RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 MT-ND6P03923 174 aa16.92■□□□□ 0.3
VCPKMT-205ENST00000569518 CSN3P07498 182 aa16.92■□□□□ 0.3
VCPKMT-205ENST00000569518 WFDC3Q8IUB2 231 aa16.92■□□□□ 0.3
VCPKMT-205ENST00000569518 MRPL18Q9H0U6 180 aaKnown RBP16.92■□□□□ 0.3
VCPKMT-205ENST00000569518 UBE2CO00762 179 aa16.91■□□□□ 0.3
VCPKMT-205ENST00000569518 CRLF1O75462 422 aa16.91■□□□□ 0.3
VCPKMT-205ENST00000569518 SRSF2Q01130 221 aaKnown RBP16.91■□□□□ 0.3
VCPKMT-205ENST00000569518 PGLYRP4Q96LB8 373 aa16.91■□□□□ 0.3
VCPKMT-205ENST00000569518 TMEM189A5PLL7 270 aa16.91■□□□□ 0.3
VCPKMT-205ENST00000569518 FABP5P3A8MUU1 101 aa16.91■□□□□ 0.3
VCPKMT-205ENST00000569518 F6UB75 175 aa16.91■□□□□ 0.3
VCPKMT-205ENST00000569518 CCL24O00175 119 aa16.91■□□□□ 0.3
VCPKMT-205ENST00000569518 NDUFA6P56556 154 aa16.91■□□□□ 0.3
VCPKMT-205ENST00000569518 FAM19A4Q96LR4 140 aa16.91■□□□□ 0.3
VCPKMT-205ENST00000569518 TFPI2P48307 235 aa16.9■□□□□ 0.3
VCPKMT-205ENST00000569518 HIST1H1AQ02539 215 aaPredicted RBP16.9■□□□□ 0.3
VCPKMT-205ENST00000569518 ZNF575Q86XF7 245 aa16.9■□□□□ 0.3
VCPKMT-205ENST00000569518 GDF5OSQ5U4N7 250 aa16.89■□□□□ 0.29
VCPKMT-205ENST00000569518 ADARB2-AS1A8MUL3 147 aa16.89■□□□□ 0.29
VCPKMT-205ENST00000569518 HLA-DQA1P01909 254 aa16.89■□□□□ 0.29
VCPKMT-205ENST00000569518 ZFAND2AQ8N6M9 145 aa16.89■□□□□ 0.29
VCPKMT-205ENST00000569518 TRBV7-9A0A0J9YWB2 115 aa16.88■□□□□ 0.29
VCPKMT-205ENST00000569518 ZNF688P0C7X2 276 aa16.88■□□□□ 0.29
VCPKMT-205ENST00000569518 SNRPD3P62318 126 aaKnown RBP16.88■□□□□ 0.29
VCPKMT-205ENST00000569518 LINC01559Q495D7 138 aa16.88■□□□□ 0.29
VCPKMT-205ENST00000569518 PRR9Q5T870 116 aa16.88■□□□□ 0.29
VCPKMT-205ENST00000569518 Q6AWC8 147 aa16.88■□□□□ 0.29
VCPKMT-205ENST00000569518 XKRY2A2RUG3 117 aa16.87■□□□□ 0.29
VCPKMT-205ENST00000569518 HOXA5P20719 270 aa16.87■□□□□ 0.29
VCPKMT-205ENST00000569518 PSMG4Q5JS54 123 aa16.87■□□□□ 0.29
VCPKMT-205ENST00000569518 RPS20P60866 119 aaKnown RBP16.86■□□□□ 0.29
VCPKMT-205ENST00000569518 RAB4BP61018 213 aa16.86■□□□□ 0.29
VCPKMT-205ENST00000569518 HBBP68871 147 aa16.86■□□□□ 0.29
VCPKMT-205ENST00000569518 COA6Q5JTJ3 125 aaKnown RBP16.86■□□□□ 0.29
VCPKMT-205ENST00000569518 C2CD3Q4AC94 2353 aa16.86■□□□□ 0.29
VCPKMT-205ENST00000569518 TMSB15BA0A087X1C1 80 aa16.86■□□□□ 0.29
VCPKMT-205ENST00000569518 TRAV2A0A0B4J234 112 aa16.86■□□□□ 0.29
VCPKMT-205ENST00000569518 APRG1Q8IVJ8 170 aa16.86■□□□□ 0.29
VCPKMT-205ENST00000569518 C11orf21Q9P2W6 132 aa16.86■□□□□ 0.29
VCPKMT-205ENST00000569518 CRISP2P16562 243 aa16.85■□□□□ 0.29
VCPKMT-205ENST00000569518 PAFAH1B2P68402 229 aa16.85■□□□□ 0.29
VCPKMT-205ENST00000569518 TMEM61Q8N0U2 210 aa16.85■□□□□ 0.29
VCPKMT-205ENST00000569518 DEFB114Q30KQ6 69 aa16.84■□□□□ 0.29
VCPKMT-205ENST00000569518 F8P00451 2351 aa16.84■□□□□ 0.29
VCPKMT-205ENST00000569518 A0A1B0GUT8 65 aa16.84■□□□□ 0.29
VCPKMT-205ENST00000569518 ORM1P02763 201 aa16.84■□□□□ 0.29
VCPKMT-205ENST00000569518 IGLC6P0CF74 106 aa16.84■□□□□ 0.29
VCPKMT-205ENST00000569518 CAMPP49913 170 aa16.84■□□□□ 0.29
VCPKMT-205ENST00000569518 KRTAP10-3P60369 221 aa16.84■□□□□ 0.29
VCPKMT-205ENST00000569518 SLAQ13239 276 aa16.84■□□□□ 0.29
VCPKMT-205ENST00000569518 IGKV3D-20A0A0C4DH25 116 aa16.83■□□□□ 0.28
VCPKMT-205ENST00000569518 A0A0J9YX75 114 aa16.83■□□□□ 0.28
VCPKMT-205ENST00000569518 ARMS2P0C7Q2 107 aa16.83■□□□□ 0.28
VCPKMT-205ENST00000569518 GFI1BQ5VTD9 330 aa16.83■□□□□ 0.28
VCPKMT-205ENST00000569518 DYNLRB2Q8TF09 96 aa16.83■□□□□ 0.28
VCPKMT-205ENST00000569518 CTRLP40313 264 aa16.82■□□□□ 0.28
VCPKMT-205ENST00000569518 Q6ZQT7 251 aa16.82■□□□□ 0.28
VCPKMT-205ENST00000569518 SIGLEC8Q9NYZ4 499 aa16.82■□□□□ 0.28
VCPKMT-205ENST00000569518 APCSP02743 223 aa16.82■□□□□ 0.28
VCPKMT-205ENST00000569518 BAHCC1Q9P281 2608 aa16.81■□□□□ 0.28
VCPKMT-205ENST00000569518 IFITM10A6NMD0 228 aa16.81■□□□□ 0.28
VCPKMT-205ENST00000569518 LYZL1Q6UWQ5 148 aa16.81■□□□□ 0.28
VCPKMT-205ENST00000569518 ODF3Q96PU9 254 aa16.81■□□□□ 0.28
VCPKMT-205ENST00000569518 WNK1Q9H4A3 2382 aa16.8■□□□□ 0.28
VCPKMT-205ENST00000569518 KLLNB2CW77 178 aa16.8■□□□□ 0.28
VCPKMT-205ENST00000569518 CD300EQ496F6 205 aaPredicted RBP16.8■□□□□ 0.28
VCPKMT-205ENST00000569518 HIST3H2BBQ8N257 126 aa16.8■□□□□ 0.28
VCPKMT-205ENST00000569518 FER1L6-AS1Q8NA97 138 aa16.8■□□□□ 0.28
VCPKMT-205ENST00000569518 GATD1Q8NB37 220 aa16.8■□□□□ 0.28
VCPKMT-205ENST00000569518 TPPP3Q9BW30 176 aa16.8■□□□□ 0.28
VCPKMT-205ENST00000569518 SSBP4Q9BWG4 385 aaPredicted RBP16.8■□□□□ 0.28
VCPKMT-205ENST00000569518 A0A1B0GW15 77 aa16.8■□□□□ 0.28
VCPKMT-205ENST00000569518 RIGQ13278 110 aa16.8■□□□□ 0.28
VCPKMT-205ENST00000569518 KIAA1644Q3SXP7 199 aa16.8■□□□□ 0.28
VCPKMT-205ENST00000569518 GPX1P07203 203 aa16.79■□□□□ 0.28
VCPKMT-205ENST00000569518 CD33P20138 364 aa16.79■□□□□ 0.28
VCPKMT-205ENST00000569518 KIR3DS1Q14943 382 aa16.79■□□□□ 0.28
VCPKMT-205ENST00000569518 FOXI2Q6ZQN5 318 aa16.79■□□□□ 0.28
VCPKMT-205ENST00000569518 A0A1B0GUS0 222 aa16.78■□□□□ 0.28
VCPKMT-205ENST00000569518 GRIFINA4D1Z8 144 aa16.78■□□□□ 0.28
VCPKMT-205ENST00000569518 J3KRW8 73 aa16.78■□□□□ 0.28
VCPKMT-205ENST00000569518 EBLN2Q6P2I7 272 aa16.78■□□□□ 0.28
VCPKMT-205ENST00000569518 NDUFA11Q86Y39 141 aa16.78■□□□□ 0.28
VCPKMT-205ENST00000569518 SORL1Q92673 2214 aa16.78■□□□□ 0.28
VCPKMT-205ENST00000569518 TRAV25A0A0B4J276 109 aa16.77■□□□□ 0.28
VCPKMT-205ENST00000569518 TRAV21A0A0B4J279 112 aa16.77■□□□□ 0.28
VCPKMT-205ENST00000569518 NSUN5P1Q3KNT7 163 aa16.77■□□□□ 0.28
VCPKMT-205ENST00000569518 CNFNQ9BYD5 112 aa16.77■□□□□ 0.28
VCPKMT-205ENST00000569518 BORCS7Q96B45 105 aa16.77■□□□□ 0.27
VCPKMT-205ENST00000569518 SPAG8Q99932 426 aaPredicted RBP16.77■□□□□ 0.27
VCPKMT-205ENST00000569518 S100A8P05109 93 aa16.76■□□□□ 0.27
VCPKMT-205ENST00000569518 RNASE4P34096 147 aaKnown RBP16.76■□□□□ 0.27
VCPKMT-205ENST00000569518 AKR1D1P51857 326 aa16.76■□□□□ 0.27
VCPKMT-205ENST00000569518 TP53TG3Q9ULZ0 132 aa16.76■□□□□ 0.27
VCPKMT-205ENST00000569518 ZNF256Q9Y2P7 627 aaPredicted RBP16.76■□□□□ 0.27
VCPKMT-205ENST00000569518 DUSP14O95147 198 aaKnown RBP16.75■□□□□ 0.27
VCPKMT-205ENST00000569518 SRIP30626 198 aa16.75■□□□□ 0.27
VCPKMT-205ENST00000569518 Q0VG73 95 aa16.75■□□□□ 0.27
VCPKMT-205ENST00000569518 PRR31Q5SQ13 230 aa16.75■□□□□ 0.27
VCPKMT-205ENST00000569518 AGRNO00468 2067 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms