RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	S100A7	P31151	101 aa		10.14	□□□□□ -0.79
SCAPER-215	ENST00000565507	VAMP3	Q15836	100 aa		10.14	□□□□□ -0.79
SCAPER-215	ENST00000565507	LINC01546	A6NGU7	62 aa		10.13	□□□□□ -0.79
SCAPER-215	ENST00000565507	SAA4	P35542	130 aa		10.13	□□□□□ -0.79
SCAPER-215	ENST00000565507	RAB9A	P51151	201 aa		10.13	□□□□□ -0.79
SCAPER-215	ENST00000565507	IL17REL	Q6ZVW7	336 aa		10.13	□□□□□ -0.79
SCAPER-215	ENST00000565507		G3V318	75 aa		10.13	□□□□□ -0.79
SCAPER-215	ENST00000565507	OR1N2	Q8NGR9	330 aa		10.13	□□□□□ -0.79
SCAPER-215	ENST00000565507	IFI27L1	Q96BM0	104 aa		10.13	□□□□□ -0.79
SCAPER-215	ENST00000565507	CBY1	Q9Y3M2	126 aa		10.13	□□□□□ -0.79
SCAPER-215	ENST00000565507	CSPG4	Q6UVK1	2322 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	IGHV3-66	A0A0C4DH42	116 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	CLEC19A	Q6UXS0	136 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	BOD1L2	Q8IYS8	172 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	BPESC1	Q9GZL8	116 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	C11orf21	Q9P2W6	132 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.12	□□□□□ -0.79	3e-19	■■■■■ 37.9
SCAPER-215	ENST00000565507	NAV2	Q8IVL1	2488 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	TRAV8-2	A0A0B4J237	113 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	IGKV3D-20	A0A0C4DH25	116 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	PPBP	P02775	128 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	OR4C5	Q8NGB2	326 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	SLC50A1	Q9BRV3	221 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	AGPAT4-IT1	Q9H0P7	198 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	APC	P25054	2843 aa		10.12	□□□□□ -0.79
SCAPER-215	ENST00000565507	TMEM8B	A6NDV4	472 aa		10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	GOSR1	O95249	250 aa		10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	RBX1	P62877	108 aa		10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	HELZ2	Q9BYK8	2649 aa	Known RBP	10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	MXRA5	Q9NR99	2828 aa		10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	IGHV3OR16-13	A0A075B7E8	117 aa		10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	IGHV3-74	A0A0B4J1X5	117 aa		10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	CENPVL3	A0A0U1RRI6	287 aa		10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	CBY3	A6NI87	242 aa		10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	PPIF	P30405	207 aa	Known RBP	10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	LMO4	P61968	165 aa		10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	TMEM97	Q5BJF2	176 aa		10.11	□□□□□ -0.79
SCAPER-215	ENST00000565507	MAP1LC3A	Q9H492	121 aa		10.1	□□□□□ -0.79
SCAPER-215	ENST00000565507	TLN2	Q9Y4G6	2542 aa		10.1	□□□□□ -0.79
SCAPER-215	ENST00000565507	TNFRSF6B	O95407	300 aa		10.1	□□□□□ -0.79
SCAPER-215	ENST00000565507	IGHV4-39	P01824	125 aa		10.1	□□□□□ -0.79
SCAPER-215	ENST00000565507	AMMECR1L	Q6DCA0	310 aa		10.1	□□□□□ -0.79
SCAPER-215	ENST00000565507		A1L4Q6	167 aa		10.09	□□□□□ -0.79
SCAPER-215	ENST00000565507	EFNA4	P52798	201 aa		10.09	□□□□□ -0.79
SCAPER-215	ENST00000565507	WFDC3	Q8IUB2	231 aa		10.09	□□□□□ -0.79
SCAPER-215	ENST00000565507	DKK2	Q9UBU2	259 aa		10.09	□□□□□ -0.79
SCAPER-215	ENST00000565507		U3KQE9	123 aa		10.09	□□□□□ -0.79
SCAPER-215	ENST00000565507	TRAV8-6	A0A0B4J262	113 aa		10.09	□□□□□ -0.79
SCAPER-215	ENST00000565507	GATA1	P15976	413 aa	Predicted RBP	10.09	□□□□□ -0.79
SCAPER-215	ENST00000565507	SEC11A	P67812	179 aa		10.09	□□□□□ -0.79
SCAPER-215	ENST00000565507	CCDC168	Q8NDH2	2452 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	IGHV3-49	A0A0A0MS15	119 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	TRBV7-1	A0A0A6YYK4	115 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	SMAD7	O15105	426 aa	Known RBP	10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	TCTA	P57738	103 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	C5orf56	Q8N8D9	126 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	EEF1AKMT3	Q96AZ1	226 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	C7orf71	A4D174	169 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	ZNF207	O43670	478 aa	Known RBP	10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	EVI2A	P22794	236 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	FCER1G	P30273	86 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	LEP	P41159	167 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	ADAMTSL5	Q6ZMM2	481 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	C8orf86	Q6ZUL3	223 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	MRPL53	Q96EL3	112 aa	Known RBP	10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	C18orf15	Q96N68	181 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	NXT2	Q9NPJ8	142 aa	Known RBP	10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	CUBN	O60494	3623 aa		10.08	□□□□□ -0.8
SCAPER-215	ENST00000565507	IGLV2-18	A0A075B6J9	118 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	IGHV7-4-1	A0A0J9YVY3	117 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	NPFF	O15130	113 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	PCP2	Q8IVA1	136 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	ZMAT4	Q9H898	229 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	SIVA1	O15304	175 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	TRGV3	P03979	118 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507		Q6ZQT7	251 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	C9orf47	Q6ZRZ4	202 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	OR9G4	Q8NGQ1	327 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	PIFO	Q8TCI5	191 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	METTL26	Q96S19	204 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	PEF1	Q9UBV8	284 aa	Known RBP	10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	TEX15	Q9BXT5	2789 aa		10.07	□□□□□ -0.8
SCAPER-215	ENST00000565507	IGHV3OR16-10	A0A075B7F0	116 aa		10.06	□□□□□ -0.8
SCAPER-215	ENST00000565507	ODF1	Q14990	250 aa		10.06	□□□□□ -0.8
SCAPER-215	ENST00000565507	C19orf54	Q5BKX5	351 aa		10.06	□□□□□ -0.8
SCAPER-215	ENST00000565507	ZNF843	Q8N446	348 aa		10.06	□□□□□ -0.8
SCAPER-215	ENST00000565507	HHLA3	Q9XRX5	114 aa		10.06	□□□□□ -0.8
SCAPER-215	ENST00000565507	TMEM78	Q5T7P6	136 aa		10.06	□□□□□ -0.8
SCAPER-215	ENST00000565507	DOPEY2	Q9Y3R5	2298 aa		10.06	□□□□□ -0.8
SCAPER-215	ENST00000565507	HIF1AN	Q9NWT6	349 aa		10.05	□□□□□ -0.8
SCAPER-215	ENST00000565507		Q8N8P6	123 aa		10.05	□□□□□ -0.8
SCAPER-215	ENST00000565507	NMU	P48645	174 aa		10.04	□□□□□ -0.8
SCAPER-215	ENST00000565507	ATP5G2	Q06055	141 aa		10.04	□□□□□ -0.8
SCAPER-215	ENST00000565507	HSD52	Q0P140	79 aa		10.04	□□□□□ -0.8
SCAPER-215	ENST00000565507	TMEM219	Q86XT9	240 aa		10.04	□□□□□ -0.8
SCAPER-215	ENST00000565507	NRAC	Q8N912	160 aa		10.04	□□□□□ -0.8
SCAPER-215	ENST00000565507	ITPR2	Q14571	2701 aa		10.04	□□□□□ -0.8
SCAPER-215	ENST00000565507	IGHV4-4	A0A075B6R2	117 aa		10.04	□□□□□ -0.8
SCAPER-215	ENST00000565507	PRSS47	A8MTI9	375 aa		10.04	□□□□□ -0.8

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