RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 S100ZQ8WXG8 99 aa16.35■□□□□ 0.21
NME3-206ENST00000564252 ARPC5LQ9BPX5 153 aa16.35■□□□□ 0.21
NME3-206ENST00000564252 PRO0255Q9UI72 69 aa16.35■□□□□ 0.21
NME3-206ENST00000564252 NXPH4O95158 308 aa16.34■□□□□ 0.21
NME3-206ENST00000564252 RBAKDNA6NC62 111 aa16.33■□□□□ 0.2
NME3-206ENST00000564252 OR7C2O60412 319 aa16.33■□□□□ 0.2
NME3-206ENST00000564252 CRYBA4P53673 196 aa16.33■□□□□ 0.2
NME3-206ENST00000564252 ZNF415Q09FC8 603 aa16.33■□□□□ 0.2
NME3-206ENST00000564252 FHL2Q14192 279 aa16.33■□□□□ 0.2
NME3-206ENST00000564252 C17orf112F2Z3M2 114 aa16.32■□□□□ 0.2
NME3-206ENST00000564252 RANP62826 216 aaKnown RBP16.32■□□□□ 0.2
NME3-206ENST00000564252 SLAQ13239 276 aa16.32■□□□□ 0.2
NME3-206ENST00000564252 ZNF266Q14584 549 aa16.32■□□□□ 0.2
NME3-206ENST00000564252 C8orf49Q96NF6 230 aa16.32■□□□□ 0.2
NME3-206ENST00000564252 HHLA3Q9XRX5 114 aa16.32■□□□□ 0.2
NME3-206ENST00000564252 UPK1BO75841 260 aa16.31■□□□□ 0.2
NME3-206ENST00000564252 CSN1S1P47710 185 aa16.31■□□□□ 0.2
NME3-206ENST00000564252 CYCSP99999 105 aaKnown RBP16.31■□□□□ 0.2
NME3-206ENST00000564252 LYPD1Q8N2G4 141 aa16.31■□□□□ 0.2
NME3-206ENST00000564252 PRAF2O60831 178 aa16.3■□□□□ 0.2
NME3-206ENST00000564252 H2BFSP57053 126 aa16.3■□□□□ 0.2
NME3-206ENST00000564252 MUC21Q5SSG8 566 aa16.3■□□□□ 0.2
NME3-206ENST00000564252 LYPD5Q6UWN5 251 aa16.3■□□□□ 0.2
NME3-206ENST00000564252 ATP5SQ99766 215 aa16.3■□□□□ 0.2
NME3-206ENST00000564252 MDFICQ9P1T7 246 aa16.3■□□□□ 0.2
NME3-206ENST00000564252 UBE2L3P68036 154 aaKnown RBP16.29■□□□□ 0.2
NME3-206ENST00000564252 MRPL23Q16540 153 aaKnown RBP16.29■□□□□ 0.2
NME3-206ENST00000564252 Q6AWC8 147 aa16.29■□□□□ 0.2
NME3-206ENST00000564252 PPP1R1CQ8WVI7 109 aa16.29■□□□□ 0.2
NME3-206ENST00000564252 SCRT2Q9NQ03 307 aa16.29■□□□□ 0.2
NME3-206ENST00000564252 IFITM3Q01628 133 aa16.28■□□□□ 0.2
NME3-206ENST00000564252 FFAR4Q5NUL3 377 aa16.28■□□□□ 0.2
NME3-206ENST00000564252 DIRC3C9JPN6 131 aa16.27■□□□□ 0.2
NME3-206ENST00000564252 INMT-MINDY4F8WBC2 141 aa16.27■□□□□ 0.2
NME3-206ENST00000564252 NEGR1Q7Z3B1 354 aa16.27■□□□□ 0.2
NME3-206ENST00000564252 HSPB11Q9Y547 144 aa16.27■□□□□ 0.2
NME3-206ENST00000564252 LENEPQ9Y5L5 61 aa16.27■□□□□ 0.2
NME3-206ENST00000564252 TNFRSF18Q9Y5U5 241 aa16.27■□□□□ 0.2
NME3-206ENST00000564252 SFTA3P0C7M3 94 aa16.26■□□□□ 0.19
NME3-206ENST00000564252 KHDC3LQ587J8 217 aa16.26■□□□□ 0.19
NME3-206ENST00000564252 IQCF2Q8IXL9 164 aa16.26■□□□□ 0.19
NME3-206ENST00000564252 OR10G4Q8NGN3 311 aa16.26■□□□□ 0.19
NME3-206ENST00000564252 ZNF479Q96JC4 524 aa16.26■□□□□ 0.19
NME3-206ENST00000564252 TRGV4A0A0C4DH28 118 aa16.25■□□□□ 0.19
NME3-206ENST00000564252 MPC2O95563 127 aa16.25■□□□□ 0.19
NME3-206ENST00000564252 TMEM183BQ1AE95 376 aa16.25■□□□□ 0.19
NME3-206ENST00000564252 TMEM183AQ8IXX5 376 aa16.25■□□□□ 0.19
NME3-206ENST00000564252 RASL10AQ92737 203 aa16.25■□□□□ 0.19
NME3-206ENST00000564252 K7EQD1 137 aa16.24■□□□□ 0.19
NME3-206ENST00000564252 EIF3GO75821 320 aaKnown RBP eCLIP16.24■□□□□ 0.19
NME3-206ENST00000564252 TAS2R45P59539 299 aa16.24■□□□□ 0.19
NME3-206ENST00000564252 FAM159AQ6UWV7 190 aa16.24■□□□□ 0.19
NME3-206ENST00000564252 TMED6Q8WW62 240 aa16.24■□□□□ 0.19
NME3-206ENST00000564252 MARVELD1Q9BSK0 173 aa16.24■□□□□ 0.19
NME3-206ENST00000564252 SPXQ9BT56 116 aa16.24■□□□□ 0.19
NME3-206ENST00000564252 TRGV11A0A075B6L2 103 aa16.23■□□□□ 0.19
NME3-206ENST00000564252 ERVFC1-1P60608 527 aa16.23■□□□□ 0.19
NME3-206ENST00000564252 HYLS1Q96M11 299 aa16.23■□□□□ 0.19
NME3-206ENST00000564252 SMIM3Q9BZL3 60 aa16.23■□□□□ 0.19
NME3-206ENST00000564252 PGPEP1Q9NXJ5 209 aa16.23■□□□□ 0.19
NME3-206ENST00000564252 IFNA5P01569 189 aa16.22■□□□□ 0.19
NME3-206ENST00000564252 RPL12P30050 165 aaKnown RBP16.22■□□□□ 0.19
NME3-206ENST00000564252 SRIP30626 198 aa16.22■□□□□ 0.19
NME3-206ENST00000564252 FUSP35637 526 aaKnown RBP eCLIP16.22■□□□□ 0.19
NME3-206ENST00000564252 TDRG1Q3Y452 100 aa16.22■□□□□ 0.19
NME3-206ENST00000564252 NFE4Q86UQ8 179 aa16.22■□□□□ 0.19
NME3-206ENST00000564252 SCGB1C1Q8TD33 95 aa16.22■□□□□ 0.19
NME3-206ENST00000564252 OTORQ9NRC9 128 aa16.22■□□□□ 0.19
NME3-206ENST00000564252 EREGO14944 169 aa16.21■□□□□ 0.19
NME3-206ENST00000564252 PET100P0DJ07 73 aa16.21■□□□□ 0.19
NME3-206ENST00000564252 GYPEP15421 78 aa16.21■□□□□ 0.19
NME3-206ENST00000564252 WFDC10BQ8IUB3 73 aa16.21■□□□□ 0.19
NME3-206ENST00000564252 LY96Q9Y6Y9 160 aa16.21■□□□□ 0.19
NME3-206ENST00000564252 FAT1Q14517 4588 aa16.2■□□□□ 0.18
NME3-206ENST00000564252 TRAV9-2A0A087WT02 112 aa16.2■□□□□ 0.18
NME3-206ENST00000564252 PGPA6NDG6 321 aa16.2■□□□□ 0.18
NME3-206ENST00000564252 PCNPQ8WW12 178 aaKnown RBP16.2■□□□□ 0.18
NME3-206ENST00000564252 WFDC1Q9HC57 220 aa16.2■□□□□ 0.18
NME3-206ENST00000564252 MBD2Q9UBB5 411 aa16.2■□□□□ 0.18
NME3-206ENST00000564252 NAGKQ9UJ70 344 aa16.2■□□□□ 0.18
NME3-206ENST00000564252 TRAV4A0A0B4J268 109 aa16.19■□□□□ 0.18
NME3-206ENST00000564252 SSNA1O43805 119 aa16.19■□□□□ 0.18
NME3-206ENST00000564252 ORM1P02763 201 aa16.19■□□□□ 0.18
NME3-206ENST00000564252 CDPF1Q6NVV7 123 aa16.19■□□□□ 0.18
NME3-206ENST00000564252 RPH3ALQ9UNE2 315 aa16.19■□□□□ 0.18
NME3-206ENST00000564252 IGHV3-16A0A0C4DH30 117 aa16.18■□□□□ 0.18
NME3-206ENST00000564252 GNRH2O43555 120 aa16.18■□□□□ 0.18
NME3-206ENST00000564252 DNAH10OSP0CZ25 163 aa16.18■□□□□ 0.18
NME3-206ENST00000564252 CMTM2Q8TAZ6 248 aa16.18■□□□□ 0.18
NME3-206ENST00000564252 A0A087WTM6 91 aa16.17■□□□□ 0.18
NME3-206ENST00000564252 K7EP13 123 aa16.17■□□□□ 0.18
NME3-206ENST00000564252 FAM74A1Q5RGS3 127 aa16.17■□□□□ 0.18
NME3-206ENST00000564252 PQLC2Q6ZP29 291 aa16.17■□□□□ 0.18
NME3-206ENST00000564252 GOLT1AQ6ZVE7 132 aa16.17■□□□□ 0.18
NME3-206ENST00000564252 ARL6IP6Q8N6S5 226 aa16.17■□□□□ 0.18
NME3-206ENST00000564252 TVP23CQ96ET8 276 aa16.17■□□□□ 0.18
NME3-206ENST00000564252 VPS13BQ7Z7G8 4022 aa16.17■□□□□ 0.18
NME3-206ENST00000564252 C9JCJ5 164 aa16.16■□□□□ 0.18
NME3-206ENST00000564252 M0R2P5 195 aa16.16■□□□□ 0.18
NME3-206ENST00000564252 ACOT6Q3I5F7 207 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms