 NAGKQ9UJ70 344 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 SPG11Q96JI7 2443 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 TMSB15BA0A087X1C1 80 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 LOC102724200A0A096LPH7 203 aaPredicted RBP4.58□□□□□ -1.68
CYLD-216ENST00000569891 ZNF705FA8MVS1 300 aaPredicted RBP4.58□□□□□ -1.68
CYLD-216ENST00000569891 HSBP1L1C9JCN9 74 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 K7EQG2 157 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 CCL24O00175 119 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 PHOX2AO14813 284 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 CA1P00915 261 aaPredicted RBP4.58□□□□□ -1.68
CYLD-216ENST00000569891 CKS2P33552 79 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 RNASEKQ6P5S7 137 aaKnown RBP4.58□□□□□ -1.68
CYLD-216ENST00000569891 LYZL1Q6UWQ5 148 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 ZNF493Q6ZR52 646 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 RNF182Q8N6D2 247 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 MCRIP2Q9BUT9 160 aaKnown RBP4.58□□□□□ -1.68
CYLD-216ENST00000569891 SCGB1D1O95968 90 aa4.58□□□□□ -1.68
CYLD-216ENST00000569891 NDUFA11Q86Y39 141 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms