RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 DEFA3P59666 94 aa8.46□□□□□ -1.06
GTF3C1-208ENST00000567843 ANXA2RQ3ZCQ2 193 aa8.46□□□□□ -1.06
GTF3C1-208ENST00000567843 ARPC5LQ9BPX5 153 aa8.46□□□□□ -1.06
GTF3C1-208ENST00000567843 Q9H3A6 140 aa8.46□□□□□ -1.06
GTF3C1-208ENST00000567843 A0A096LPF7 62 aa8.45□□□□□ -1.06
GTF3C1-208ENST00000567843 HMGB3O15347 200 aaKnown RBP8.45□□□□□ -1.06
GTF3C1-208ENST00000567843 SPINK4O60575 86 aa8.45□□□□□ -1.06
GTF3C1-208ENST00000567843 CSN1S1P47710 185 aa8.45□□□□□ -1.06
GTF3C1-208ENST00000567843 TCL1AP56279 114 aa8.45□□□□□ -1.06
GTF3C1-208ENST00000567843 LINC00467Q9BRT7 94 aa8.45□□□□□ -1.06
GTF3C1-208ENST00000567843 DNAH5Q8TE73 4624 aa8.44□□□□□ -1.06
GTF3C1-208ENST00000567843 MDFICQ9P1T7 246 aa8.44□□□□□ -1.06
GTF3C1-208ENST00000567843 APOBP04114 4563 aaKnown RBP8.44□□□□□ -1.06
GTF3C1-208ENST00000567843 C16orf90A8MZG2 172 aa8.43□□□□□ -1.06
GTF3C1-208ENST00000567843 PAX4O43316 350 aa8.43□□□□□ -1.06
GTF3C1-208ENST00000567843 NMBP08949 121 aa8.43□□□□□ -1.06
GTF3C1-208ENST00000567843 PET100P0DJ07 73 aa8.43□□□□□ -1.06
GTF3C1-208ENST00000567843 RAB2AP61019 212 aa8.43□□□□□ -1.06
GTF3C1-208ENST00000567843 C8orf49Q96NF6 230 aa8.43□□□□□ -1.06
GTF3C1-208ENST00000567843 NAGKQ9UJ70 344 aa8.43□□□□□ -1.06
GTF3C1-208ENST00000567843 MRPS16Q9Y3D3 137 aaKnown RBP8.43□□□□□ -1.06
GTF3C1-208ENST00000567843 ALG5Q9Y673 324 aa8.43□□□□□ -1.06
GTF3C1-208ENST00000567843 PGPA6NDG6 321 aa8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 DIRC3C9JPN6 131 aa8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 H3BNG1 76 aa8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 SFTA3P0C7M3 94 aa8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 TAS2R45P59539 299 aa8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 GNG5P63218 68 aa8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 ZNF415Q09FC8 603 aa8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 TMEM183BQ1AE95 376 aa8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 KHDC3LQ587J8 217 aa8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 IBA57Q5T440 356 aaKnown RBP8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 TMEM183AQ8IXX5 376 aa8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 ST6GAL2Q96JF0 529 aa8.42□□□□□ -1.06
GTF3C1-208ENST00000567843 A0A1W2PPV4 95 aa8.41□□□□□ -1.06
GTF3C1-208ENST00000567843 ZNF266Q14584 549 aa8.41□□□□□ -1.06
GTF3C1-208ENST00000567843 ACOT6Q3I5F7 207 aaPredicted RBP8.41□□□□□ -1.06
GTF3C1-208ENST00000567843 GOLT1AQ6ZVE7 132 aa8.41□□□□□ -1.06
GTF3C1-208ENST00000567843 LYPD1Q8N2G4 141 aa8.41□□□□□ -1.06
GTF3C1-208ENST00000567843 CMTM2Q8TAZ6 248 aa8.41□□□□□ -1.06
GTF3C1-208ENST00000567843 SGK494Q96LW2 274 aa8.41□□□□□ -1.06
GTF3C1-208ENST00000567843 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
GTF3C1-208ENST00000567843 UPK3BQ9BT76 320 aa8.41□□□□□ -1.06
GTF3C1-208ENST00000567843 OTORQ9NRC9 128 aa8.41□□□□□ -1.06
GTF3C1-208ENST00000567843 TRAV8-1A0A0A6YYK1 113 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 RBAKDNA6NC62 111 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 F6UZH7 168 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 GNRH2O43555 120 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 FHL2Q14192 279 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 TTC32Q5I0X7 151 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 FAM159AQ6UWV7 190 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 SPATA12Q7Z6I5 190 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 HSD17B11Q8NBQ5 300 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 OR10G4Q8NGN3 311 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 OR10G9Q8NGN4 311 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 OR10G7Q8NGN6 311 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 ZNF479Q96JC4 524 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 KRTAP4-5Q9BYR2 181 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 HHLA3Q9XRX5 114 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 ICOSQ9Y6W8 199 aa8.4□□□□□ -1.06
GTF3C1-208ENST00000567843 TRGV4A0A0C4DH28 118 aa8.39□□□□□ -1.07
GTF3C1-208ENST00000567843 NXPH4O95158 308 aa8.39□□□□□ -1.07
GTF3C1-208ENST00000567843 CRYBA4P53673 196 aa8.39□□□□□ -1.07
GTF3C1-208ENST00000567843 TVP23CQ96ET8 276 aa8.39□□□□□ -1.07
GTF3C1-208ENST00000567843 PRO0255Q9UI72 69 aa8.39□□□□□ -1.07
GTF3C1-208ENST00000567843 TNFRSF18Q9Y5U5 241 aa8.39□□□□□ -1.07
GTF3C1-208ENST00000567843 TRBV7-9A0A0J9YWB2 115 aa8.38□□□□□ -1.07
GTF3C1-208ENST00000567843 SIVA1O15304 175 aa8.38□□□□□ -1.07
GTF3C1-208ENST00000567843 ARL14EPLP0DKL9 152 aa8.38□□□□□ -1.07
GTF3C1-208ENST00000567843 LINC00315P59091 139 aa8.38□□□□□ -1.07
GTF3C1-208ENST00000567843 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
GTF3C1-208ENST00000567843 Q5BKY6 102 aa8.38□□□□□ -1.07
GTF3C1-208ENST00000567843 Q6AWC8 147 aa8.38□□□□□ -1.07
GTF3C1-208ENST00000567843 TRGV11A0A075B6L2 103 aa8.37□□□□□ -1.07
GTF3C1-208ENST00000567843 FUSP35637 526 aaKnown RBP eCLIP8.37□□□□□ -1.07
GTF3C1-208ENST00000567843 CDC34P49427 236 aaPredicted RBP8.37□□□□□ -1.07
GTF3C1-208ENST00000567843 FAM74A1Q5RGS3 127 aa8.37□□□□□ -1.07
GTF3C1-208ENST00000567843 LYPD5Q6UWN5 251 aa8.37□□□□□ -1.07
GTF3C1-208ENST00000567843 PQLC2Q6ZP29 291 aa8.37□□□□□ -1.07
GTF3C1-208ENST00000567843 MED28Q9H204 178 aa8.37□□□□□ -1.07
GTF3C1-208ENST00000567843 TREM1Q9NP99 234 aa8.37□□□□□ -1.07
GTF3C1-208ENST00000567843 IGHV3-16A0A0C4DH30 117 aa8.36□□□□□ -1.07
GTF3C1-208ENST00000567843 A0A1W2PPQ1 181 aa8.36□□□□□ -1.07
GTF3C1-208ENST00000567843 ATP6V0CP27449 155 aa8.36□□□□□ -1.07
GTF3C1-208ENST00000567843 MRPL23Q16540 153 aaKnown RBP8.36□□□□□ -1.07
GTF3C1-208ENST00000567843 RAB24Q969Q5 203 aa8.36□□□□□ -1.07
GTF3C1-208ENST00000567843 SH3BGRL3Q9H299 93 aa8.36□□□□□ -1.07
GTF3C1-208ENST00000567843 LENEPQ9Y5L5 61 aa8.36□□□□□ -1.07
GTF3C1-208ENST00000567843 TRAV21A0A0B4J279 112 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 LOC100131303A0A0U1RQF7 123 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 K7EQD1 137 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 TYMSP04818 313 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 GYPEP15421 78 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 SRIP30626 198 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 SLAQ13239 276 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 NEGR1Q7Z3B1 354 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 IQCF2Q8IXL9 164 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 OR4C5Q8NGB2 326 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 TMED6Q8WW62 240 aa8.35□□□□□ -1.07
GTF3C1-208ENST00000567843 RASL10AQ92737 203 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms