RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 KIR3DS1Q14943 382 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 FAM222AQ5U5X8 452 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 C1orf158Q8N1D5 194 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 IGF2BP2-AS1Q96M15 143 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 LINC00477Q96M19 166 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 ODF3Q96PU9 254 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 TMEM208Q9BTX3 173 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 EPDR1Q9UM22 224 aa9.19□□□□□ -0.94
TSC2-220ENST00000568238 RBAKDNA6NC62 111 aa9.18□□□□□ -0.94
TSC2-220ENST00000568238 CRXO43186 299 aaPredicted RBP9.18□□□□□ -0.94
TSC2-220ENST00000568238 P0DMU3 169 aa9.18□□□□□ -0.94
TSC2-220ENST00000568238 FAM231AP0DMU4 169 aa9.18□□□□□ -0.94
TSC2-220ENST00000568238 FAM231CP0DMU5 169 aa9.18□□□□□ -0.94
TSC2-220ENST00000568238 CDKN1BP46527 198 aa9.18□□□□□ -0.94
TSC2-220ENST00000568238 PPT1P50897 306 aa9.18□□□□□ -0.94
TSC2-220ENST00000568238 RRN3P1Q2M238 152 aa9.18□□□□□ -0.94
TSC2-220ENST00000568238 SGK494Q96LW2 274 aa9.18□□□□□ -0.94
TSC2-220ENST00000568238 NIPSNAP3BQ9BS92 247 aa9.18□□□□□ -0.94
TSC2-220ENST00000568238 NKX6-2Q9C056 277 aaPredicted RBP9.18□□□□□ -0.94
TSC2-220ENST00000568238 ZNF492Q9P255 531 aa9.18□□□□□ -0.94
TSC2-220ENST00000568238 K7EQM0 130 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 PEX7O00628 323 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 BLOC1S1P78537 153 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 GFI1BQ5VTD9 330 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 TEX261Q6UWH6 196 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 ARL6IP6Q8N6S5 226 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 CYB561D1Q8N8Q1 229 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 FAM19A4Q96LR4 140 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 ATG101Q9BSB4 218 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 MANBALQ9NQG1 85 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 ARL2-SNX15V9GYD0 113 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 PKD1P98161 4303 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 HERC2O95714 4834 aa9.17□□□□□ -0.94
TSC2-220ENST00000568238 TRAV34A0A0B4J273 112 aa9.16□□□□□ -0.94
TSC2-220ENST00000568238 SERTM2A0A1B0GWG4 89 aa9.16□□□□□ -0.94
TSC2-220ENST00000568238 IFNA1P01562 189 aa9.16□□□□□ -0.94
TSC2-220ENST00000568238 HTN3P15516 51 aa9.16□□□□□ -0.94
TSC2-220ENST00000568238 RNASE4P34096 147 aaKnown RBP9.16□□□□□ -0.94
TSC2-220ENST00000568238 BTN1A1Q13410 526 aa9.16□□□□□ -0.94
TSC2-220ENST00000568238 CCDC28AQ8IWP9 274 aa9.16□□□□□ -0.94
TSC2-220ENST00000568238 POM121L12Q8N7R1 296 aa9.16□□□□□ -0.94
TSC2-220ENST00000568238 ZNF680Q8NEM1 530 aa9.16□□□□□ -0.94
TSC2-220ENST00000568238 PCNPQ8WW12 178 aaKnown RBP9.16□□□□□ -0.94
TSC2-220ENST00000568238 FAM210BQ96KR6 192 aa9.16□□□□□ -0.94
TSC2-220ENST00000568238 LINC00479Q96M42 142 aa9.16□□□□□ -0.94
TSC2-220ENST00000568238 TRAV12-3A0A0B4J271 114 aa9.15□□□□□ -0.94
TSC2-220ENST00000568238 SCO2A0A1W2PP80 73 aa9.15□□□□□ -0.94
TSC2-220ENST00000568238 C7orf71A4D174 169 aa9.15□□□□□ -0.94
TSC2-220ENST00000568238 GPX1P07203 203 aa9.15□□□□□ -0.94
TSC2-220ENST00000568238 CRISP2P16562 243 aa9.15□□□□□ -0.94
TSC2-220ENST00000568238 DAD1P61803 113 aa9.15□□□□□ -0.94
TSC2-220ENST00000568238 PRR9Q5T870 116 aa9.15□□□□□ -0.94
TSC2-220ENST00000568238 ZFAND2AQ8N6M9 145 aa9.15□□□□□ -0.94
TSC2-220ENST00000568238 HIST1H2BAQ96A08 127 aa9.15□□□□□ -0.94
TSC2-220ENST00000568238 PSG8Q9UQ74 426 aa9.15□□□□□ -0.94
TSC2-220ENST00000568238 KLLNB2CW77 178 aa9.14□□□□□ -0.95
TSC2-220ENST00000568238 F6UZH7 168 aa9.14□□□□□ -0.95
TSC2-220ENST00000568238 IGLV2-11P01706 119 aa9.14□□□□□ -0.95
TSC2-220ENST00000568238 BCL2P10415 239 aa9.14□□□□□ -0.95
TSC2-220ENST00000568238 FLI1Q01543 452 aaPredicted RBP9.14□□□□□ -0.95
TSC2-220ENST00000568238 PRNTQ86SH4 94 aa9.14□□□□□ -0.95
TSC2-220ENST00000568238 TMEM75Q8N9X5 138 aa9.14□□□□□ -0.95
TSC2-220ENST00000568238 TVP23CQ96ET8 276 aa9.14□□□□□ -0.95
TSC2-220ENST00000568238 LINC01587Q99440 93 aa9.14□□□□□ -0.95
TSC2-220ENST00000568238 TCEAL7Q9BRU2 100 aa9.14□□□□□ -0.95
TSC2-220ENST00000568238 TRBV7-9A0A0J9YWB2 115 aa9.13□□□□□ -0.95
TSC2-220ENST00000568238 ZNF705GA8MUZ8 300 aaPredicted RBP9.13□□□□□ -0.95
TSC2-220ENST00000568238 PRM2P04554 102 aa9.13□□□□□ -0.95
TSC2-220ENST00000568238 NMBP08949 121 aa9.13□□□□□ -0.95
TSC2-220ENST00000568238 HTN1P15515 57 aa9.13□□□□□ -0.95
TSC2-220ENST00000568238 AKR1C3P42330 323 aa9.13□□□□□ -0.95
TSC2-220ENST00000568238 Q86TA4 180 aa9.13□□□□□ -0.95
TSC2-220ENST00000568238 UBE2DNLQ8IWF7 75 aa9.13□□□□□ -0.95
TSC2-220ENST00000568238 NDFIP1Q9BT67 221 aa9.13□□□□□ -0.95
TSC2-220ENST00000568238 TREM1Q9NP99 234 aa9.13□□□□□ -0.95
TSC2-220ENST00000568238 LENEPQ9Y5L5 61 aa9.13□□□□□ -0.95
TSC2-220ENST00000568238 LYRM9A8MSI8 78 aa9.12□□□□□ -0.95
TSC2-220ENST00000568238 UBE2G1P62253 170 aa9.12□□□□□ -0.95
TSC2-220ENST00000568238 MEF2BQ02080 365 aaPredicted RBP9.12□□□□□ -0.95
TSC2-220ENST00000568238 TMEM88Q6PEY1 159 aa9.12□□□□□ -0.95
TSC2-220ENST00000568238 Q6ZQT7 251 aa9.12□□□□□ -0.95
TSC2-220ENST00000568238 LINC00336Q6ZUF6 198 aa9.12□□□□□ -0.95
TSC2-220ENST00000568238 TMEM256Q8N2U0 113 aa9.12□□□□□ -0.95
TSC2-220ENST00000568238 FMC1Q96HJ9 113 aa9.12□□□□□ -0.95
TSC2-220ENST00000568238 C8orf49Q96NF6 230 aa9.12□□□□□ -0.95
TSC2-220ENST00000568238 NACAE9PAV3 2078 aa9.12□□□□□ -0.95
TSC2-220ENST00000568238 FBLL1A6NHQ2 334 aaKnown RBP9.11□□□□□ -0.95
TSC2-220ENST00000568238 H7BYZ3 331 aa9.11□□□□□ -0.95
TSC2-220ENST00000568238 LYPD6BQ8NI32 183 aa9.11□□□□□ -0.95
TSC2-220ENST00000568238 C20orf144Q9BQM9 153 aa9.11□□□□□ -0.95
TSC2-220ENST00000568238 VAX2Q9UIW0 290 aa9.11□□□□□ -0.95
TSC2-220ENST00000568238 DYNC1H1Q14204 4646 aaKnown RBP9.11□□□□□ -0.95
TSC2-220ENST00000568238 DNAH11Q96DT5 4516 aa9.1□□□□□ -0.95
TSC2-220ENST00000568238 KIAA1109Q2LD37 5005 aa9.1□□□□□ -0.95
TSC2-220ENST00000568238 M0R2N4 97 aa9.1□□□□□ -0.95
TSC2-220ENST00000568238 ZNF324O75467 553 aaPredicted RBP9.1□□□□□ -0.95
TSC2-220ENST00000568238 AZU1P20160 251 aa9.1□□□□□ -0.95
TSC2-220ENST00000568238 TAS2R60P59551 318 aa9.1□□□□□ -0.95
TSC2-220ENST00000568238 TXNDC17Q9BRA2 123 aa9.1□□□□□ -0.95
TSC2-220ENST00000568238 NAGKQ9UJ70 344 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms