RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 A0A087WX48 190 aa12.13□□□□□ -0.47
COMMD4-215ENST00000566843 A0A1B0GWB2 263 aa12.13□□□□□ -0.47
COMMD4-215ENST00000566843 UCNP55089 124 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 C5orf64Q2M2E5 130 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 IGFL4Q6B9Z1 124 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 DYNAPQ8N1N2 210 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 NRACQ8N912 160 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 MYOZ3Q8TDC0 251 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 SPAG8Q99932 426 aaPredicted RBP12.12□□□□□ -0.47
COMMD4-215ENST00000566843 PRO0461Q9UI25 63 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 MAP1BP46821 2468 aaKnown RBP12.12□□□□□ -0.47
COMMD4-215ENST00000566843 TRBV7-3A0A075B6L6 115 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 RBAKDNA6NC62 111 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 SMAGPQ0VAQ4 97 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 LAGE3Q14657 143 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 RRN3P1Q2M238 152 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 IL17RELQ6ZVW7 336 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 DPM3Q9P2X0 92 aa12.12□□□□□ -0.47
COMMD4-215ENST00000566843 CACNA1AO00555 2505 aa12.11□□□□□ -0.47
COMMD4-215ENST00000566843 LY6G5BQ8NDX9 201 aa12.11□□□□□ -0.47
COMMD4-215ENST00000566843 ARPC1AQ92747 370 aa12.11□□□□□ -0.47
COMMD4-215ENST00000566843 CTSGP08311 255 aa12.11□□□□□ -0.47
COMMD4-215ENST00000566843 ERCC8Q13216 396 aa12.11□□□□□ -0.47
COMMD4-215ENST00000566843 OR11H6Q8NGC7 330 aa12.11□□□□□ -0.47
COMMD4-215ENST00000566843 IGKV3D-20A0A0C4DH25 116 aa12.1□□□□□ -0.47
COMMD4-215ENST00000566843 H3BMG7 143 aa12.1□□□□□ -0.47
COMMD4-215ENST00000566843 K7EMI3 77 aa12.1□□□□□ -0.47
COMMD4-215ENST00000566843 ROS1P08922 2347 aa12.1□□□□□ -0.47
COMMD4-215ENST00000566843 PLNP26678 52 aa12.1□□□□□ -0.47
COMMD4-215ENST00000566843 TRAV12-1A0A0B4J245 112 aa12.09□□□□□ -0.47
COMMD4-215ENST00000566843 B9A039 149 aa12.09□□□□□ -0.47
COMMD4-215ENST00000566843 PRAC2D3DTV9 90 aa12.09□□□□□ -0.47
COMMD4-215ENST00000566843 PPIFP30405 207 aaKnown RBP12.09□□□□□ -0.47
COMMD4-215ENST00000566843 SH2D6Q7Z4S9 175 aa12.09□□□□□ -0.47
COMMD4-215ENST00000566843 Q8NA96 180 aa12.09□□□□□ -0.47
COMMD4-215ENST00000566843 SCGB2A1O75556 95 aa12.09□□□□□ -0.47
COMMD4-215ENST00000566843 TRGV3P03979 118 aa12.09□□□□□ -0.47
COMMD4-215ENST00000566843 ETDBQ3ZM63 59 aa12.09□□□□□ -0.47
COMMD4-215ENST00000566843 GAGE13Q4V321 117 aa12.09□□□□□ -0.47
COMMD4-215ENST00000566843 CCDC144NLQ6NUI1 221 aa12.09□□□□□ -0.47
COMMD4-215ENST00000566843 LYNX1G3V0Z9 82 aa12.08□□□□□ -0.48
COMMD4-215ENST00000566843 PRRG2O14669 202 aa12.08□□□□□ -0.48
COMMD4-215ENST00000566843 LYNX1P0DP58 116 aa12.08□□□□□ -0.48
COMMD4-215ENST00000566843 NDPQ00604 133 aa12.08□□□□□ -0.48
COMMD4-215ENST00000566843 ATP6V0BQ99437 205 aa12.08□□□□□ -0.48
COMMD4-215ENST00000566843 HIST1H4GQ99525 98 aa12.08□□□□□ -0.48
COMMD4-215ENST00000566843 C11orf21Q9P2W6 132 aa12.08□□□□□ -0.48
COMMD4-215ENST00000566843 ONECUT1Q9UBC0 465 aa12.08□□□□□ -0.48
COMMD4-215ENST00000566843 IGHV4-4A0A075B6R2 117 aa12.08□□□□□ -0.48
COMMD4-215ENST00000566843 IGHV3-23P01764 117 aa12.08□□□□□ -0.48
COMMD4-215ENST00000566843 NCBP2LA6PVI3 153 aaKnown RBP12.07□□□□□ -0.48
COMMD4-215ENST00000566843 PRR30Q53SZ7 412 aaPredicted RBP12.07□□□□□ -0.48
COMMD4-215ENST00000566843 PKDREJQ9NTG1 2253 aa12.07□□□□□ -0.48
COMMD4-215ENST00000566843 IGHV7-4-1A0A0J9YVY3 117 aa12.07□□□□□ -0.48
COMMD4-215ENST00000566843 ODF3BA8MYP8 253 aa12.06□□□□□ -0.48
COMMD4-215ENST00000566843 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.06□□□□□ -0.48
COMMD4-215ENST00000566843 H7C1H1 209 aa12.06□□□□□ -0.48
COMMD4-215ENST00000566843 AMTNQ6UX39 209 aa12.06□□□□□ -0.48
COMMD4-215ENST00000566843 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.06□□□□□ -0.48
COMMD4-215ENST00000566843 AGRNO00468 2067 aa12.06□□□□□ -0.48
COMMD4-215ENST00000566843 MYMXA0A1B0GTQ4 84 aa12.06□□□□□ -0.48
COMMD4-215ENST00000566843 F8VRH5 84 aa12.06□□□□□ -0.48
COMMD4-215ENST00000566843 RAB9AP51151 201 aa12.06□□□□□ -0.48
COMMD4-215ENST00000566843 SLC50A1Q9BRV3 221 aa12.06□□□□□ -0.48
COMMD4-215ENST00000566843 AGPAT4-IT1Q9H0P7 198 aa12.05□□□□□ -0.48
COMMD4-215ENST00000566843 TLN1Q9Y490 2541 aaKnown RBP12.04□□□□□ -0.48
COMMD4-215ENST00000566843 EFNA4P52798 201 aa12.04□□□□□ -0.48
COMMD4-215ENST00000566843 HES1Q14469 280 aa12.04□□□□□ -0.48
COMMD4-215ENST00000566843 TCTEX1D4Q5JR98 221 aa12.04□□□□□ -0.48
COMMD4-215ENST00000566843 MORN3Q6PF18 240 aaPredicted RBP12.04□□□□□ -0.48
COMMD4-215ENST00000566843 Q8N6K4 173 aa12.04□□□□□ -0.48
COMMD4-215ENST00000566843 BUB3O43684 328 aa12.04□□□□□ -0.48
COMMD4-215ENST00000566843 ATP6V0E2Q8NHE4 81 aa12.04□□□□□ -0.48
COMMD4-215ENST00000566843 TRAV26-2A0A0B4J265 109 aa12.03□□□□□ -0.48
COMMD4-215ENST00000566843 RNF182Q8N6D2 247 aa12.03□□□□□ -0.48
COMMD4-215ENST00000566843 MRAP2Q96G30 205 aa12.03□□□□□ -0.48
COMMD4-215ENST00000566843 ZFAND3Q9H8U3 227 aa12.03□□□□□ -0.48
COMMD4-215ENST00000566843 OR11H12B2RN74 326 aa12.03□□□□□ -0.48
COMMD4-215ENST00000566843 OR11H1Q8NG94 326 aa12.03□□□□□ -0.48
COMMD4-215ENST00000566843 OR11H2Q8NH07 326 aa12.03□□□□□ -0.48
COMMD4-215ENST00000566843 MRPL53Q96EL3 112 aaKnown RBP12.03□□□□□ -0.48
COMMD4-215ENST00000566843 SMIM2Q9BVW6 85 aa12.03□□□□□ -0.48
COMMD4-215ENST00000566843 M0R1W7 72 aa12.02□□□□□ -0.49
COMMD4-215ENST00000566843 HOXA3O43365 443 aaPredicted RBP12.02□□□□□ -0.49
COMMD4-215ENST00000566843 INSL3P51460 131 aa12.02□□□□□ -0.49
COMMD4-215ENST00000566843 KLRD1Q13241 179 aa12.02□□□□□ -0.49
COMMD4-215ENST00000566843 KLK9Q2XQG4 91 aa12.02□□□□□ -0.49
COMMD4-215ENST00000566843 KLK9Q9UKQ9 250 aa12.02□□□□□ -0.49
COMMD4-215ENST00000566843 ATRXP46100 2492 aa12.02□□□□□ -0.49
COMMD4-215ENST00000566843 LGALS1P09382 135 aaKnown RBP12.02□□□□□ -0.49
COMMD4-215ENST00000566843 SLC25A16P16260 332 aa12.02□□□□□ -0.49
COMMD4-215ENST00000566843 EBI3Q14213 229 aa12.02□□□□□ -0.49
COMMD4-215ENST00000566843 NEXN-AS1Q8NBZ9 246 aa12.02□□□□□ -0.49
COMMD4-215ENST00000566843 TOMM6Q96B49 74 aa12.02□□□□□ -0.49
COMMD4-215ENST00000566843 HIF1ANQ9NWT6 349 aa12.02□□□□□ -0.49
COMMD4-215ENST00000566843 TPRP12270 2363 aaKnown RBP12.01□□□□□ -0.49
COMMD4-215ENST00000566843 CD3EP07766 207 aa12.01□□□□□ -0.49
COMMD4-215ENST00000566843 PRORYQ9H606 182 aa12.01□□□□□ -0.49
COMMD4-215ENST00000566843 UFC1Q9Y3C8 167 aa12.01□□□□□ -0.49
COMMD4-215ENST00000566843 RP1L1Q8IWN7 2480 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms