RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 TRAV8-1A0A0A6YYK1 113 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 CGB1A6NKQ9 187 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 NDUFB3O43676 98 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 DPM2O94777 84 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 FCER1GP30273 86 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 SYT8Q8NBV8 401 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 IGFBPL1Q8WX77 278 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 C20orf78Q9BR46 151 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 RPUSD1Q9UJJ7 312 aaKnown RBP8.66□□□□□ -1.02
TCF4-222ENST00000564228 FBN2P35556 2912 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 ASH1LQ9NR48 2969 aaKnown RBP8.66□□□□□ -1.02
TCF4-222ENST00000564228 TNFRSF13BO14836 293 aaPredicted RBP8.66□□□□□ -1.02
TCF4-222ENST00000564228 FCN3O75636 299 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 IGHV4-39P01824 125 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 TWIST1Q15672 202 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 HIST2H2BCQ6DN03 193 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 Q6ZUT4 128 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 AMN1Q8IY45 258 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 LYPD1Q8N2G4 141 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 PSMG3-AS1Q96PY0 264 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 KAAG1Q9UBP8 84 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 HIGD1AQ9Y241 93 aa8.66□□□□□ -1.02
TCF4-222ENST00000564228 INSL3P51460 131 aa8.65□□□□□ -1.02
TCF4-222ENST00000564228 MAP1LC3AQ9H492 121 aa8.65□□□□□ -1.02
TCF4-222ENST00000564228 PSG8Q9UQ74 426 aa8.65□□□□□ -1.02
TCF4-222ENST00000564228 MAP1AP78559 2803 aaPredicted RBP8.65□□□□□ -1.03
TCF4-222ENST00000564228 E7EUB6 86 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 NPYP01303 97 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 ATP5J2P56134 94 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 CFAP126Q5VTH2 177 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 LYZL1Q6UWQ5 148 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 TMEM158Q8WZ71 300 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 NXT2Q9NPJ8 142 aaKnown RBP8.64□□□□□ -1.03
TCF4-222ENST00000564228 TRBV7-3A0A075B6L6 115 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 CKS2P33552 79 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 CRIP1P50238 77 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 KRTAP10-9P60411 292 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 GAGE5Q13069 117 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 GAGE6Q13070 117 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 TMEM155Q4W5P6 130 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 RNF183Q96D59 192 aa8.64□□□□□ -1.03
TCF4-222ENST00000564228 MRPL20Q9BYC9 149 aaKnown RBP8.64□□□□□ -1.03
TCF4-222ENST00000564228 TMEM213A2RRL7 107 aa8.63□□□□□ -1.03
TCF4-222ENST00000564228 MT-ATP8P03928 68 aa8.63□□□□□ -1.03
TCF4-222ENST00000564228 AMTNQ6UX39 209 aa8.63□□□□□ -1.03
TCF4-222ENST00000564228 COX8CQ7Z4L0 72 aa8.63□□□□□ -1.03
TCF4-222ENST00000564228 OR4C13Q8NGP0 309 aa8.63□□□□□ -1.03
TCF4-222ENST00000564228 DLX4Q92988 240 aaPredicted RBP8.63□□□□□ -1.03
TCF4-222ENST00000564228 BPESC1Q9GZL8 116 aa8.63□□□□□ -1.03
TCF4-222ENST00000564228 ZFAND3Q9H8U3 227 aa8.63□□□□□ -1.03
TCF4-222ENST00000564228 CSMD2Q7Z408 3487 aa8.63□□□□□ -1.03
TCF4-222ENST00000564228 H3BTX0 84 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 IGHV3-48P01763 117 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 FXYD7P58549 80 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 ZC2HC1BQ5TFG8 222 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 Q71RC1 249 aaPredicted RBP8.62□□□□□ -1.03
TCF4-222ENST00000564228 EXOC3-AS1Q8N2X6 119 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 PPDPFLQ8WWR9 84 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 TPPP3Q9BW30 176 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 TTTY13Q9BZ97 58 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 APCP25054 2843 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 TRBV19A0A075B6N1 114 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 A0A1W2PPI3 338 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 PRSS1P07477 247 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 CCL3L1P16619 93 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 LEPP41159 167 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 XGP55808 180 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 LYRM7Q5U5X0 104 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 TMEM200BQ69YZ2 307 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 GTSCR1Q86UQ5 136 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 HIST1H4GQ99525 98 aa8.62□□□□□ -1.03
TCF4-222ENST00000564228 IGLV2-23P01705 113 aa8.61□□□□□ -1.03
TCF4-222ENST00000564228 C10orf55Q5SWW7 151 aa8.61□□□□□ -1.03
TCF4-222ENST00000564228 SIGLEC15Q6ZMC9 328 aa8.61□□□□□ -1.03
TCF4-222ENST00000564228 FOXC2Q99958 501 aa8.61□□□□□ -1.03
TCF4-222ENST00000564228 ANAPC13Q9BS18 74 aa8.61□□□□□ -1.03
TCF4-222ENST00000564228 NBPF19A0A087WUL8 3843 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
TCF4-222ENST00000564228 SRSF2Q01130 221 aaKnown RBP8.6□□□□□ -1.03
TCF4-222ENST00000564228 VMA21Q3ZAQ7 101 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 MORN3Q6PF18 240 aaPredicted RBP8.6□□□□□ -1.03
TCF4-222ENST00000564228 PIMREGQ9BSJ6 248 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 TMEM133Q9H2Q1 129 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 NAV2Q8IVL1 2488 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 ABCA2Q9BZC7 2435 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 NAV3Q8IVL0 2385 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 SH2D1AO60880 128 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 IL4P05112 153 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 PLGLAQ15195 96 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 WFDC3Q8IUB2 231 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 MAPKAPK5-AS1Q8N8E1 139 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 FAM110AQ9BQ89 295 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 SS18L2Q9UHA2 77 aa8.6□□□□□ -1.03
TCF4-222ENST00000564228 VPS13CQ709C8 3753 aa8.59□□□□□ -1.03
TCF4-222ENST00000564228 AGRNO00468 2067 aa8.59□□□□□ -1.03
TCF4-222ENST00000564228 NCBP2LA6PVI3 153 aaKnown RBP8.59□□□□□ -1.03
TCF4-222ENST00000564228 TMEM262E9PQX1 116 aa8.59□□□□□ -1.03
TCF4-222ENST00000564228 HOXA3O43365 443 aaPredicted RBP8.59□□□□□ -1.03
TCF4-222ENST00000564228 IGLC6P0CF74 106 aa8.59□□□□□ -1.03
TCF4-222ENST00000564228 GATA3P23771 443 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms