RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 TTC32Q5I0X7 151 aa11.55□□□□□ -0.56
TSR3-202ENST00000566296 SSX7Q7RTT5 188 aa11.55□□□□□ -0.56
TSR3-202ENST00000566296 MBD3L1Q8WWY6 194 aa11.55□□□□□ -0.56
TSR3-202ENST00000566296 FXYD5Q96DB9 178 aa11.55□□□□□ -0.56
TSR3-202ENST00000566296 ZNF503Q96F45 646 aa11.55□□□□□ -0.56
TSR3-202ENST00000566296 SLC50A1Q9BRV3 221 aa11.55□□□□□ -0.56
TSR3-202ENST00000566296 MAP1LC3BQ9GZQ8 125 aa11.55□□□□□ -0.56
TSR3-202ENST00000566296 NOP10Q9NPE3 64 aaKnown RBP11.55□□□□□ -0.56
TSR3-202ENST00000566296 ZNF586Q9NXT0 402 aa11.55□□□□□ -0.56
TSR3-202ENST00000566296 TRBV19A0A075B6N1 114 aa11.54□□□□□ -0.56
TSR3-202ENST00000566296 H7BYZ3 331 aa11.54□□□□□ -0.56
TSR3-202ENST00000566296 H2AFB1P0C5Y9 115 aa11.54□□□□□ -0.56
TSR3-202ENST00000566296 OR10J4P0C629 311 aa11.54□□□□□ -0.56
TSR3-202ENST00000566296 NBEAP1P0C6P0 100 aa11.54□□□□□ -0.56
TSR3-202ENST00000566296 FAM74A1Q5RGS3 127 aa11.54□□□□□ -0.56
TSR3-202ENST00000566296 TEX261Q6UWH6 196 aa11.54□□□□□ -0.56
TSR3-202ENST00000566296 MAPKAPK5-AS1Q8N8E1 139 aa11.54□□□□□ -0.56
TSR3-202ENST00000566296 RNASE8Q8TDE3 154 aaKnown RBP11.54□□□□□ -0.56
TSR3-202ENST00000566296 C20orf144Q9BQM9 153 aa11.54□□□□□ -0.56
TSR3-202ENST00000566296 TMEM167BQ9NRX6 74 aa11.54□□□□□ -0.56
TSR3-202ENST00000566296 CCDC28AQ8IWP9 274 aa11.53□□□□□ -0.56
TSR3-202ENST00000566296 SAT2Q96F10 170 aaPredicted RBP11.53□□□□□ -0.56
TSR3-202ENST00000566296 TEX46H3BTG2 121 aa11.52□□□□□ -0.57
TSR3-202ENST00000566296 IFNA7P01567 189 aa11.52□□□□□ -0.57
TSR3-202ENST00000566296 SNRPCP09234 159 aaKnown RBP11.52□□□□□ -0.57
TSR3-202ENST00000566296 PRB4P10163 310 aaPredicted RBP11.52□□□□□ -0.57
TSR3-202ENST00000566296 GCHFRP30047 84 aa11.52□□□□□ -0.57
TSR3-202ENST00000566296 OR5I1Q13606 314 aa11.52□□□□□ -0.57
TSR3-202ENST00000566296 SFT2D1Q8WV19 159 aa11.52□□□□□ -0.57
TSR3-202ENST00000566296 BLNKQ8WV28 456 aa11.52□□□□□ -0.57
TSR3-202ENST00000566296 ZNF331Q9NQX6 463 aaPredicted RBP11.52□□□□□ -0.57
TSR3-202ENST00000566296 H3BTX0 84 aa11.51□□□□□ -0.57
TSR3-202ENST00000566296 BLOC1S1P78537 153 aa11.51□□□□□ -0.57
TSR3-202ENST00000566296 IQCF2Q8IXL9 164 aa11.51□□□□□ -0.57
TSR3-202ENST00000566296 LYPD1Q8N2G4 141 aa11.51□□□□□ -0.57
TSR3-202ENST00000566296 ZNF680Q8NEM1 530 aa11.51□□□□□ -0.57
TSR3-202ENST00000566296 SUN5Q8TC36 379 aa11.51□□□□□ -0.57
TSR3-202ENST00000566296 AAMDCQ9H7C9 122 aa11.51□□□□□ -0.57
TSR3-202ENST00000566296 Q9H8V8 135 aa11.51□□□□□ -0.57
TSR3-202ENST00000566296 TRAV26-1A0A087WT03 109 aa11.5□□□□□ -0.57
TSR3-202ENST00000566296 TRAV1-1A0A0B4J248 108 aa11.5□□□□□ -0.57
TSR3-202ENST00000566296 SNURFLB1AK76 121 aa11.5□□□□□ -0.57
TSR3-202ENST00000566296 SLC17A3O00476 420 aa11.5□□□□□ -0.57
TSR3-202ENST00000566296 NDUFB4O95168 129 aa11.5□□□□□ -0.57
TSR3-202ENST00000566296 FGF8P55075 233 aaPredicted RBP11.5□□□□□ -0.57
TSR3-202ENST00000566296 SPATA12Q7Z6I5 190 aa11.5□□□□□ -0.57
TSR3-202ENST00000566296 RXFP4Q8TDU9 374 aa11.5□□□□□ -0.57
TSR3-202ENST00000566296 A0A0J9YY99 117 aa11.49□□□□□ -0.57
TSR3-202ENST00000566296 GFI1BQ5VTD9 330 aa11.49□□□□□ -0.57
TSR3-202ENST00000566296 LINC00612Q8N6U2 182 aa11.49□□□□□ -0.57
TSR3-202ENST00000566296 PRELID1Q9Y255 219 aa11.49□□□□□ -0.57
TSR3-202ENST00000566296 GAGE12BA1L429 117 aa11.48□□□□□ -0.57
TSR3-202ENST00000566296 GAGE7O76087 117 aa11.48□□□□□ -0.57
TSR3-202ENST00000566296 GAGE12FP0CL80 117 aa11.48□□□□□ -0.57
TSR3-202ENST00000566296 GAGE12GP0CL81 117 aa11.48□□□□□ -0.57
TSR3-202ENST00000566296 GAGE12IP0CL82 117 aa11.48□□□□□ -0.57
TSR3-202ENST00000566296 PPT1P50897 306 aa11.48□□□□□ -0.57
TSR3-202ENST00000566296 RANP62826 216 aaKnown RBP11.48□□□□□ -0.57
TSR3-202ENST00000566296 MRPL53Q96EL3 112 aaKnown RBP11.48□□□□□ -0.57
TSR3-202ENST00000566296 UPK3BQ9BT76 320 aa11.48□□□□□ -0.57
TSR3-202ENST00000566296 Q9H3A6 140 aa11.48□□□□□ -0.57
TSR3-202ENST00000566296 TMPRSS5Q9H3S3 457 aa11.48□□□□□ -0.57
TSR3-202ENST00000566296 A0A1B0GV50 99 aa11.47□□□□□ -0.57
TSR3-202ENST00000566296 A0A1W2PRE2 83 aa11.47□□□□□ -0.57
TSR3-202ENST00000566296 J3KRW8 73 aa11.47□□□□□ -0.57
TSR3-202ENST00000566296 LEPP41159 167 aa11.47□□□□□ -0.57
TSR3-202ENST00000566296 KIR3DS1Q14943 382 aa11.47□□□□□ -0.57
TSR3-202ENST00000566296 OTORQ9NRC9 128 aa11.47□□□□□ -0.57
TSR3-202ENST00000566296 ARL2-SNX15V9GYD0 113 aa11.47□□□□□ -0.57
TSR3-202ENST00000566296 A0A1W2PPQ1 181 aa11.46□□□□□ -0.57
TSR3-202ENST00000566296 ICAM4Q14773 271 aa11.46□□□□□ -0.57
TSR3-202ENST00000566296 EXOC3-AS1Q8N2X6 119 aa11.46□□□□□ -0.57
TSR3-202ENST00000566296 ODF3Q96PU9 254 aa11.46□□□□□ -0.57
TSR3-202ENST00000566296 KRTAP1-5Q9BYS1 174 aa11.46□□□□□ -0.57
TSR3-202ENST00000566296 NKX6-2Q9C056 277 aaPredicted RBP11.46□□□□□ -0.57
TSR3-202ENST00000566296 MRPS16Q9Y3D3 137 aaKnown RBP11.46□□□□□ -0.57
TSR3-202ENST00000566296 PRAC2D3DTV9 90 aa11.45□□□□□ -0.58
TSR3-202ENST00000566296 H3BNG1 76 aa11.45□□□□□ -0.58
TSR3-202ENST00000566296 BTF3P20290 206 aaKnown RBP11.45□□□□□ -0.58
TSR3-202ENST00000566296 HOXA5P20719 270 aa11.45□□□□□ -0.58
TSR3-202ENST00000566296 CSN1S1P47710 185 aa11.45□□□□□ -0.58
TSR3-202ENST00000566296 Q8N1X5 172 aa11.45□□□□□ -0.58
TSR3-202ENST00000566296 ARL6IP6Q8N6S5 226 aa11.45□□□□□ -0.58
TSR3-202ENST00000566296 LYPD6BQ8NI32 183 aa11.45□□□□□ -0.58
TSR3-202ENST00000566296 PYGO2Q9BRQ0 406 aa11.45□□□□□ -0.58
TSR3-202ENST00000566296 MANBALQ9NQG1 85 aa11.45□□□□□ -0.58
TSR3-202ENST00000566296 PGPA6NDG6 321 aa11.44□□□□□ -0.58
TSR3-202ENST00000566296 FAM74A7A6NL05 159 aa11.44□□□□□ -0.58
TSR3-202ENST00000566296 IFNA1P01562 189 aa11.44□□□□□ -0.58
TSR3-202ENST00000566296 CMTM2Q8TAZ6 248 aa11.44□□□□□ -0.58
TSR3-202ENST00000566296 TRAV12-3A0A0B4J271 114 aa11.43□□□□□ -0.58
TSR3-202ENST00000566296 M0R3E3 92 aa11.43□□□□□ -0.58
TSR3-202ENST00000566296 UBE2G2P60604 165 aa11.43□□□□□ -0.58
TSR3-202ENST00000566296 CCL20P78556 96 aa11.43□□□□□ -0.58
TSR3-202ENST00000566296 ESRGQ1W209 222 aa11.43□□□□□ -0.58
TSR3-202ENST00000566296 C5orf17Q8NAS9 161 aa11.43□□□□□ -0.58
TSR3-202ENST00000566296 SCRT2Q9NQ03 307 aa11.43□□□□□ -0.58
TSR3-202ENST00000566296 GNG13Q9P2W3 67 aa11.43□□□□□ -0.58
TSR3-202ENST00000566296 GGTLC3B5MD39 225 aa11.42□□□□□ -0.58
TSR3-202ENST00000566296 NPIPB6E9PJ23 425 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms