RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 BLNKQ8WV28 456 aa7.71□□□□□ -1.18
CLK3-222ENST00000568232 PCNPQ8WW12 178 aaKnown RBP7.71□□□□□ -1.18
CLK3-222ENST00000568232 LOC100131303A0A0U1RQF7 123 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 C7orf71A4D174 169 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 IFNA7P01567 189 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 IGHV3-30P01768 117 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 IGHV3-33P01772 117 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 IGHV3-30-3P0DP02 117 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 IGHV3-30-5P0DP03 117 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 AKR1C1Q04828 323 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 BTN1A1Q13410 526 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 ODF1Q14990 250 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 PATE2Q6UY27 113 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 Q6ZQT7 251 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 CYP2G1PQ6ZSU1 146 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 C9orf62Q8N4C0 152 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 MITD1Q8WV92 249 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 ZNF479Q96JC4 524 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 SEC22CQ9BRL7 303 aa7.7□□□□□ -1.18
CLK3-222ENST00000568232 GAS8-AS1O95177 125 aa7.69□□□□□ -1.18
CLK3-222ENST00000568232 LINC00869P0C866 280 aa7.69□□□□□ -1.18
CLK3-222ENST00000568232 IFITM2Q01629 132 aa7.69□□□□□ -1.18
CLK3-222ENST00000568232 LCN15Q6UWW0 184 aa7.69□□□□□ -1.18
CLK3-222ENST00000568232 ACOT7LQ6ZUV0 252 aa7.69□□□□□ -1.18
CLK3-222ENST00000568232 SLC7A5P1Q8MH63 180 aa7.69□□□□□ -1.18
CLK3-222ENST00000568232 ARL6IP6Q8N6S5 226 aa7.69□□□□□ -1.18
CLK3-222ENST00000568232 ODF3Q96PU9 254 aa7.69□□□□□ -1.18
CLK3-222ENST00000568232 SLC50A1Q9BRV3 221 aa7.69□□□□□ -1.18
CLK3-222ENST00000568232 RBFOX3A6NFN3 312 aa7.68□□□□□ -1.18
CLK3-222ENST00000568232 SLC25A5P05141 298 aaKnown RBP7.68□□□□□ -1.18
CLK3-222ENST00000568232 AKR1C4P17516 323 aa7.68□□□□□ -1.18
CLK3-222ENST00000568232 CXCL2P19875 107 aa7.68□□□□□ -1.18
CLK3-222ENST00000568232 RNASE4P34096 147 aaKnown RBP7.68□□□□□ -1.18
CLK3-222ENST00000568232 PLP1P60201 277 aa7.68□□□□□ -1.18
CLK3-222ENST00000568232 RAB14P61106 215 aa7.68□□□□□ -1.18
CLK3-222ENST00000568232 ERCC8Q13216 396 aa7.68□□□□□ -1.18
CLK3-222ENST00000568232 ACOT6Q3I5F7 207 aaPredicted RBP7.68□□□□□ -1.18
CLK3-222ENST00000568232 BAALCQ8WXS3 180 aa7.68□□□□□ -1.18
CLK3-222ENST00000568232 TXNDC17Q9BRA2 123 aa7.68□□□□□ -1.18
CLK3-222ENST00000568232 ARL6Q9H0F7 186 aa7.68□□□□□ -1.18
CLK3-222ENST00000568232 TMA7Q9Y2S6 64 aaKnown RBP7.68□□□□□ -1.18
CLK3-222ENST00000568232 KCNIP3Q9Y2W7 256 aa7.68□□□□□ -1.18
CLK3-222ENST00000568232 A0A0D9SG52 128 aa7.67□□□□□ -1.18
CLK3-222ENST00000568232 C9orf170A2RU37 121 aa7.67□□□□□ -1.18
CLK3-222ENST00000568232 SMCO3A2RU48 225 aa7.67□□□□□ -1.18
CLK3-222ENST00000568232 L7N2F9 121 aa7.67□□□□□ -1.18
CLK3-222ENST00000568232 GOSR2O14653 212 aa7.67□□□□□ -1.18
CLK3-222ENST00000568232 ORM1P02763 201 aa7.67□□□□□ -1.18
CLK3-222ENST00000568232 PET100P0DJ07 73 aa7.67□□□□□ -1.18
CLK3-222ENST00000568232 IBA57Q5T440 356 aaKnown RBP7.67□□□□□ -1.18
CLK3-222ENST00000568232 MORN5Q5VZ52 161 aa7.67□□□□□ -1.18
CLK3-222ENST00000568232 TM2D2Q9BX73 214 aa7.67□□□□□ -1.18
CLK3-222ENST00000568232 SLC25A31Q9H0C2 315 aa7.67□□□□□ -1.18
CLK3-222ENST00000568232 KLLNB2CW77 178 aa7.66□□□□□ -1.18
CLK3-222ENST00000568232 WRBO00258 174 aa7.66□□□□□ -1.18
CLK3-222ENST00000568232 MPDU1O75352 247 aa7.66□□□□□ -1.18
CLK3-222ENST00000568232 PITX3O75364 302 aa7.66□□□□□ -1.18
CLK3-222ENST00000568232 SFT2D2O95562 160 aa7.66□□□□□ -1.18
CLK3-222ENST00000568232 S100A11P31949 105 aa7.66□□□□□ -1.18
CLK3-222ENST00000568232 PPT1P50897 306 aa7.66□□□□□ -1.18
CLK3-222ENST00000568232 TEX261Q6UWH6 196 aa7.66□□□□□ -1.18
CLK3-222ENST00000568232 C9orf47Q6ZRZ4 202 aa7.66□□□□□ -1.18
CLK3-222ENST00000568232 NMES1Q9C002 83 aa7.66□□□□□ -1.18
CLK3-222ENST00000568232 ARV1Q9H2C2 271 aa7.66□□□□□ -1.18
CLK3-222ENST00000568232 C9JCJ5 164 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 H3BP45 60 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 H3BQ15 152 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 IGLV2-11P01706 119 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 VAMP1P23763 118 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 SRPXP78539 464 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 PPP1R1AQ13522 171 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 ZNF345Q14585 488 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 LGALSLQ3ZCW2 172 aaPredicted RBP7.65□□□□□ -1.18
CLK3-222ENST00000568232 SMUG1Q53HV7 270 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 OR10J3Q5JRS4 329 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 SPANXN5Q5MJ07 72 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 PRR9Q5T870 116 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 LINC00305Q7Z4B0 112 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 NHLRC2Q8NBF2 726 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 OR10P1Q8NGE3 313 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 THAP6Q8TBB0 222 aa7.65□□□□□ -1.18
CLK3-222ENST00000568232 SAT2Q96F10 170 aaPredicted RBP7.65□□□□□ -1.18
CLK3-222ENST00000568232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.65□□□□□ -1.18
CLK3-222ENST00000568232 TRAV8-6A0A0B4J262 113 aa7.64□□□□□ -1.19
CLK3-222ENST00000568232 H2BFSP57053 126 aa7.64□□□□□ -1.19
CLK3-222ENST00000568232 ID3Q02535 119 aa7.64□□□□□ -1.19
CLK3-222ENST00000568232 OPCMLQ14982 345 aa7.64□□□□□ -1.19
CLK3-222ENST00000568232 TDRG1Q3Y452 100 aa7.64□□□□□ -1.19
CLK3-222ENST00000568232 SLC51BQ86UW2 128 aa7.64□□□□□ -1.19
CLK3-222ENST00000568232 INO80EQ8NBZ0 244 aaPredicted RBP7.64□□□□□ -1.19
CLK3-222ENST00000568232 OR11H4Q8NGC9 324 aa7.64□□□□□ -1.19
CLK3-222ENST00000568232 OR10G4Q8NGN3 311 aa7.64□□□□□ -1.19
CLK3-222ENST00000568232 FAM19A4Q96LR4 140 aa7.64□□□□□ -1.19
CLK3-222ENST00000568232 PXMP4Q9Y6I8 212 aa7.64□□□□□ -1.19
CLK3-222ENST00000568232 IGHV1OR15-1A0A075B7D0 117 aa7.63□□□□□ -1.19
CLK3-222ENST00000568232 SMLR1H3BR10 107 aa7.63□□□□□ -1.19
CLK3-222ENST00000568232 M0R3E3 92 aa7.63□□□□□ -1.19
CLK3-222ENST00000568232 GPX1P07203 203 aa7.63□□□□□ -1.19
CLK3-222ENST00000568232 IGLC2P0DOY2 106 aa7.63□□□□□ -1.19
CLK3-222ENST00000568232 TIRAPP58753 221 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms