RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 GNG13Q9P2W3 67 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 ANAPC10Q9UM13 185 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 MAST2Q6P0Q8 1798 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 CPAMD8Q8IZJ3 1885 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 PTPRBP23467 1997 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 SNRNP200O75643 2136 aaKnown RBP2.68□□□□□ -1.98
GDE1-202ENST00000563645 SIP14410 1827 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 KCPQ6ZWJ8 1503 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 KMT2EQ8IZD2 1858 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 LOC285556D6RIA3 1793 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 BCORQ6W2J9 1755 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 DLEC1Q9Y238 1755 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 DUOX1Q9NRD9 1551 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 IGHV1-24A0A0C4DH33 117 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 TCRBV4S1A1TA0A5B7 111 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 PGPA6NDG6 321 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 ZFP92A6NM28 416 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 CEBPZOSA8MTT3 80 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 K7ERJ3 54 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 M0R378 163 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 UPK2O00526 184 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 NDUFS5O43920 106 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 SLC25A16P16260 332 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 SNRPD3P62318 126 aaKnown RBP2.67□□□□□ -1.98
GDE1-202ENST00000563645 MRPS36P82909 103 aaKnown RBP2.67□□□□□ -1.98
GDE1-202ENST00000563645 ZNF117Q03924 483 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 GTF3C1Q12789 2109 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 DEFB121Q5J5C9 76 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 PSMG4Q5JS54 123 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 FAM222AQ5U5X8 452 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 SCGB1D4Q6XE38 83 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 RPS27LQ71UM5 84 aaKnown RBP2.67□□□□□ -1.98
GDE1-202ENST00000563645 ATP5L2Q7Z4Y8 100 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 VN1R4Q7Z5H5 301 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 ZNRF1Q8ND25 227 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 OR8A1Q8NGG7 326 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 FLVCR1-AS1Q8TAF5 88 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 PGLYRP4Q96LB8 373 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 NXT2Q9NPJ8 142 aaKnown RBP2.67□□□□□ -1.98
GDE1-202ENST00000563645 DHRS4-AS1Q9P1J3 65 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 LINC00527Q9UJ94 153 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 DOCK9Q9BZ29 2069 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 DOCK4Q8N1I0 1966 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 OBSL1O75147 1896 aa2.67□□□□□ -1.98
GDE1-202ENST00000563645 KIAA1671Q9BY89 1806 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 A0A0G2JMZ2 1700 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 LRRC37A2A6NM11 1700 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 LRRC37AA6NMS7 1700 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 RICTORQ6R327 1708 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 ANKRD12Q6UB98 2062 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 H3BP45 60 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 CCL16O15467 120 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 ZNF73O43830 326 aaPredicted RBP2.66□□□□□ -1.98
GDE1-202ENST00000563645 CST7O76096 145 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 HLA-DQA1P01909 254 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 GIG44P09565 113 aaPredicted RBP2.66□□□□□ -1.98
GDE1-202ENST00000563645 GCHFRP30047 84 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 PEBP1P30086 187 aaKnown RBP2.66□□□□□ -1.98
GDE1-202ENST00000563645 UBE2D3P61077 147 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 HERVK_113P61574 105 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 UBE2D2P62837 147 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 CACNG7P62955 275 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 IGLV3-21P80748 117 aaPredicted RBP2.66□□□□□ -1.98
GDE1-202ENST00000563645 MIC13Q5XKP0 118 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 ZFP2Q6ZN57 461 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 Q8N2B8 174 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 TMEM252Q8N6L7 170 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 SERP2Q8N6R1 65 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 TMEM230Q96A57 120 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 FXYD5Q96DB9 178 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 KRTAP4-3Q9BYR4 195 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 C11orf1Q9H5F2 150 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 ZNF286AQ9HBT8 521 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 NHP2Q9NX24 153 aaKnown RBP2.66□□□□□ -1.98
GDE1-202ENST00000563645 LINC00588Q9Y4M8 146 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 V9GY05 133 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 NRXN3Q9Y4C0 1643 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 STRCP1A6NGW2 1772 aa2.66□□□□□ -1.98
GDE1-202ENST00000563645 TRBV27A0A0K0K1C4 114 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 C19orf71A6NCJ1 209 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 RTL8CO15255 209 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 PIN1P1O15428 100 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 WISP3O95389 354 aaPredicted RBP2.65□□□□□ -1.99
GDE1-202ENST00000563645 DYNLT1P63172 113 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 UBE2L3P68036 154 aaKnown RBP2.65□□□□□ -1.99
GDE1-202ENST00000563645 SS18Q15532 418 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 TMEM170BQ5T4T1 132 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 LINC00173Q6ZV60 143 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 C6orf201Q7Z4U5 140 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 FAM19A3Q7Z5A8 133 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 MKXQ8IYA7 352 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 Q8N8P6 123 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 OR5C1Q8NGR4 320 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 CHCHD1Q96BP2 118 aaKnown RBP2.65□□□□□ -1.99
GDE1-202ENST00000563645 METTL26Q96S19 204 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 TRGV9Q99603 122 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 MGST2Q99735 147 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 SLC25A15Q9Y619 301 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 PTPRDP23468 1912 aa2.65□□□□□ -1.99
GDE1-202ENST00000563645 TIAM2Q8IVF5 1701 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms