RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 MUC4Q99102 2169 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 SMIM27A0A1W2PRY6 76 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 ZNF705GA8MUZ8 300 aaPredicted RBP4.3□□□□□ -1.72
SF3B3-210ENST00000567654 C1orf196B1AJZ1 125 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 GATCO43716 136 aaKnown RBP4.3□□□□□ -1.72
SF3B3-210ENST00000567654 TYMSP04818 313 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 TRGC1P0CF51 173 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 ZNF705DP0CH99 300 aaPredicted RBP4.3□□□□□ -1.72
SF3B3-210ENST00000567654 ZNF705BP0CI00 300 aaPredicted RBP4.3□□□□□ -1.72
SF3B3-210ENST00000567654 GZMBP10144 247 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 CD28P10747 220 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 HOXD3P31249 432 aaPredicted RBP4.3□□□□□ -1.72
SF3B3-210ENST00000567654 SYNJ2BPP57105 145 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 HILS1P60008 231 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 RPEL1Q2QD12 228 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 GDF5OSQ5U4N7 250 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 Q6ZQT7 251 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 S100A7AQ86SG5 101 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 TEX29Q8N6K0 151 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 GTSF1Q8WW33 167 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 IMMP2LQ96T52 175 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 SLC50A1Q9BRV3 221 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 AAMDCQ9H7C9 122 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 SRD5A3Q9H8P0 318 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 ZNF492Q9P255 531 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 RNF24Q9Y225 148 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 PRELID1Q9Y255 219 aa4.3□□□□□ -1.72
SF3B3-210ENST00000567654 HIVEP2P31629 2446 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 C2orf70A6NJV1 201 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 A8MWP6 167 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 F6UB75 175 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 K7EMT4 169 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 HIST1H2BKO60814 126 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 S100A9P06702 114 aaKnown RBP4.29□□□□□ -1.72
SF3B3-210ENST00000567654 HIST1H2BJP06899 126 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 CBLN1P23435 193 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 HIST1H2BOP23527 126 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 S100PP25815 95 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 HIST1H2BBP33778 126 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 CDX1P47902 265 aaPredicted RBP4.29□□□□□ -1.72
SF3B3-210ENST00000567654 HIST1H2BDP58876 126 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 KRTAP10-3P60369 221 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 RAB5BP61020 215 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 SNRPEP62304 92 aaKnown RBP4.29□□□□□ -1.72
SF3B3-210ENST00000567654 HIST1H2BCP62807 126 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 HIST2H2BEQ16778 126 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 ACTL10Q5JWF8 245 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.29□□□□□ -1.72
SF3B3-210ENST00000567654 PRR9Q5T870 116 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 KCNIP4Q6PIL6 250 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 ZNF575Q86XF7 245 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 GBGT1Q8N5D6 347 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 KLHL30-AS1Q8NEE0 82 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 NUP35Q8NFH5 326 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 LINC01006Q8NI28 216 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 HIST1H2BHQ93079 126 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 SMIM12Q96EX1 92 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 GRAMD2BQ96HH9 432 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 HIST1H2BNQ99877 126 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 HIST1H2BMQ99879 126 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 AGPAT4-IT1Q9H0P7 198 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 RPP21Q9H633 154 aaKnown RBP4.29□□□□□ -1.72
SF3B3-210ENST00000567654 C16orf95Q9H693 158 aa4.29□□□□□ -1.72
SF3B3-210ENST00000567654 DAZ1Q9NQZ3 744 aaKnown RBP4.29□□□□□ -1.72
SF3B3-210ENST00000567654 NACAE9PAV3 2078 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 A0A1B0GUS0 222 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 IZUMO1RA6ND01 250 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 C5orf52A6NGY3 159 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 LINC01619G3V211 115 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 LGALS9O00182 355 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 PRYO14603 147 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 SH2D1AO60880 128 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 S100A7P31151 101 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 CSN1S1P47710 185 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 FABP9Q0Z7S8 132 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 KLF5Q13887 457 aaPredicted RBP4.28□□□□□ -1.72
SF3B3-210ENST00000567654 FAM106AQ4KMX7 169 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 GFI1BQ5VTD9 330 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 MRPL54Q6P161 138 aaKnown RBP4.28□□□□□ -1.72
SF3B3-210ENST00000567654 TMEM136Q6ZRR5 245 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 COX8CQ7Z4L0 72 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 ARL6IP6Q8N6S5 226 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 OR11H1Q8NG94 326 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 DCANP1Q8TF63 244 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 C4orf3Q8WVX3 66 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 DLX4Q92988 240 aaPredicted RBP4.28□□□□□ -1.72
SF3B3-210ENST00000567654 CITED2Q99967 270 aaPredicted RBP4.28□□□□□ -1.72
SF3B3-210ENST00000567654 SAV1Q9H4B6 383 aaPredicted RBP4.28□□□□□ -1.72
SF3B3-210ENST00000567654 NRN1Q9NPD7 142 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 ZFP30Q9Y2G7 519 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 UFC1Q9Y3C8 167 aa4.28□□□□□ -1.72
SF3B3-210ENST00000567654 TRAV9-1A0A075B6T8 112 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 TMSB15BA0A087X1C1 80 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 SERTM2A0A1B0GWG4 89 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 A0A1B0GXF2 115 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 A0A1W2PS18 150 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 IFITM10A6NMD0 228 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 HIGD1CA8MV81 97 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 SNURFLB1AK76 121 aa4.27□□□□□ -1.73
SF3B3-210ENST00000567654 F2Z2F3 143 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms